Information report for SIN_1020846
Gene Details
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Functional Annotation
- Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.
Homologous
- Actinidia chinensis: CEY00_Acc28651, CEY00_Acc22585
- Daucus carota: DCAR_004433
- Gossypium hirsutum: Gohir.A07G022116
- Juglans regia: Jr06_04450, Jr15_03400, Jr15_03410
- Manihot esculenta: MANES_16G079300, MANES_03G047300
- Medicago truncatula: Medtr1g016490
- Populus trichocarpa: POPTR_018G054700v3, POPTR_006G230700v3
- Prunus persica: PRUPE_1G413700
- Rosa chinensis: RchiOBHm_Chr6g0310681
Gene Resources
- Pfam: PF05920 PF07526
- UniProt: A0A8M8UUC1
- RefSeq: XP_020550152.1
- KEGG: sind:105164678
- InterPro: IPR001356 , IPR006563 , IPR008422 , IPR009057 , IPR050224
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS50071
- Gene3D: 1.10.10.60
- OrthoDB: A0A8M8UUC1
- CDD: cd00086
Sequences
CDS Sequence
- >SIN_1020846
ATGCAAACAGAGGCAGGATCACATTCTGTTGTTACAGACGGCAACTCATTTTCCCTAAATCATTATGATTCAGTTGACGGGCATAGTCAAGATCATGTCAACCCTGGATTTCTTGCTCCTTCGAGTCTTGGAGAAGCTCTGATCAATTTCACTTGTGGGCAGATTCCAGATCGTGTTTCTGATGAGTTTTGGAGCATACAGCCAGGAAGGGATACTATCAGAGGTTTATCAACTGGGACACCATATCCCCAAGTTATGAGCAGTCAGGATATTGAGGGGAATTCCCTTCCTGCTGCAGCCAGCACCACCTTCCCAGCTTCAAGATACTCCACAACTGAGGATCATGAGAAGTTAACAACTTCCAGCCCTTTCCTGCATCCCTTTGAATGCCCAAGAACTGTTGTGACCTCTACGATCCAGAGCATGAATTACAGCTATGAGGATTTACCGTTTGGTACAAGCACTAGATATGACTTCAGCAAGTTTGTAACTCCTCCAGAACTCGTCGGGAGAGTTGTTGGAAGAACAGGAGTCCAACCAACTGGAAACTCCGTTCTGAATGAATGGATACTGACAGAAGAAGGGGACTTGAACTGTGACAATCTGGGCCCTACTCGTTTTAGCAATGAGTTATCTCTGAGTCTTTCCACATATCAACCTTCTGTGGTAAATGGAACTTCCATTCAGGAGCAATGCTCAGAGATGAGCTCTTCAGGTGTAACTAGCTATTCTTTGCACAAAAGACCCATAAGGCCTGAACATACATTTTGCAGTAGTAATACCCTCTCATTGAGCTCTAATTCTCAGAAGCCACTCCAACTTTCACCGGCATTATCGGGATCAAGATTTTTCCATGCAGTGCAAGAAATACTTGCTGAAGTTGCTTGCTATGCACTTGAAAACTTTGACCAGATGAGTTACCCCACCCCTTGCATTGATAATGGGGTAAACGCATCGTTTTCTTCAAGTTGCACTGCTGGAAGAGGCTGCTCAACTTTCTCCGATGGACTTGATGCGGGCTATAGGCTCGTCTTTCAGAACAACCTCTTCCCAGAACAGGAGGTTGAAACAAAGAAGAAACACCTGCTATCTTTATTGCAAGCGGTTGATGACCAGTACAACCAGTGCTTGGACGAAATCCATACAGTAATATCAGCATTTCATGCTGTAACCGAGTTGGATCCTTATCTACATGCTCGGTTTGCTCTCCCAACAATTTCTGTCATGTACAAAAACCTCAAGGAGAGAATTAGCAGTCACATTCTTGCAATGGGAGCACATCTTAGCGAGGGAGAAGCAAGAGAAGAGAACTCATGCGCGACATCTTTCATCCAGAAGCAGTGGGCTCTCCAGCAGCTAAGAAAGAGAGATCACCAATTATGGAGGCCTCAAAGAGGACTGCCTGAAAGATCCGTCTCCGTTTTGAGGACATGGATGTTTCAGAATTTCCTTCACCCGTATCCCAAAGATGCAGAGAAGCACTTGCTTGCCTTGAAAAGTGGTTTGACAAGGAGCCAGGTGTCAAATTGGTTTATAAATGCCCGTGTTCGTCTATGGAAACCAATGATAGAGGAAATGTACACAGAGATGAACAGAAGAAAAGCTCGTAGAAACGATGAAGAAATGGTTGGCATCCATAGAAATCAAATGTGCTTTGAGAACAGAAGAGTTACTATGAATTCAAATGGGTAA
Protein Sequence
- >SIN_1020846
MQTEAGSHSVVTDGNSFSLNHYDSVDGHSQDHVNPGFLAPSSLGEALINFTCGQIPDRVSDEFWSIQPGRDTIRGLSTGTPYPQVMSSQDIEGNSLPAAASTTFPASRYSTTEDHEKLTTSSPFLHPFECPRTVVTSTIQSMNYSYEDLPFGTSTRYDFSKFVTPPELVGRVVGRTGVQPTGNSVLNEWILTEEGDLNCDNLGPTRFSNELSLSLSTYQPSVVNGTSIQEQCSEMSSSGVTSYSLHKRPIRPEHTFCSSNTLSLSSNSQKPLQLSPALSGSRFFHAVQEILAEVACYALENFDQMSYPTPCIDNGVNASFSSSCTAGRGCSTFSDGLDAGYRLVFQNNLFPEQEVETKKKHLLSLLQAVDDQYNQCLDEIHTVISAFHAVTELDPYLHARFALPTISVMYKNLKERISSHILAMGAHLSEGEAREENSCATSFIQKQWALQQLRKRDHQLWRPQRGLPERSVSVLRTWMFQNFLHPYPKDAEKHLLALKSGLTRSQVSNWFINARVRLWKPMIEEMYTEMNRRKARRNDEEMVGIHRNQMCFENRRVTMNSNG