Information report for OMERI07G16710.1
Gene Details
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Functional Annotation
- Refseq: XP_015647948.1 — protein indeterminate-domain 1
- TrEMBL: A0A0E0EDM5 — A0A0E0EDM5_9ORYZ; Uncharacterized protein
- STRING: OMERI07G17050.1 — (Oryza meridionalis)
- GO:0019538 — Biological Process — protein metabolic process
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g18370.21.p, Bradi1g18370.20.p, Bradi1g18370.19.p, Bradi1g18370.18.p, Bradi1g18370.17.p, Bradi1g18370.16.p, Bradi1g18370.23.p, Bradi1g18370.22.p, Bradi1g18370.30.p
- Zea mays: GRMZM2G022213_P01
Sequences
CDS Sequence:
- >OMERI07G16710.1|Oryza_meridionalis|C2H2|OMERI07G16710.1
ATGAGGGCGGATCTTAGCACCATACAACAGACGCTCACGCCGGAGGCGGCGGCGGCGCTGGCGAGGGCCATGGATGAGGCTGGGCGGCGCCGGCATGGGCAGACGACTCCGCTGCACGTCGCCGCCGCGCTTCTTGCCGCGCCGGCGGGGCTGCTCAGGCAGGCCTGCGCGAGGGCGGCGTCGGCGGCGGGTGGGGGTGGTGGTGTGGGTGGTGCCGCGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGCGCCGGTGGTCAAGAAGAAGAGGAATCTCCCCGGAACGCCAGATCCGGACGCGGAGGTGATCGCGCTGTCGCCGGGGACGCTGCTGGCGACGAACAGGTTCGTGTGCGAGGTGTGCGGGAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGCCGCGGCCACAACCTGCCGTGGCGGCTGCGGCAGCGCGGGCCCGGTGCGGCGCCGCCGCGGCGCCGGGTGTACGTCTGCCCGGAGCCCGGCTGCGTGCACCACAACCCCACCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGCGCTGGACATGCCAGCGCTGCGGCAAGCGCTACGCCGTCCAGGCCGACCTCAAGGCGCACACCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCACCAGGAGGGACAGCTTCGTGACGCATCGCGCCTTCTGCGGCGCGCTCGTGGAGGAGACGGGCAGGGTGCTCGCCGTGCCTGCACCGCCGTCGCCTCGCCCGCCTGATTTGGAGGCCGAGGAGAATGTGGATAAGGATAAGGAGGAGGAGGTGAAGGAGAAGGAGAAGGAGAAGGAGCTGGAGGAGAATGAGGATTCACCTGTGGCCGAGGTCGATGAGCCGCAGCCCAGCCAGGCGGTGGCGGAGGTGCCGCAGCAGTGCGCTCCATCACCGCCGACTCCGATACTGCAGGAGCATCCTCAGCCGGTGGTGGCAGTGGTACCAAATGTGGACGAGCAAGAGGTGGTTGCTAAGCCAGCTGTGATTGCCAAGATAGAGGTGGAAGATGAGCGAGATGAGGACGTTTGCTTTCAGGAAGCGGATCGATACAAAGATGCTGAACTGGAGGACTCAAACCTGCTGGATAACGACACTCCGATGCTGCCTTGTTTCCTTCCCTCGCCCTCGGAGGCCATTGGCACAGATGGCAGCAGCACCAGCTGCGGCACGGGAAGCAGCGTTACCAATGCTATCGCTCCAGCTACGACGACGAGCACGTTCGCTGGTCTGTTTGCGTCGGTCACAACGAGCAGCACTCCCCAAAGCAGATCCCTCCGCGATCTCATCGGCGTCGATCCCACATTCCTCTGCCTTGCAATTGGTGCGCCGTCTTCTCTCTTCCCACAGACAAATGCAAGTGACCCCTGCTCCTTTGCTCCACCTCCAGCACCGCACATGTCCGCAACCGCTCTCCTGCAGAAGGCTGCTGAGGTTGGTGCTTCGCAATCAAGCTCATCTTTCCTGAAGGAGTTTGGGCTCGCCGCCTCCACCTCATCGTCTCCCCCATCCAAGCTATCCCAAGGGAGGTTCACTACTGGTAACACACCAACAACATCTCATCCACATCCACATCCGCATCCTCATCCGCCTCAAGGAAGGTTCATGGATAACGTCCCACAGCCGCCACCGCCAGCCAAGCTGCCACATCGAATGTTCACCGATAACAGTGTACAACAGTGGCACCATAGGAGCAACCAGCAAAGGGAGATGGAGCCTGGGCCGATGCTACCTGGCGGTCTTGGCCTTGGTCTCACCTATGACAGTGGGAATTCAGGGTTGCCGGACTTGATGATGGGACCATCGGCACTGTACGGTCCCAAACCTGCTACTCTGGACTTCCTTGGGCTTGGCATTGGAGGGACCATGGGTGGCTCCACTGCAAATGGTGGCCTCCCGGCATTGATGGTTGGAGGAGAGCTGGACATGGGATCTGCACAGGCGCCATGGGAGGAGGCCAAGAGAAAGACCAATGGCCGCACAATCCTGTGA
Protein Sequence:
- >OMERI07G16710.1|Oryza_meridionalis|C2H2|OMERI07G16710.1
MRADLSTIQQTLTPEAAAALARAMDEAGRRRHGQTTPLHVAAALLAAPAGLLRQACARAASAAGGGGGVGGAAAAGAGAGAGAAPVVKKKRNLPGTPDPDAEVIALSPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAAPPRRRVYVCPEPGCVHHNPTRALGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKTCGTREYRCDCGTLFTRRDSFVTHRAFCGALVEETGRVLAVPAPPSPRPPDLEAEENVDKDKEEEVKEKEKEKELEENEDSPVAEVDEPQPSQAVAEVPQQCAPSPPTPILQEHPQPVVAVVPNVDEQEVVAKPAVIAKIEVEDERDEDVCFQEADRYKDAELEDSNLLDNDTPMLPCFLPSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSSTPQSRSLRDLIGVDPTFLCLAIGAPSSLFPQTNASDPCSFAPPPAPHMSATALLQKAAEVGASQSSSSFLKEFGLAASTSSSPPSKLSQGRFTTGNTPTTSHPHPHPHPHPPQGRFMDNVPQPPPPAKLPHRMFTDNSVQQWHHRSNQQREMEPGPMLPGGLGLGLTYDSGNSGLPDLMMGPSALYGPKPATLDFLGLGIGGTMGGSTANGGLPALMVGGELDMGSAQAPWEEAKRKTNGRTIL