Information report for BnaC03G0513300ZS
Gene Details
|
|
Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Brassica oleracea: Bo3g095330, Bo7g114310, Bo1g014420
- Brassica rapa: Bra024456, Bra024097, Bra011173, Bra010297
- Gossypium hirsutum: Gohir.A05G004280, Gohir.D05G005000
- Vitis vinifera: VIT_11s0052g00830
Gene Resources
- Pfam: PF07227
- UniProt: A0A3P6B1F4
- EMBL: LR031872
- AlphaFoldDB: A0A3P6B1F4
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF9
- CDD: cd15521
Sequences
gDNA Sequence
- >BnaC03G0513300ZS
CACCGCTTTCTTGATATGCAATCAGAGAACGTGTCAACGAGCTGCTCAGCTAAAGCTACTGAATCGTCCTTGAAAGCATCAATGAATGTCTTCACAACGTTCATCTCCTGAGCACTGGCTCTTAAGCTATACCAAGTCAGAAACTCCTGTCTGAAACTCTTATCAACATGACCTGAACACTCAAGCTGTCTCATAATCTTCACACAATCCTCCAGCCCAAAACCGCAGCTTATTGAACTCTTAACATTGACCAGCTTCTCTGGAACAGTTTCTTCTTCTTTAGTGCTTAAGCTACTCACAAAAGCTGCTTCCTCTTCTTCTTGAAGGGTTCTGGTCAAGACTTTGGTTTCATCAAGCGGTGTATCTTGGAGGGATTTCAAAGCAGAAGAGCAAAGATCCTTCACTTGTGGCGCTGAGCCAAGCCTGTTTACGTTTCCTCTACACATTGCCGATGGGAGATCAGTAAGGGGACCACCACACAACTCAGTTTCCAAACTCTTCACAGCTTCCTCCACGGTCTCAGATAGTTTTCTGTACTTCTCCGTGCCCTTGAGAAGCTTCTGAGCCAATACAAGACGTTGACAAAGCACGTCAACGCTTCTGGTTTCCTTTGCAATCAACATTTGCTTCTTCCAACACCTAAGAAAGAAAGAAAAAAATAAAATAAAGATCTGTCCAAACTGAATTCAAGATTGATTGGTTGAGATTTTTACTCAAGCAAGCTGTTTGTTTTGCCACAAGAGACACAGGAGAAGCATCCATCAACGTCACTACTTGGCTTGAGACCTGATTTCTCAGTCTTGAAAGCACAATCCAGATGGCAAGACAAGCCACAAGACTCACCGGGGAACGGAGGATCGGAACCGCAAGTTAACCAGAGACTAGGATCTTTATTGTCATCATACTTATGGCAGATACAACAAGAACACCTTTGACAGAACAAGTCTTCTTGTCTCAGCACAGCTTGACAAGCCAAGTTCTTACAGTAGATACTACCGCCTTTAGCTTTATTAACCGATTCAGCGCTCACATAGCGAGTAGGAGTAGCGTTCTTCCTTTGTCTTTTTGAGTTTCTCTTAGTTGTTTTTGTTGTTGTTGATGAGTCTCTCTTCCTGTCTTCTTGATCTCCTCCAGAGTTTCCTTTAATAGGAGGCGTTGGAGCTTTTTTCTCTGATACAGTTTTCAAGAGGCTGTTGATGAGCTGAGCTTTCGTCAGGTTCTTGTACTTTCTTTCTTTACCCAACTCTGCGCATAAGACCTGTCGAATCTCCTCATGGGTCCACACCTGCAAGGCTTCAAAGGCTAAATCAGAATCTTTTGAGAGTTCATGAACAAGCTTTCTCTTTTCATCAACACTCAT
CDS Sequence
- >BnaC03G0513300ZS
ATGAGTGTTGATGAAAAGAGAAAGCTTGTTCATGAACTCTCAAAAGATTCTGATTTAGCCTTTGAAGCCTTGCAGGTGTGGACCCATGAGGAGATTCGACAGGTCTTATGCGCAGAGTTGGGTAAAGAAAGAAAGTACAAGAACCTGACGAAAGCTCAGCTCATCAACAGCCTCTTGAAAACTGTATCAGAGAAAAAAGCTCCAACGCCTCCTATTAAAGGAAACTCTGGAGGAGATCAAGAAGACAGGAAGAGAGACTCATCAACAACAACAAAAACAACTAAGAGAAACTCAAAAAGACAAAGGAAGAACGCTACTCCTACTCGCTATGTGAGCGCTGAATCGGTTAATAAAGCTAAAGGCGGTAGTATCTACTGTAAGAACTTGGCTTGTCAAGCTGTGCTGAGACAAGAAGACTTGTTCTGTCAAAGGTGTTCTTGTTGTATCTGCCATAAGTATGATGACAATAAAGATCCTAGTCTCTGGTTAACTTGCGGTTCCGATCCTCCGTTCCCCGGTGAGTCTTGTGGCTTGTCTTGCCATCTGGATTGTGCTTTCAAGACTGAGAAATCAGGTCTCAAGCCAAGTAGTGACGTTGATGGATGCTTCTCCTGTGTCTCTTGTGGCAAAACAAACAGCTTGCTTGAGTGTTGGAAGAAGCAAATGTTGATTGCAAAGGAAACCAGAAGCGTTGACGTGCTTTGTCAACGTCTTGTATTGGCTCAGAAGCTTCTCAAGGGCACGGAGAAGTACAGAAAACTATCTGAGACCGTGGAGGAAGCTGTGAAGAGTTTGGAAACTGAGTTGTGTGGTGGTCCCCTTACTGATCTCCCATCGGCAATGTGTAGAGGAAACGTAAACAGGCTTGGCTCAGCGCCACAAGTGAAGGATCTTTGCTCTTCTGCTTTGAAATCCCTCCAAGATACACCGCTTGATGAAACCAAAGTCTTGACCAGAACCCTTCAAGAAGAAGAGGAAGCAGCTTTTGTGAGTAGCTTAAGCACTAAAGAAGAAGAAACTGTTCCAGAGAAGCTGGTCAATGTTAAGAGTTCAATAAGCTGCGGTTTTGGGCTGGAGGATTGTGTGAAGATTATGAGACAGCTTGAGTGTTCAGGTCATGTTGATAAGAGTTTCAGACAGGAGTTTCTGACTTGGTATAGCTTAAGAGCCAGTGCTCAGGAGATGAACGTTGTGAAGACATTCATTGATGCTTTCAAGGACGATTCAGTAGCTTTAGCTGAGCAGCTCGTTGACACGTTCTCTGATTGCATATCAAGAAAGCGGTGA
Protein Sequence
- >BnaC03G0513300ZS
MSVDEKRKLVHELSKDSDLAFEALQVWTHEEIRQVLCAELGKERKYKNLTKAQLINSLLKTVSEKKAPTPPIKGNSGGDQEDRKRDSSTTTKTTKRNSKRQRKNATPTRYVSAESVNKAKGGSIYCKNLACQAVLRQEDLFCQRCSCCICHKYDDNKDPSLWLTCGSDPPFPGESCGLSCHLDCAFKTEKSGLKPSSDVDGCFSCVSCGKTNSLLECWKKQMLIAKETRSVDVLCQRLVLAQKLLKGTEKYRKLSETVEEAVKSLETELCGGPLTDLPSAMCRGNVNRLGSAPQVKDLCSSALKSLQDTPLDETKVLTRTLQEEEEAAFVSSLSTKEEETVPEKLVNVKSSISCGFGLEDCVKIMRQLECSGHVDKSFRQEFLTWYSLRASAQEMNVVKTFIDAFKDDSVALAEQLVDTFSDCISRKR