Information report for DCAR_004433
Gene Details
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Functional Annotation
- Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.
Homologous
- Actinidia chinensis: CEY00_Acc22585, CEY00_Acc28651
- Glycine max: Glyma.17G230000, Glyma.06G051600, Glyma.04G050800
- Gossypium hirsutum: Gohir.A07G022116
- Juglans regia: Jr06_04450, Jr15_03400, Jr15_03410
- Manihot esculenta: MANES_16G079300, MANES_03G047300
- Medicago truncatula: Medtr1g016490
- Populus trichocarpa: POPTR_018G054700v3, POPTR_006G230700v3
- Prunus persica: PRUPE_1G413700
- Sesamum indicum: SIN_1020846
Gene Resources
- Pfam: PF05920 PF07526
- UniProt: A0A166J428
- EMBL: LNRQ01000001
- AlphaFoldDB: A0A166J428
- KEGG: dcr:108214536
- OMA: KEHQIWR
- InterPro: IPR001356 , IPR006563 , IPR008422 , IPR009057 , IPR050224
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS50071
- Gene3D: 1.10.10.60
- OrthoDB: A0A166J428
- CDD: cd00086
- STRING: 79200.A0A166J428
Sequences
CDS Sequence
- >DCAR_004433
ATGGATTCATTTACGGTGCCCACGAATATGGACTGCCCGAACCATATAATTGAGGAGGATAAATTTTTATGTTCAACCTCAATTTCTGGTTATCAGTCAAATCTACACAATCTGAACGAGCAAAGCCAGATCATGGCTGAATTTCCTGCACTTTGCTTGACACAAGGTGAATTTCTGAATCATCTCCAGTGGCATCCTCACCTCAATTATCATGGCGAGATACCTAGTTATACTGCATTTACCTCCAGGAGTTCGCAGCAAGAGAGAGTCCCTGACTCGACAGGAAGATTGTATCCAACCAGTAACACCGAGAATCAGGTTAAGTATATGGGCGGAATGGCTACTTTTGGTGCTGCACATGCAAACCTTGCGAATTTTAATGGCAAAGAGACTCCTCCAGCATGCGCTCAAGAAGTGATGAAACCTTTTGTTTCAAATGACTATGATACTGGGCGATCTTCACTTGGAACTTTTGGAAACCATGAGGAGAGGAATGTTAATGTAAGAAGTAAAAGGGACTCGCACAATAATCTTGCTCCTCAATTTGCTAGGCCGGTTCCTGAAATAACAGAATTTGAACCACTCATAACCATGGGAAACATGGATCAAAATGGGTGGGTTTCAGCAGAAAATAGAAGTATGAGTTCGGATTATACTTCTGGATCATCAAAATACAGCAACGAGCTATCACCGAGTCTTTCTGTATCACAGCCAGCAGCTATACGCACAATAACTTTTCCAGAACATTGTTCAGAGATTAGTGGTTCAGGTTCAGAGCAAGCTTCTTGCAACATCAGTAATTTTTCTCCAAATTTAAGTTATCAACCTGTCCAACTTTCAAGCCTGTTATCTGGATCAAGATTTCTTACAGGGTTGCAAGAAATACTTTCCGAACTTGCAACGTATTGTTTTAAAAATTCAGGTCGTGTAGGCTATTTTGCTGGTAGAACTAGCTCCAGGATAAATATTCCACACGCTTCAAGTCAAGATGCTGAAAGAAGTTATACACCAATGGATCCTGATAGCTCTAATGATGATAATTACCTCCCGACAAGGGGACAGGAAGTTGAAACGAGGAAGAACTTGCTTGATTTACTGCAAATGGTAGACAATCAGTACAACCACTGCTTAGATGAAATCCATAAAGTAATATCTGCATTCCACTCGGTAACTGAACTGGATCCTCATATACATGCTCATTTCGCTCTTCAAACAGTTGATATGTTGTATAAGAACCTGAGGGAGAGAATCAGCAAGTCTGTCCTTGCACTGGGGGCTCGTCTCCATGATGGAAGTAGAAAGGAAGAGGAAATGCCATTTGAAACCTCTTTTATCCAGAAACAGTGGGCTCTCCAGCAGTTAAGAAGAAAAGAACATCAGTTATGGAGACCCCAGAGAGGCTTGCCAGAAAGATCAGTCTCCGTGTTAAGGGCATGGATGTTTCAAAACTTTCTTCACCCGTATCCAAAAGATGCTGAGAAGCATTTGCTTGCCGTAAAAAGTGGATTGACTAGAAGCCAGGTGTCCAATTGGTTTATAAATGCTCGAGTTCGGATCTGGAAACCAATGATAGATGAAATGTACTCAGAGATGAACAGGAGGAAACGCCATCAGAACAATGAAGAGATCGATAGCCATCAAAGAAACCATATAAGCATCGACGGCCATCGTTTTAGAATGTTTTAA
Protein Sequence
- >DCAR_004433
MDSFTVPTNMDCPNHIIEEDKFLCSTSISGYQSNLHNLNEQSQIMAEFPALCLTQGEFLNHLQWHPHLNYHGEIPSYTAFTSRSSQQERVPDSTGRLYPTSNTENQVKYMGGMATFGAAHANLANFNGKETPPACAQEVMKPFVSNDYDTGRSSLGTFGNHEERNVNVRSKRDSHNNLAPQFARPVPEITEFEPLITMGNMDQNGWVSAENRSMSSDYTSGSSKYSNELSPSLSVSQPAAIRTITFPEHCSEISGSGSEQASCNISNFSPNLSYQPVQLSSLLSGSRFLTGLQEILSELATYCFKNSGRVGYFAGRTSSRINIPHASSQDAERSYTPMDPDSSNDDNYLPTRGQEVETRKNLLDLLQMVDNQYNHCLDEIHKVISAFHSVTELDPHIHAHFALQTVDMLYKNLRERISKSVLALGARLHDGSRKEEEMPFETSFIQKQWALQQLRRKEHQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRIWKPMIDEMYSEMNRRKRHQNNEEIDSHQRNHISIDGHRFRMF