Information report for 29806.m000966
Gene Details
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Functional Annotation
- Refseq: XP_002525855.3 — LOW QUALITY PROTEIN: uncharacterized protein LOC8276903
- TrEMBL: B9SIN6 — B9SIN6_RICCO; Uncharacterized protein
- STRING: XP_002525855.1 — (Ricinus communis)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy013212
- Cicer arietinum: XP_004485592.1, XP_004485591.1
- Glycine max: Glyma.15G054200.2.p, Glyma.15G054200.1.p
- Prunus mume: XP_008237174.1, XP_008237173.1
- Prunus persica: Prupe.8G062800.2.p, Prupe.8G062800.1.p
- Solanum lycopersicum: Solyc04g074250.1.1
- Solanum tuberosum: PGSC0003DMP400011381
- Vitis vinifera: GSVIVT01015726001
Sequences
CDS Sequence:
- >29806.m000966|Ricinus_communis|C2H2|29806.m000966
ATGGCCACTTCCACCGCTCAACCACCACCACTGTATCTACCATTCGTAGACATGACAACTCTAACGCAATCAGAACTCCATGCTCTTTCCCTCTTCTCCTCCTCCTCATTAAACCCCAACAACATCAACATTATCACTCCACCAATCACCATCGACCGTACACTATTCAACGAAAGCGCCGGTTCCCGCCGCCAAACTTACTCTCGCCCTTCCTCCCACCATCACCGCCACCGCCTCGCCGGCCTCCTCCCTAAAACAACCACCCAAAACCCTAATTTCCCTTCCGAAAACCCCGACACCGATCGCATCGAAAATCATGCCATCATTAAATTCCTCAAACAATTGCTCTCCTCGCATCCTGAATTCAATCAATTAGATTTGATTGATTTCGATAGCTTCACTCATTTAAACGATGCCATAAATTTTAATAACAATAATATCAATAATGTTCAAGTAAAGAAGAGAAAAAGAGGAAGGAAGGCCAAGTTGAAAGTGATAAGTGTCGTGGAGGAGAGAGAGAGGGAGATAGTGAATAAAAACGGAGTTGTAATAGATTTAGTTAAGTTAGCGAGTTTAGAGGATCCGTATAGAGAGGAATTGAAGAGAAGAACTGAAGGGATGGTTAAAGAAGAAGAGTTGTTAGGGTTTTTTAGGGATTTAGGTGGGCAATGGTGTAGTAGGAGAAGGAAAAGAAAGATTGTTGATGCTTCTGAGTTTGGTGACTTTTTGCCTTTTGGTTGGAAGTTGCTGCTTGGACTTAAGAGGAAAGAAGGGAAAGCTTGGGTTTATTGTCGCAGATATATAAGCCCTAGCGGACAGCAATTTATATCCTGTAAAGAAGTTTCTGCATATTTGCAATCGTGCCTTAAGCCTTATGATCACTCAAATGGGAATAATCGACAAGTCCACAGAGTAGCTTCTGAAAATCACGCAGGAACTTCTGGGAGGGAGGAAGATCAGAGGCAACCTAGTGAGCATGAGAAGGCAGTTTCCTTGCTGGGAATTGATAATTTGGAGTTGGCTGAGGTTCAAATACAAGATCTTTTTGAATGCCACAAATGCAACATGACATTTGATGACAAGGACACTTATTTGCAGCACCTTTTATCATTTCACCAGAGGACCACCAGGAGATATAGATTGGGTTCTTCTGTTGGTGATGGTGTAATAGTTAAAGATGGAAAATATGAATGCCAGTTCTGCCATAAGGTATTTCATGAAAGGCGTAGGTATAATGGTCATGTAGGGATACATGTGAGGAATTATGTGAGGGGAATTGAAGAATCGCCTAGTACCAGAATGGCTTTGCAAAAGAGAAGTGAATCTCCAACCAAAGATGAATTGCCTGCTAGAATCTCCAAAATGGATGCTTTGATTGAAATTGCTCAGAATTCCATACGAGAAACGTCTTCTGATCGAAATGGTGAACCCAGTGGTGGATTTAGTTCTGATAAACCAAATATGGTTCCTAATCAAGAACTTCTAGCTTCAGTTTCTGATCATGAGCTGAATTCTGATTCTACTCTCAGCGAACCAGACAAAGAATATGACATGATTGATGAATCTCAGGAATTGGGGCTACATCAGCAGAAAACTGATGATATGATTATTGATGAAAGGATAGAGAAGATTGATGGTGCTGGTGATGTTCTGAATGTAATGGTCGATTCATCTGCTGAAGAGCAACATGGTAATACATCTGAAGCTTTTGGGGGAACAGATTGTCCGTTAGTTCACACTGATGAAATAGTCAAGTCCGTCATTGAGCAGGAAAGTGGTTTTGAACTCCAATCCCATGATCGTCTCCAATCCCTTGCTCCATTGGACGATCATCAAGTTTCTAGGATTGATAGTAACATGAATTTGGTTGGCACAGACAATCAAGATAGCTATGAGAGTATTGAGGTAGAATTCGGATTTCAAAGCAATAATGGTATACCAGATAACAAAATTGTACAGGAGACTGGACAGAAATCTATGAAAAAAGATGAACTTCAAGATGGCATGCCAGAACTGCCTGCGACCCTGTTGCAACCATCTCATGATATTTCAGCACCCAATGTGAGCTTGGATAATGTATTTACGGCATCATAG
Protein Sequence:
- >29806.m000966|Ricinus_communis|C2H2|29806.m000966
MATSTAQPPPLYLPFVDMTTLTQSELHALSLFSSSSLNPNNINIITPPITIDRTLFNESAGSRRQTYSRPSSHHHRHRLAGLLPKTTTQNPNFPSENPDTDRIENHAIIKFLKQLLSSHPEFNQLDLIDFDSFTHLNDAINFNNNNINNVQVKKRKRGRKAKLKVISVVEEREREIVNKNGVVIDLVKLASLEDPYREELKRRTEGMVKEEELLGFFRDLGGQWCSRRRKRKIVDASEFGDFLPFGWKLLLGLKRKEGKAWVYCRRYISPSGQQFISCKEVSAYLQSCLKPYDHSNGNNRQVHRVASENHAGTSGREEDQRQPSEHEKAVSLLGIDNLELAEVQIQDLFECHKCNMTFDDKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIVKDGKYECQFCHKVFHERRRYNGHVGIHVRNYVRGIEESPSTRMALQKRSESPTKDELPARISKMDALIEIAQNSIRETSSDRNGEPSGGFSSDKPNMVPNQELLASVSDHELNSDSTLSEPDKEYDMIDESQELGLHQQKTDDMIIDERIEKIDGAGDVLNVMVDSSAEEQHGNTSEAFGGTDCPLVHTDEIVKSVIEQESGFELQSHDRLQSLAPLDDHQVSRIDSNMNLVGTDNQDSYESIEVEFGFQSNNGIPDNKIVQETGQKSMKKDELQDGMPELPATLLQPSHDISAPNVSLDNVFTAS