Information report for 439488
Gene Details
Functional Annotation
- Refseq: XP_002966113.1 — uncharacterized protein LOC9652683
- TrEMBL: D8R5F2 — D8R5F2_SELML; Uncharacterized protein
- STRING: EFJ32140 — (Selaginella moellendorffii)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv3_055090_xdwj.t1
- Cajanus cajan: C.cajan_11305
- Glycine max: Glyma.16G181700.3.p, Glyma.16G181700.2.p, Glyma.16G181700.1.p
- Gossypium arboreum: Cotton_A_01293_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A12G2312, Gh_D12G2446, Gh_D08G1069, Gh_A08G2455
- Manihot esculenta: Manes.06G149800.1.p
- Musa acuminata: GSMUA_Achr1P03120_001
- Pyrus bretschneideri: Pbr035354.1
- Vitis vinifera: GSVIVT01028908001
Sequences
CDS Sequence:
- >439488|Selaginella_moellendorffii|C2H2|439488
ATGGATTTCGAGCACGATGTGGAGGTGGAGGCGATGGAGAAGAGCGACGATTTCGTGATTACAATCCCGGAGGGCGATGGTAGTTACGACGAACAGGAGGTAGATGTAGAGCAGGACATAGGTCTCGCGGAGGTTTTGGAATCGCCAGGCGCTGGTGCTGTAGATAGCGAGAAGGCTGCTAGTTCGGTGAAGGGTTTTGACGACGAGAAGAAGGTGAAAACTTCGAATTCCACGACACAGTGCAACATTGTTCCCTCGGTCGAGGAGGGGGGAGGCTCCAATGCGTCCAAGGGTGTGGGAAAAGCATATAGGAAGAGGTCCGACTCTGCGGAGGCCAAGAGGAAAGAGTCCGAGGTAACTGGGCATCGCGGTGATAAGTCGGCGAAGAGCTTCAAGTCGGATGACGCTGGGAACAAGGAGCGAGGATTTCATCTTAGCGATGTTTTCAAGGGAAGCGAGAATTTGGCGAAAGGTTTCCAGGCCAGCGACCGGTTGCATTCACTCAAAGTTCCTCAGGCTGTTGTGGCTTTTGCTCAGGCTGCCGCAAAAGTTAATGAGATTCCTGGGTGGCCATTGTTGCCGAAGCCGCAGATGAAGAAGTGTGAGAAGTGCTCCCGCGAGTTCTGTTCCACGCTGAATTATCGCAGGCACATACGATTACATCGTCGTTCGCTGATTGATGATAAGGATTTGCGGCATGAAAGGTCACAGTTAGCTGCGTATTGGGATAAGCTTACAGCTGAAGAATCCAGTGAAGTCATTTCATTCAAAAATATGGGAATTGAGAATCTGTCTGGAACGTCAGCCTTTCAAGCCTTAGCATCGTTTGTTCAACACCCTGGCCTGCAGCCTTATCCTCCTGCCTACATGAAGGCAGGGACAGTCCTTCTCGAACTTGTACAGAACAAAACTTCTTTATTTCCAATACCGTCGGAAAAGCTTCTTAAAACACTCGATGATGCAAGCGAAGGGACGTTCTTGTGCGGAGGGACGTCAATAGCTGTTCAGCGTTTTGTATATCACGGCGATGCGGAAAAAATTGGACTCGAAGATAAAAATGTGGTGGCTTCTATGAGTTTTCTCGTCGAACAGAAACTGCTGAAAGCGTGGATGGCGGAAAAGAACGTCGAAGCGTTGCGCTGCGAGAAAGCTCTTGTTGAAGAGGAGGAAGCCGCCCAGCGCAAGCGAGCTAAAGATCTGGAAAGAAAACGTCAGAAGAGAAACAAGCAGAAGGGGCGCAAGGGAGTGGATCAGCCTCCAAATGCTGACATTGATCTGGGCGATGAAGAGGTGAATACTCCAAGAACGGGTGACGACGAGGATTATCCGTTTGCGGTGGATAATGGGGAGGGGCCTGTCACCGAAGTCACAGATGAGAATGGCTTCCTTGTTCTGCTGAGGGACAACCAAGCGGCTACTTGGGAAACTTCTTCTGAAGAGAAGACGGTGATGGAGAACAGTATAGAAATGCTACATGAGGAGGATCAAGGTCAGGTCGAAGCGGCATTGAAAGACGACAACTTTGTGGATCAAAATATCGGGAGAGTCATCAAGGATCGAAGACGCACAAACTTTTCCTCTGCTGCAACTTATCGGACGGGTGATAGCTCATATCAAGCTTATTTCCGGCCGAGAAGAACGCAGCACTCGACAAGAATTGATCCATACCAGCAGCACTATCGCAAGAAACTTGCTGGGGTGTACAGAGGTATTGTGAAGGGATCCAATGGTCGTGTCGTCTGGACGAGGAAAGCCAGCCAACCAAGCAGAACAAAAGATGATGACCAGGAAGTAAGTGTTCCCGTGGGTTCGGCGGAAGCTGAGAGTGGCCATACTTTGCTGGTTGGATCATTAAGTGTGCCGCTGGAGGGGCACGTACGACGTCCGTGCTCTATATCGGAAGAGAGCAATCTGATGAGCAAGTCTTCGACTCCCGAAATCTTGGAAGGCAGACAGGCAAGCTGGGCCAAGCCAACACCACCTCTAAAGGTTTGGAAGCCCGTCGGCAAAGTTGGAGATCAAAGTGGTGCGGAAAACTCTCGGAGCATGGTCGAGGACGATGGAACTTTTCCGCCCAAGCTTAGTGCTGTGGCTCTAAGACCAGCGGTGGACAGTGACAATACGGAAGACGGTGCTGCAGTGGACACAAAGCCGTGCCTTGTGGATCTCCATGCGACGTCGCCATCCTTCTCTTCCAAGCTGCTGGCAAGCTTTCTCTCTGAAAGATGGGCCACGGCTGTGGAGCGGAGAAACACCGACGCAAACTTTAAGCACGACAGAACCGGCAAGCGAAGTAAAAACACGAAGGTCTGGCCTATCAACAACGACCAGAACTTGGACGCCGAAGCTCCAAAGCTGTCACCGAAAGGCTCTCCGAGCGGGGTTTTGGACGAGGCTTCAAACGCAAATGGAGTTTTGGACAACAGGCCCAGGAACTTCGTAGGGAACTCTTGTGGCAAGGCCGTGGGACGCTGGCAGCGGAATTCGAAAGACAAACCGGGCGAGCAGAGGTACATGCCGCGTCAAATCTCCTTGGCCTAG
Protein Sequence:
- >439488|Selaginella_moellendorffii|C2H2|439488
MDFEHDVEVEAMEKSDDFVITIPEGDGSYDEQEVDVEQDIGLAEVLESPGAGAVDSEKAASSVKGFDDEKKVKTSNSTTQCNIVPSVEEGGGSNASKGVGKAYRKRSDSAEAKRKESEVTGHRGDKSAKSFKSDDAGNKERGFHLSDVFKGSENLAKGFQASDRLHSLKVPQAVVAFAQAAAKVNEIPGWPLLPKPQMKKCEKCSREFCSTLNYRRHIRLHRRSLIDDKDLRHERSQLAAYWDKLTAEESSEVISFKNMGIENLSGTSAFQALASFVQHPGLQPYPPAYMKAGTVLLELVQNKTSLFPIPSEKLLKTLDDASEGTFLCGGTSIAVQRFVYHGDAEKIGLEDKNVVASMSFLVEQKLLKAWMAEKNVEALRCEKALVEEEEAAQRKRAKDLERKRQKRNKQKGRKGVDQPPNADIDLGDEEVNTPRTGDDEDYPFAVDNGEGPVTEVTDENGFLVLLRDNQAATWETSSEEKTVMENSIEMLHEEDQGQVEAALKDDNFVDQNIGRVIKDRRRTNFSSAATYRTGDSSYQAYFRPRRTQHSTRIDPYQQHYRKKLAGVYRGIVKGSNGRVVWTRKASQPSRTKDDDQEVSVPVGSAEAESGHTLLVGSLSVPLEGHVRRPCSISEESNLMSKSSTPEILEGRQASWAKPTPPLKVWKPVGKVGDQSGAENSRSMVEDDGTFPPKLSAVALRPAVDSDNTEDGAAVDTKPCLVDLHATSPSFSSKLLASFLSERWATAVERRNTDANFKHDRTGKRSKNTKVWPINNDQNLDAEAPKLSPKGSPSGVLDEASNANGVLDNRPRNFVGNSCGKAVGRWQRNSKDKPGEQRYMPRQISLA*