Information report for PDK_30s769691g001
Gene Details
|
|
Functional Annotation
- Refseq: XP_026660781.1 — LOW QUALITY PROTEIN: uncharacterized protein LOC103707977
- TrEMBL: A0A3Q0I1M2 — A0A3Q0I1M2_PHODC; LOW QUALITY PROTEIN: uncharacterized protein LOC103707977
- STRING: XP_008790938.1 — (Phoenix dactylifera)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn265511
- Arachis hypogaea: Ahy013212
- Brachypodium distachyon: Bradi3g38747.1.p, Bradi3g38747.3.p
- Cicer arietinum: XP_004485592.1, XP_004485591.1
- Glycine max: Glyma.15G054200.2.p, Glyma.15G054200.1.p
- Petunia inflata: Peinf101Scf00657g05024.1
- Prunus mume: XP_008237174.1, XP_008237173.1
- Prunus persica: Prupe.8G062800.1.p, Prupe.8G062800.2.p
- Ricinus communis: 29806.m000966
- Sesamum indicum: XP_011100981.1
- Vitis vinifera: GSVIVT01015726001
Sequences
CDS Sequence:
- >PDK_30s769691g001|Phoenix_dactylifera|C2H2|PDK_30s769691g001
ATGTACTGCCCCGAGGCATATCGAAATATACCGAACTTTACATTTTTGAATTTATGGGATATGCAGCAGGCTGCAGGTCTTACCCATCAAGAAGGCATTGCAAAGGAAAATGGCAGCTTGTCTTCAGTTACACCTATCTCGTCTTATTCAGACGACAATCAGAAGCAAGTTGTCTTATACAGGGTTGAGAAACAGACAAACAATGAACTGAAAAGTATTCTAGAATGTCATGCATGCAACCTGACTTTTGGTGACAAGGACACATATTTGCGGCATCAGTTGTCGTTTCATCAAAGGAGTGCAAAGCGGCGTAGACTTGGCAAATCCATTGGGAATGGCGTCATTGTAAAAGATGGTAAATATGAATGCCAGTTTTGTCACAAGACTTTTAGTGAGAGACATCGTTACAATGGGCATATTGGAGCTCATGTAAGATACCAAGGTCTGAGTGCTGAAGCACTGCCAGATGATATTACGACAAGAAATATATTTAATCCTTCCCCCTTGGCTGCAGTACCATATGGTTTCTCAGAGATGACTGATTTGGCTGAACAAAATGAAGAAACTTGTAATGCAAAATCGGCTGATGAACTTCATGTTGATTCTTCTCAATGCAAAATAGACTCCAAGAATCCTGGAATTGATCATAATGCAAAGTCTGGTGGTAGTGAAACTACTGAAGTAGCCTGCACAAGCATCTCTTTTGATGACCAAAATAATGATCGCAATTTGACTAATTATAAGTCTAATGAGATTCTTCAGGAAAGAAATATCACAGATGACAAATTCAATGCATGCATGGATGCCATATCTCCTTCTGTTGTTGATGTAAACAATGCGGCTCAATGTTGCTCATCTGTTACCACTCAAGAAGCTTCTACAAGCAAATCTGTTGATGACCAGGCTAACAATGTTGATATGATTAATTGTAAATCTGAAGAAGTTGTTGAGGCTAGTAATGTTGGGGATGCCAAACCTAGCGAAGGCCAGGTTAATGATTGTGACATGGGTGGTCATAAATCAGAAGAGGTTATTGAGGCTAGCAATACCAAAGATGTCAGGCCTGATGCAAGCTCGGATGCTGTATCTTCCCCTCTTAAAAATGTGGACAATGCAACCTGTGAAAGTATTGTTGAAATCGGTCAATCTTCCTCCATGAGCATATCTGTTGACAACATTAGTGAATACGCTATGACTGGCTATAAATCTGAAGAGGTTGTTGACATTAATAATGCCATGGCTGTTAAACCTATTGCATTCGTCGAATCTATCTCTCCATCTCATATCAATTTGGACACCGTGACATGCAAAACCAACAATGAAATTGATCTTTCTTCATGTACTGTAATTCCAGAAATTGGAAAATATGGCACTGACCAGAAAGTCAACTCGGAAATTCATTTGATAACCATGTCAGGTAATGGATCAACTTATGGGATTGACACTTTTGAAAATGATATTTTTACCAGCTCCATGGGAGAAAATGTTCTTGTTGAACTGGATACATCTGGCAATGGGTTGAAAACTCAATTTGCAAGATCCGATTCATTATCTGACAAAGAGCCAGTTACTGAGAATATTTTGCCTGGTGAATTCAATGCCGCCTGTATTGACACTACTTTTGTCAATGGACATAATGGGGGTGTTGAAACAGATGCAGATTGTACGTTTGATATTGACATGAAGGAATCTGTGCTTGAAGAAATGGATAAACCAGGTAATGAGCTGGAAAATTGCTTTAATAGCAGCAATGCTGAATGCGAAGAGGTTGTTCCAAGTGATGTTGTTGCAAACAATGATGGAACAAATTACTTGCAACTTAATGTGTCTGGCGCATCATCATGGGTACATTCATCTCATGGTGTCCCAATCCTTGATATGATCCCAGAACAGGAACATTTTGGGAAGTGCTACTTATGTTCTATTATGGAAGCACTCACATGTTGGGCCTTTTTGTCTATTGTCGCTCTACTGGTAAGCTATGTTCCACTTTTACGCGAACATGCTGGAATAGGTCAACCCGTCTTTGATTGTGAAGATGAACTCAGCAGCGTTGGCCAGAAGCGCGAGAACTTGCCGGGCTTTGAAGAGTTGAGGTTGGGTGCATCCAGCTCTTCCGAATTTGTTTGCTTGGATGGTCAGGAGTCGAGTTCTGTGCCTGGGCCATCCATCGAATTGGGTTATGCGACAGCACTGCAAAATGGGAGTTGCTCCTCTGTTCAGTTAGGATGGGACATATCTCCAAAAATGGTCAGCGGATCAGGGAATTCAGCCATGATGGTAGTATTGCTGAACTACAACCTGATTCCCTCGGCTTCATGTGCCCGGCATGTAAGGCAAAGATTTCAGGCGCTGGCAGGCGGCGAGCCCCCTTTCCATCGCATGGCGAGGAAGCCAGAACTAGATACCGCAGCCATCCAATCACTCTCTATCAAATATCCTTCGTCTTTTTACCAAAGAACAAAAAGTTAA
Protein Sequence:
- >PDK_30s769691g001|Phoenix_dactylifera|C2H2|PDK_30s769691g001
MYCPEAYRNIPNFTFLNLWDMQQAAGLTHQEGIAKENGSLSSVTPISSYSDDNQKQVVLYRVEKQTNNELKSILECHACNLTFGDKDTYLRHQLSFHQRSAKRRRLGKSIGNGVIVKDGKYECQFCHKTFSERHRYNGHIGAHVRYQGLSAEALPDDITTRNIFNPSPLAAVPYGFSEMTDLAEQNEETCNAKSADELHVDSSQCKIDSKNPGIDHNAKSGGSETTEVACTSISFDDQNNDRNLTNYKSNEILQERNITDDKFNACMDAISPSVVDVNNAAQCCSSVTTQEASTSKSVDDQANNVDMINCKSEEVVEASNVGDAKPSEGQVNDCDMGGHKSEEVIEASNTKDVRPDASSDAVSSPLKNVDNATCESIVEIGQSSSMSISVDNISEYAMTGYKSEEVVDINNAMAVKPIAFVESISPSHINLDTVTCKTNNEIDLSSCTVIPEIGKYGTDQKVNSEIHLITMSGNGSTYGIDTFENDIFTSSMGENVLVELDTSGNGLKTQFARSDSLSDKEPVTENILPGEFNAACIDTTFVNGHNGGVETDADCTFDIDMKESVLEEMDKPGNELENCFNSSNAECEEVVPSDVVANNDGTNYLQLNVSGASSWVHSSHGVPILDMIPEQEHFGKCYLCSIMEALTCWAFLSIVALLVSYVPLLREHAGIGQPVFDCEDELSSVGQKRENLPGFEELRLGASSSSEFVCLDGQESSSVPGPSIELGYATALQNGSCSSVQLGWDISPKMVSGSGNSAMMVVLLNYNLIPSASCARHVRQRFQALAGGEPPFHRMARKPELDTAAIQSLSIKYPSSFYQRTKS