Information report for PH01002064G0190
Gene Details
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Functional Annotation
- Refseq: XP_015624189.1 — B3 domain-containing protein Os02g0598200
- Refseq: XP_015624190.1 — B3 domain-containing protein Os02g0598200
- Swissprot: Q6K5K2 — Y2982_ORYSJ; B3 domain-containing protein Os02g0598200
- TrEMBL: A0A0E0K1Z4 — A0A0E0K1Z4_ORYPU; Uncharacterized protein
- STRING: OPUNC02G20840.1 — (Oryza punctata)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM.
- All members of the B3 superfamily contain an ~ 110 amino acid region called the B3 domain. This domain was initially named because it was the third basic domain in the maize gene VIVIPAROUS1 (VP1).
- The first and second basic domains (B1 and B2) are specific to the VP1-like proteins, but genes that contain the B3 domain are widespread in plant genomes. The B3 domain of VP1 encodes a sequence-specific DNA binding activity.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g47847.3.p, Bradi3g47847.1.p
- Hordeum vulgare: MLOC_18435.2, MLOC_18435.5, MLOC_18435.1, MLOC_18435.3
- Setaria italica: Seita.1G220700.1.p
- Setaria viridis: Sevir.1G224600.4.p, Sevir.1G224600.3.p, Sevir.1G224600.1.p
- Zea mays: GRMZM5G834874_P02, GRMZM5G834874_P01
Sequences
CDS Sequence:
- >PH01002064G0190|Phyllostachys_heterocycla|B3|PH01002064G0190
ATGTGGAATGTTGACAATAAGGTGACGATTAGGAAGCTGTCCACCCCATCTTGTGAGAAGGAGAAGAAAAAGGAAATGCTGAGCAGTCTCAATGATGAGAAGAATATGCGGAGTGGTGATCGTTGCAAGAATAAGAGGAGTAACACGCCACTCTCATTGAACAAGAATGAGATTAAGAAAAATGAAAACAAGAAGAGGACTGCGCTGATCACATGTCCTGTGAAGAAGAAGAAAATGCGGCCCAGTGACAGCATGGAGATGAAGATGCATAATTGTGACAGCAAGGACAAGAAGAAGAGGAACACACCATCCGTTCTCCCCAAGGAGAACAAAATTCAAACATTAAGCAATAACAAGAAGGAAAACAAGAGGAAGGAGTCACTGACACCATTCAAGAAGGAGAAGAAGATGCGGGTTGATGACAATGATAAGAAGGTGGGGAGTGATGACAAAGGGAAGGGGAATAAGATGCAAGGTGATAACACCAAGGAGAAGAAGGCGCAAAGTGGTGGCAGGGAGAAGAAGAGGAAGGCGCCGCTCGCGTTCTTCAAGTTCATATGCAACAATTTCAAGGAATTCCTGTTGATACCACCAACGATTGCACCCAAATTGGAGGATTGGACTAATCATCTTGTATATCTTAAAGACTCAGAGGGAAAGTCTTCAAAGATCAGGCTATCGGTGGTGGATGGTTCCCTGGCTTTTCATCACGGGTGGGGCGGTTTTGTTTCAGACCATTCAATTAAGTGGGGTGACTTTCTGTTGTTTGAGTACGCTGGCATCTCAACATTTTCTGTGCGGGTGTTTGGTATGGATTGTTGTGAAAGACTACATTTCGATGTTGAAAGACAAGGTAGGAATAATCAGAAAGAGAGTCATACGTTACTCGATGATTTGGTCTCATCTCAAAGGGGTCGGAACTCTGAAGACATAGATGATCGCCACTATGTTTCTGGTGAATATCCTAGGAGCAAAGAGCCTAAAGCAACAGTTGGCAGTTATAGTATGAATAATGGCAAGATTGCTTCCTGTAATTTAGTTGCTGAATCTATGAATGCAGCTTCAGAAACACATCGTATGACAGCTAATAAAAAAGAAGACCCTAGCAGAGTAGTAAGTGGGGTTGAGCGTGGACCCTCAGCGGCAGTATATAATGAGGAAGGGAATTTGGCCACTGGAGAGTGCAAAACACAGAGTATTTCGCCAATGTGCAGCAAAGAGAAAACAAGAAGGTCTGAAATAATTCTAACTACTGATGCAGCTCCTTTAACACAAGAAAATAATGATACAGTGAAGCTAACACTATTCAGTGTTGCTTCAGAAACACATCATGTGACTGTTAATACAAAAGAAGATCCTCAAGGAGTTGCCGGTGGATCTTGGTGTGGACCCTCAGTAACCCTAGATAACAAGGAGGGGAATTTGGCCATTGGAGAGTGCAAAACAAAGAGTATTTCACCAATGTGCAGCCAAGAAAAAACAAGAAGATCTGAAATAATTCTAATTACTGATGCAGCCCCTTTAACACAAGAAAATGATGATACAGTGAAGTTAACAACATTTTCTCACCACAAGGAAAATAGAAGCATGATGAGAGAATCTGAGCCAGAGGTTGCTACTCCAACAAAATGTACGGAAATACATGATTCCGATGAAGATTTAAGAAGGAAAGAAAGAAATACCGTTCAATTAGAATGTACTACAGTTGTGGACAAATGTCCTAATAATTGCAAGAATACCGTTCAATTAGAATGTACTACAGTTGTGGACAAATGTCCTAATAATTGCAAGATGAATACCACTGGAAATGTTTGCAGAAAATATGGAGCTCCAGGAGGTTCTCGATGCTTGGAGAAGTGGAAGAAGGGTATTGTGAGCGGTCGAGCAGCTCTTGATGGCACTGGACTGATTAGACCTGAAAAACCACAAAAAACTGACGAGAAATTGGTTGGTAGCTGTGGTGCTATGGGACCAAACCCTGTTGAACATCGGTTATGGTCTGACAGTACTGATTCTTGTGTCCAACCAATGCCTGACAGGATATCCAAATCTGGACATAGTAGGGCAGAGTTCGACCATTCCGTCAATGGAAAAGGCGCTACTGTTCAACTTCTAACAAAAAGGAAACAATTGGAACTTGTGGGAAGCATTGCTGAAGCTCTGGAGTTAGATGATTTTTCCTTACCAAAGATCAACTTTGAATTCTGCATTCCTTCTACCACTCAGACATGGCTTGTTGAGCTTACAACGTGTGAGCAATGGATGGCAGTTATTGAGTCCATTGTTTGTGCTCCAGGGTCAGTGAGGCTTGTGGGTAGTGATGAGTTACCCAAGTCACTTTCTAATGCTGTTCGCCAAAAAGGAAGGCAAAATCGGGACGTTATAATGCTCAAGGATCCCATGAAGAGATTATGGCCGGTCTTTTACCATGAGAACCCAGTATTCGTGGGATTCACCTCAGGCTGGAAACCTTTTGTTGCAGCAAACAACCTTCAGATTGGGGATCGTTGCGAGCTTTTAAAAAAGCTTGATGAAGAGGAGGCAGTGTACCATGTCCAGATCACAAAAAATGAGGCAAGTGCTGGCTGCACCATCTTCTGTAAAACAAGCATGGTCCCTGTTTAA
Protein Sequence:
- >PH01002064G0190|Phyllostachys_heterocycla|B3|PH01002064G0190
MWNVDNKVTIRKLSTPSCEKEKKKEMLSSLNDEKNMRSGDRCKNKRSNTPLSLNKNEIKKNENKKRTALITCPVKKKKMRPSDSMEMKMHNCDSKDKKKRNTPSVLPKENKIQTLSNNKKENKRKESLTPFKKEKKMRVDDNDKKVGSDDKGKGNKMQGDNTKEKKAQSGGREKKRKAPLAFFKFICNNFKEFLLIPPTIAPKLEDWTNHLVYLKDSEGKSSKIRLSVVDGSLAFHHGWGGFVSDHSIKWGDFLLFEYAGISTFSVRVFGMDCCERLHFDVERQGRNNQKESHTLLDDLVSSQRGRNSEDIDDRHYVSGEYPRSKEPKATVGSYSMNNGKIASCNLVAESMNAASETHRMTANKKEDPSRVVSGVERGPSAAVYNEEGNLATGECKTQSISPMCSKEKTRRSEIILTTDAAPLTQENNDTVKLTLFSVASETHHVTVNTKEDPQGVAGGSWCGPSVTLDNKEGNLAIGECKTKSISPMCSQEKTRRSEIILITDAAPLTQENDDTVKLTTFSHHKENRSMMRESEPEVATPTKCTEIHDSDEDLRRKERNTVQLECTTVVDKCPNNCKNTVQLECTTVVDKCPNNCKMNTTGNVCRKYGAPGGSRCLEKWKKGIVSGRAALDGTGLIRPEKPQKTDEKLVGSCGAMGPNPVEHRLWSDSTDSCVQPMPDRISKSGHSRAEFDHSVNGKGATVQLLTKRKQLELVGSIAEALELDDFSLPKINFEFCIPSTTQTWLVELTTCEQWMAVIESIVCAPGSVRLVGSDELPKSLSNAVRQKGRQNRDVIMLKDPMKRLWPVFYHENPVFVGFTSGWKPFVAANNLQIGDRCELLKKLDEEEAVYHVQITKNEASAGCTIFCKTSMVPV*