Information report for scaffold_304327.1
Gene Details
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Functional Annotation
- vernalization5/VIN3-like protein;(source:Araport11);Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Brassica napus: BnaA01G0071400ZS, BnaC01G0084500ZS, BnaA03G0516300ZS, BnaC07G0495000ZS, BnaA08G0156000ZS, BnaC03G0774400ZS, BnaA06G0310800ZS, BnaC03G0513300ZS
- Brassica oleracea: Bo1g014420, Bo7g114310, Bo3g175710
- Brassica rapa: Bra011173, Bra024097
- Vitis vinifera: VIT_18s0001g07650
Gene Resources
- Pfam: PF07227
- UniProt: D7L2T2
- EMBL: GL348715
- AlphaFoldDB: D7L2T2
- KEGG: aly:9322321
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF9
- OrthoDB: D7L2T2
- CDD: cd15521
- eggNOG: ENOG502QR8D
- STRING: 81972.D7L2T2
- HOGENOM: CLU_016873_0_0_1
Sequences
gDNA Sequence
- >scaffold_304327.1
AAAAGACCTAAAACTTGAATCAATGCTTATCATCCGATCTCCTATAATCAATGCTCAGCAGCATCAAACACAATCCAGCAGACTCACAGTCACCACCACCGCTACTGCCACCACCAATCGCAGGACGCTTCCTTGATATGCAATCAGAGAATATATCAATGAGCTTCTCAGCCAGAGCTACTGTATCGTCTTTGAAAGTATCAACACAGATCTCCACGATATGTTTCTCCTTAGACGTCGCTCTTAAGCTATACCAAGTCAGAAACTTCACTCTGAAATCACTCTTGACCTTACCTGAGCACTCTAGCTGCCTAATGAGCTTCACACATTGCTCAAGCCCAAATCTCTCCATTTTGTTCCCATTCTCCTGTCTATCTGTTTCTAAGGAAGGCGGTGGTGGAAGTGAAAGATTTTCGCAGTTTGGCATATTCATTAAAACTGCTGCCGCTTCTTTGTCATCTTCTTCTTCTTGGAGGGTTTGTGTAGAGACTCTGAATTCATCTACGCTCACTTCTTCGACGCCGCTAAAGGAAACAATCTTGAAGCAATACTCTGTAGCTGGAGTTAGTTCCAAGACATTAAACCTTGGGTAACTTGTTACACTGAACAACTCACGAGTCAAATGCTCCGAGTAATATCTCTCTGTGGCCTTTCGATGGAACATCCGGTAATGATTGGTATCTCCCCATGAGAAAGATTCTTCGACATCCATAATGAAAGTTACAGAAGTTGCTAGAACAGACTCAATTTTGATCTTCAATGATCCTGTGGTTCATATCGAATCAAGCACTGGAAGAAGAAACCACAAGTATAGTGTTTTGTGATCATAAGTGTTTATTGATCTTACCTTGAATAGTAGAAGGCAGTGGAAGACTATCAAGCTCTTTCAGAGCAGAAGAGCAATGTCCCTTGACTTTTTTCGCGCAGCAAAGTCTGTTAACGAGCCCTCTACTCAACTCCGATGGAAGACCAGTAATAGGAACACCGAATTCAGTTTCTAGATGCTTCACAGCTTCCTCCACCTCTTTAGATACTAGTGTGTACTTGTTTGTTCCCTTGAGAAGCTTATGAGCCATGAGAATGCGGAAACAAAACACACCTACTCTTCTTTCTTCATTTGCAATGATCAGTTGCTTCTTCAAACATCTAAGAAGAAGAAAAAAAGTTAGAAACTTAATAAACATCAAAGATTGTATTATAATGGAAAAAGATCGTTTGAGAATTTACTCTATCTTGCTGTTTTCCTTGCCACAGAAAACACAGCTGAAGCATCCATCAATATTACTACTCGGCGTATCCTCTTTCAGACCCGAATTCTCATTGTTGAAAGCGCAAACCAGGTGGCAAGATAAGCCACAAGATTCACCGTCCAATGGAGGATCTGAATTGCAGGTTAACCAGAGACTAGGATCTTTATTGTTATCATACTTATAGCAGATACAACAGGTACACCTTTGGCAAAAAGTGGCTTCCTCTCTTAGTTTAGCCTGGCAAGCCAAGTTCTGACAATACATTGTACCCTTGCCTGATCAATGCTATGTTCAAGTTAGCATATAGAAACAGAAGAATGCTGCAAATGGATAATGACTACTGCAAAACATGTTTGTTACCTTTAGCTTTAGCTAACGGAGTCACATAGTGCAAAGGATCAAGATCTTTCCTCTGTCTTTTTGGTGATGGATTTCTCTCTTCTTCTACCTCATAACCTCCAGTGTTTTTCTTTGATACAATGTTGAAAAGCCTTATGATGATCTCTTCTTTCGTTAAACCGGTGTATTTTATATATTTCCCTGATTCTGCACGTAAGAGCTCTCGAATCTCGTTGCAGCTCCAGTCCTTCAAGACTTCTTTGAAGGCTCTCTCGGATTCTTTCGACAGCTTCCAGACAAGCTGTCTCTTTTGATCAAAACTCATTTTACTGCTTCCCATTGAGTCACCTGCAGCTCCTGCATGAAGAAAAAAGACGTAAATTTACATTTCAATCGCAATTACAACTCCTAAAATAACAATGTATTAACAAAATAATTCTCCATGACAGAAACACAAATTAGTCAAAGACTGCTTCCATGAGCTTGTTTGCCACATTTAGAAGAATGGTTTCAGATCAAAATTTATGCAACAAGAAAATCTAATTTAGTACCATGTACAGTAACACAAAGAAACCCTCTACTATAACCGCAGAACAAAAACACTCGAATTCTACATGTTGCCTGGGACATCAACGAGTCTAGGAAATCGAAACAACAATACAAAAGCTCACAAAACCCAGAAGAGAACAAGATACATGTTTCCACAAAGCAAGTGAATCCATAAAGGTTCTTTAAGAAGAATCCACATTCATTACAATAAGTTCCAAGAACATCGCAGACACAAAGAAAGTTTCCTCTTTTATGGTACAACACATCAACCAATGAGCTTGAAAATGTGTTTTAGAAAGACCCACCAATAAAATTAGCACTCACAATCATGAAACTTTCCAAACAAAAACAAGTTGAGGATGTAAAATCAAGATGAAAACAATCGTTACGCTACGTTCATCTTCACGAGTCAAAAAAAGTCTCAAACTTTCTAAAACTATGAAATGCAGAATCCAAAATAAAAACGTTACCTTTATGAGAAGACGCCATGAAAGAGACTAGTAGAGAGC
CDS Sequence
- >scaffold_304327.1
ATGGCGTCTTCTCATAAAGGAGCTGCAGGTGACTCAATGGGAAGCAGTAAAATGAGTTTTGATCAAAAGAGACAGCTTGTCTGGAAGCTGTCGAAAGAATCCGAGAGAGCCTTCAAAGAAGTCTTGAAGGACTGGAGCTGCAACGAGATTCGAGAGCTCTTACGTGCAGAATCAGGGAAATATATAAAATACACCGGTTTAACGAAAGAAGAGATCATCATAAGGCTTTTCAACATTGTATCAAAGAAAAACACTGGAGGTTATGAGGTAGAAGAAGAGAGAAATCCATCACCAAAAAGACAGAGGAAAGATCTTGATCCTTTGCACTATGTGACTCCGTTAGCTAAAGCTAAAGGCAAGGGTACAATGTATTGTCAGAACTTGGCTTGCCAGGCTAAACTAAGAGAGGAAGCCACTTTTTGCCAAAGGTGTACCTGTTGTATCTGCTATAAGTATGATAACAATAAAGATCCTAGTCTCTGGTTAACCTGCAATTCAGATCCTCCATTGGACGGTGAATCTTGTGGCTTATCTTGCCACCTGGTTTGCGCTTTCAACAATGAGAATTCGGGTCTGAAAGAGGATACGCCGAGTAGTAATATTGATGGATGCTTCAGCTGTGTTTTCTGTGGCAAGGAAAACAGCAAGATAGAATGTTTGAAGAAGCAACTGATCATTGCAAATGAAGAAAGAAGAGTAGGTGTGTTTTGTTTCCGCATTCTCATGGCTCATAAGCTTCTCAAGGGAACAAACAAGTACACACTAGTATCTAAAGAGGTGGAGGAAGCTGTGAAGCATCTAGAAACTGAATTCGGTGTTCCTATTACTGGTCTTCCATCGGAGTTGAGTAGAGGGCTCGTTAACAGACTTTGCTGCGCGAAAAAAGTCAAGGGACATTGCTCTTCTGCTCTGAAAGAGCTTGATAGTCTTCCACTGCCTTCTACTATTCAAGGATCATTGAAGATCAAAATTGAGTCTGTTCTAGCAACTTCTGTAACTTTCATTATGGATGTCGAAGAATCTTTCTCATGGGGAGATACCAATCATTACCGGATGTTCCATCGAAAGGCCACAGAGAGATATTACTCGGAGCATTTGACTCGTGAGTTGTTCAGTGTAACAAGTTACCCAAGGTTTAATGTCTTGGAACTAACTCCAGCTACAGAGTATTGCTTCAAGATTGTTTCCTTTAGCGGCGTCGAAGAAGTGAGCGTAGATGAATTCAGAGTCTCTACACAAACCCTCCAAGAAGAAGAAGATGACAAAGAAGCGGCAGCAGTTTTAATGAATATGCCAAACTGCGAAAATCTTTCACTTCCACCACCGCCTTCCTTAGAAACAGATAGACAGGAGAATGGGAACAAAATGGAGAGATTTGGGCTTGAGCAATGTGTGAAGCTCATTAGGCAGCTAGAGTGCTCAGGTAAGGTCAAGAGTGATTTCAGAGTGAAGTTTCTGACTTGGTATAGCTTAAGAGCGACGTCTAAGGAGAAACATATCGTGGAGATCTGTGTTGATACTTTCAAAGACGATACAGTAGCTCTGGCTGAGAAGCTCATTGATATATTCTCTGATTGCATATCAAGGAAGCGTCCTGCGATTGGTGGTGGCAGTAGCGGTGGTGGTGACTGTGAGTCTGCTGGATTGTGTTTGATGCTGCTGAGCATTGATTATAGGAGATCGGATGATAAGCATTGA
Protein Sequence
- >scaffold_304327.1
MASSHKGAAGDSMGSSKMSFDQKRQLVWKLSKESERAFKEVLKDWSCNEIRELLRAESGKYIKYTGLTKEEIIIRLFNIVSKKNTGGYEVEEERNPSPKRQRKDLDPLHYVTPLAKAKGKGTMYCQNLACQAKLREEATFCQRCTCCICYKYDNNKDPSLWLTCNSDPPLDGESCGLSCHLVCAFNNENSGLKEDTPSSNIDGCFSCVFCGKENSKIECLKKQLIIANEERRVGVFCFRILMAHKLLKGTNKYTLVSKEVEEAVKHLETEFGVPITGLPSELSRGLVNRLCCAKKVKGHCSSALKELDSLPLPSTIQGSLKIKIESVLATSVTFIMDVEESFSWGDTNHYRMFHRKATERYYSEHLTRELFSVTSYPRFNVLELTPATEYCFKIVSFSGVEEVSVDEFRVSTQTLQEEEDDKEAAAVLMNMPNCENLSLPPPPSLETDRQENGNKMERFGLEQCVKLIRQLECSGKVKSDFRVKFLTWYSLRATSKEKHIVEICVDTFKDDTVALAEKLIDIFSDCISRKRPAIGGGSSGGGDCESAGLCLMLLSIDYRRSDDKH