Information report for Lsa009785
Gene Details
Functional Annotation
- Refseq: XP_023769477.1 — uncharacterized protein LOC111918049
- TrEMBL: A0A2J6L1F9 — A0A2J6L1F9_LACSA; Uncharacterized protein
- STRING: VIT_16s0050g00700.t01 — (Vitis vinifera)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn081281
- Glycine max: Glyma.10G233400.2.p, Glyma.10G233400.1.p, Glyma.10G233400.3.p
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0, Cotton_A_36602_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G2312, Gh_D12G2446, Gh_A08G2455, Gh_D08G1069
- Manihot esculenta: Manes.06G149800.1.p, Manes.14G024700.1.p
- Prunus mume: XP_008234210.1
- Prunus persica: Prupe.2G297500.1.p
- Pyrus bretschneideri: Pbr035354.1
- Ricinus communis: 30169.m006244
- Salvia miltiorrhiza: SMil_00003924-RA_Salv
- Sesamum indicum: XP_011076143.1
- Vitis vinifera: GSVIVT01028908001
- Ziziphus jujuba: XP_015888867.1, XP_015888864.1, XP_015888857.1
Sequences
CDS Sequence:
- >Lsa009785|Lactuca_sativa|C2H2|gnl|UG|Lsa#S58694852
NTTTCGTTCTCTGTTTCGCCGACTGCTTCTCTCATTCCTCGCCAGCTTCGCACACATCAATTTCACCGGTTTTCGCAATCATATCGCCGTCTTTCCGGTGATCTCCTCCACTTATCCGATCTACGGCGATCTCTTAACTCCTTCGGTCTCACACTGATGCCAGTTGCAAAACTTTTGGGCACCAGTTCTGCAGATGCAATGAAAGCAGAGGAAGGAAGCGATTCATTGGATACCTTCATCAAACAAGCAGTTGGAAAAGAACCTTCATTTTCATTTTCAAGAACTGGGGATAGCCCTGTGCAGTGGATACAGTTACTTCATGCTTTGGATCAACAAGATCTCCCTGGTTGGCCCTTGTTGGCTCCTATGAAGATTCAGATGCAGAAATGTGAGAAATGTGCCCGTGAATTCTGTTCACCTGTCAATTATCGAAGACATATACGAGTTCATCGTCGCTCTTTAAAGTTCCATAAGGAGTCCCAGAAGTATAGGGATTTATTGGGGGCATTTTGGGACAAGCTCTCATTCGATGAAGCTAAGGAAATCATGTCTTTCAAGGATGTTAACCTGGAGGAAGTTCCAGGGTCTTCAATAATAAGAAACATTATAGCAAATCTCCGCAAGCCAATCTTTCTATCTCTCCCACAAATTTATGTCAAAGCTGGCTCTATGCTTGTGGACATAATCCAAGGTAGACCTTCTACTTCTAGACTTCCAGTTTCCTCCCAAGAATTATTCAGCATCCTAAATGATGCCAGTGAGACAACATTTCTAAGTGCTGGAACAGCTGAATCATTACAAAAATTCGTCTTTGATGGAGAAGCTGGTAAAATTGGGCTTGAAATCAAAAACCTAATTGCTGCCACCAGCTTTCTTTTCGAACAAAAATTGGTCAAAGCATGGCTTGCAGACAAGGATGCTGAAGCATTAAGATGCCAAAAGTTACTTGTTGAGGAAGAAGAAGCTGCTCAAAGGAGGCAAGCGGAGATTTTGGAAAGGAAAAAACAAAGAAAGCTAAGACAAAAGGAACAAAGAGCGAAAGATCAGTCAAACGAAGTCAAACCGGATTTATTTGAAACAACAACTCCATCCACAGAAACATCCAGCTCTCCAACTTGCGCGGAAGTTGATTCATTTTCTCCAGATGATGATGATGATGATGATGATGTCATTGTTCAGTTTTCAAACAATGTAGAAGAAGAAGAAGAAGAAGAAGAAGATCTGAATGTAGTGGACCCCACGGAGCACCAAAAGGTGCACGGGAACGATTTGCATCAGATGGTGGCTCGATGGCAGGTCCCGAAATCACAAAAAGGCGGTCGAAACGGGTTTTACGGATCCAAAAGGGAACAGACACATAATAAGCATAGAGAACAAAGGGCTAATGTTGTCAATACTAGTAAAATATGGACGAAAAAGCCAAAACCAGAAAATGGAGGGGTGGAAGTTGTGAAGTCTAGAGTACAAAACGACGCAACCAGTCAGAGCCAGAGCCAGAGCCAGAGCAACTGTAGTCAGCTTATGATTGGTTCCATATCTGTGACAGTTAGAAGTCCAGGTCAAGGTCAAGAAAATGGAAATACAGAAGTCAAAAAGAACAACGTCCAGGCTGGCAGGGAACGTTCCACTGTCAAAATTTGGAGGCCACGTCATGAGTCAAGAGGTGTATCCGGAGATAGTAAAGTAAAAGGTGAGAATGGTCAAAGTCAAACTCCGCCTACGTGTCAGTCAAACGATGACAGTGACGGTGGAAATGAGCCCGAAGCAAAGCTCTTCTCTCTTGATGCTGCAAAAGCTTTTCTTGCGCAAAGATGGAAGGAGGCGATATCAGGGGAGCATTCGAAGTTGATTTTATCTTTATCATCATCAAGAGAGGAGCCACCTGGCGAGAATAGTGAGAGTTCAAGCAATAATAATATGAATAATAATAATACAAGTATTAATAATACGAATAATGTGAAAGTGAAAGTGAAAGGAAAGTTTGTAATGAAGGGTGAGAAAGGAGGAGGAGGGGTGAAGACAAAGTATATTCCAAAACAGAAAGGTGGTGTTAATTAG
Protein Sequence:
- >Lsa009785|Lactuca_sativa|C2H2|gnl|UG|Lsa#S58694852
XSFSVSPTASLIPRQLRTHQFHRFSQSYRRLSGDLLHLSDLRRSLNSFGLTLMPVAKLLGTSSADAMKAEEGSDSLDTFIKQAVGKEPSFSFSRTGDSPVQWIQLLHALDQQDLPGWPLLAPMKIQMQKCEKCAREFCSPVNYRRHIRVHRRSLKFHKESQKYRDLLGAFWDKLSFDEAKEIMSFKDVNLEEVPGSSIIRNIIANLRKPIFLSLPQIYVKAGSMLVDIIQGRPSTSRLPVSSQELFSILNDASETTFLSAGTAESLQKFVFDGEAGKIGLEIKNLIAATSFLFEQKLVKAWLADKDAEALRCQKLLVEEEEAAQRRQAEILERKKQRKLRQKEQRAKDQSNEVKPDLFETTTPSTETSSSPTCAEVDSFSPDDDDDDDDVIVQFSNNVEEEEEEEEDLNVVDPTEHQKVHGNDLHQMVARWQVPKSQKGGRNGFYGSKREQTHNKHREQRANVVNTSKIWTKKPKPENGGVEVVKSRVQNDATSQSQSQSQSNCSQLMIGSISVTVRSPGQGQENGNTEVKKNNVQAGRERSTVKIWRPRHESRGVSGDSKVKGENGQSQTPPTCQSNDDSDGGNEPEAKLFSLDAAKAFLAQRWKEAISGEHSKLILSLSSSREEPPGENSESSSNNNMNNNNTSINNTNNVKVKVKGKFVMKGEKGGGGVKTKYIPKQKGGVN