Information report for PGSC0003DMP400027162
Gene Details
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Functional Annotation
- Refseq: XP_006346936.1 — PREDICTED: protein indeterminate-domain 2-like
- Swissprot: Q9LVQ7 — IDD1_ARATH; Zinc finger protein ENHYDROUS
- TrEMBL: M1B988 — M1B988_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400040064 — (Solanum tuberosum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PGSC0003DMP400027162|Solanum_tuberosum|C2H2|PGSC0003DMP400027162
ATGAATGATTGCGCGGGCTCTGGTGAAGTGAGTGTATTGTCTTCTGGTGAGCAGGCAGCTCCTTGTAAAGAAGCAGCAAAGAAAAAACGGAATCTCCCTGGAATGCCAGATCCTAATGCGGAAGTGGTAGCTTTGTCACCGAAAACTCTATTGGCAACGAACCGATTTGTGTGTGAAATTTGCAACAAAGGGTTTCAGAGAGACCAGAATTTGCAGCTTCATAGAAGAGGTCACAATCTGCCTTGGAAGCTAAGGCAGAGAGCAAGCAATGAGGTGAGGAAGAGAGTGTATGTTTGCCCCGAACTTACGTGTGTTCACCATGATCCTTCACGGGCATTAGGGGATTTGACTGGGATCAAGAAGCATTTTTGTAGGAAACACGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCAAAAAAGTATGCAGTTCAGTCTGATTTGAAGGCTCATTTGAAGATTTGTGGAACTAAAGAGTATAAATGTGATTGTGGGACTATGTTTTCAAGGAGGGATAGCTTTATCACACACAGGGCATTTTGTGATGTTTTAGCAAAAGATACTGAGAAAGCACAGAATGCAGTTACAACTCCTATTGCTGATGAGGACCATAAAGTTCAAGTTGTTGTTTCATCAACACCACAAACACCTCCTACGCCCCCACCATCCTTGGAGCCGCCAGCCGTTCCTTCACCAGCTGCCCTGGAGCCTCTACCACCTCCTGTTTCTCCGTCAACTGCTGTAGTGTCTTCTGATTCTCCCATCCAGAATCCAGAGAGTCCACACACAAATTCCAATGGAACTATTACTAAACAGGATATAGAAGAAACAACAGCAAAATCAAGCTTGTCTGGAATCTGCAGTAGTAGCTCATGCACCGGATGTACCAACAGCAACTGTTTTACAAGCTTGACTGGAATCTGCAGCAGCAGTTGGAGCTCAAGCAGTAATGGAAGTACCAGCAGCAGCAGCATTTTTCCAAGCTTGACTGGAATCTGTGGCAGCACTAGGAGCTCGAGCAGTAATGGAAGTACTGGCAGCATCAGCGTTTTCCCAAGCTTGTCTGGAATATGTAGCAATAGTAGGAGCTCAAGCAGTAATGGAAGTACCCACAGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATTTTTGCAAGTTCAACTGGAATCTATAGCAACAGCAGTAGCTCGAGCTGTAACAGAAGTACCAGCGGCAGCAGCATTTTTACAAGCTTGACTGGAATCTGTAGCAGCAGTAGTAACTCGAGCAGCAACAGAAGTGCCAGCAACAGCACTTTTGCAAGCTTATTTGCTTCATCAACAGCTTCAGGAAGTTTGCCGTCTCAAGCACCTCAATTTACGGATTGGTTTCAGTCCGTGGCTCCTGCACCACCACCTGATATAGAACCACCATCATCTATGGAACCAATATCTCTCTGCCTTGCCATGAATCATAGTTCATCAGTCTTTGGACCAGCTGGGCAAGAGAGAATTCAGTATGCTGCAGCACCACAACCATCCATGTCTGCAACAGCATTACTGCAGAAGGCTGCTCAGATGGGTGCAACAGCGACAAACTCATCATTGTTGAGGGGTCTTGGGATATTATCTTCTTCTTCATCATCTAGTGGGCAACACGAATGGAATGGGAGACAAATTGACACTGATGGTGCAACGTTGGCTGCAGGCCTTGGCCTTGGATTGCCATGTGATGATGGCTCTGGTCTAAAGGAACTGATGTTGGGAACTCCCTCTGTTTTCGGTCCCAAACATCCTACTCTTGACCTTCTTGGACTGGGGATGGCAGCTGGTGGAGGCTCAACACCTGGATTATCCGCTCTAATAACATCAATGGGCGGTAATCTAGATGTGGCTGCGGCAGCAGGACCGTTTGACAGTGGAGAATTTTGTGGGAAGGAGTTTGGAAGAAGTTCATGA
Protein Sequence:
- >PGSC0003DMP400027162|Solanum_tuberosum|C2H2|PGSC0003DMP400027162
MNDCAGSGEVSVLSSGEQAAPCKEAAKKKRNLPGMPDPNAEVVALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRASNEVRKRVYVCPELTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDLKAHLKICGTKEYKCDCGTMFSRRDSFITHRAFCDVLAKDTEKAQNAVTTPIADEDHKVQVVVSSTPQTPPTPPPSLEPPAVPSPAALEPLPPPVSPSTAVVSSDSPIQNPESPHTNSNGTITKQDIEETTAKSSLSGICSSSSCTGCTNSNCFTSLTGICSSSWSSSSNGSTSSSSIFPSLTGICGSTRSSSSNGSTGSISVFPSLSGICSNSRSSSSNGSTHSSSIFSSSTGICSSSIFPSSTGICSGSSIFSSSTGICSSSIFPSSTGICSGSSIFSSSTGICSSSIFPSSTGICSGSSIFSSSTGICSSSIFPSSTGICSGSSIFASSTGIYSNSSSSSCNRSTSGSSIFTSLTGICSSSSNSSSNRSASNSTFASLFASSTASGSLPSQAPQFTDWFQSVAPAPPPDIEPPSSMEPISLCLAMNHSSSVFGPAGQERIQYAAAPQPSMSATALLQKAAQMGATATNSSLLRGLGILSSSSSSSGQHEWNGRQIDTDGATLAAGLGLGLPCDDGSGLKELMLGTPSVFGPKHPTLDLLGLGMAAGGGSTPGLSALITSMGGNLDVAAAAGPFDSGEFCGKEFGRSS*