Information report for Pp3c13_15440
Gene Details
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Functional Annotation
- Involved in the promotion of the transition of the vegetative meristem to reproductive development. Four forms of the protein (alpha, beta, delta and gamma) are produced by alternative splicing. Involved in RNA-mediated chromatin silencing. At one point it was believed to act as an abscisic acid receptor but the paper describing that function was retracted.
Homologous
- Actinidia chinensis: CEY00_Acc22900, CEY00_Acc33056
- Beta vulgaris: BVRB_3g054450
- Citrullus lanatus: Cla97C06G113890
- Cucumis melo: MELO3C021258
- Juglans regia: Jr12_10120, Jr12_10140, Jr12_10090, Jr12_10130
- Lactuca sativa: gene-LSAT_6X261
- Manihot esculenta: MANES_03G206500, MANES_15G001500
- Populus trichocarpa: POPTR_010G147900v3
- Prunus persica: PRUPE_1G114600
- Vitis vinifera: VIT_05s0077g00710
Gene Resources
- Pfam: PF00076 PF00397
- UniProt: A0A7I4AKX9
- RefSeq: XP_024392960.1
- EMBL: ABEU02000013
- AlphaFoldDB: A0A7I4AKX9
- InterPro: IPR000504 , IPR001202 , IPR002343 , IPR012677 , IPR035979 , IPR036020 , IPR047193
- PANTHER: PTHR24012
- SUPFAM: SSF51045 , SSF54928
- PROSITE: PS50020 , PS50102
- Gene3D: 2.20.70.10 , 3.30.70.330
- OrthoDB: A0A7I4AKX9
- CDD: cd00201 , cd12633
Sequences
CDS Sequence
- >Pp3c13_15440
ATGCAAGCAGCCCCTGCGACGGTGCTACCCCCTCCGTATTCTGCTGGAATGCAAGCAGCGTCGCCTCAACAGCAGCAGCAGCAGCAGGTCTACCCCCAGCCAGTGTTGACGCAGCATCAACTACCACCGCAGCAGGTTCAGATTCCAATGCAGGACGGCTATGGAGCTGCAGTCGCGGGGAGCATCCATTCAATGCTGCTTGCTCACGGCCTCAACCACAGTGCGGTCTCCTTGTCTGGTCAGAAGCGAGATAGTTCTGGTGCTCCTGTGCACGGCGGCCGCGATACGACCGATGGTTCTTTTGTGAAACTTTTTGTTGGGTCTGTGCCCCGAACAATTACGGAAGATGAGGTGCGACCAATGTTTGCTGAGCACGGAAACGTACTTGAAGTTGCCATAATCAAGGACAAAAGAACAGGAAATCAACAAGGATGTTGCTTCGTTAAGTATTCTACTGTTGAGGAGGCGGAGAGAGCAATCAGGGCTCTCCATAATCAGAAAACGTTGCCTGGGGGGGTTTCACCAGTACAAGTGCGTTATGCTGATGGAGAGCGTGAACGACTTGGGGCTGTTGAACATAAACTGTTTGTTGGTTCACTCAACAAGCAAGCCTCCGAGAAGGAAATAGAAGAGCTTTTTATTCCCTATGGCCGAGTTGATGATGTCTACATCATGAGGGATGAGCAGAAGCAGAGCCGAGGCTGTGCTTTTATTAAATATTCTCAAAGGGATCATGCCCAAGCAGCAATCAATGCTCTGAATGGAGTTCACATAATGCAAGGTTGCGACCAGCCATTGGCTGTTCGCTTTGCTGATCCCAAGCGACCGAAGGGTGGGGATGCGAGAGTTGGCGGTCCAGGTTTTGGTGGCCCAAGTTTTAGTCCTCGCCAAGGATCGCAAGGTCAACAAGTGCAAGGAGGTTTACGGCCTATGCATTCACAAATGGGTCTTTCAGCTGGTCGGGTCCCACAATTGAGTTGGAGACCTCAAGGAGTAGTCGGTTATGGTCATCTCCAAGTAGTTCCTAGTCCATATGGGCCTAGAGGAGGACCTGTTACTGGTGTGCCGCAGATGGTAAGTCAAGGAGGCTACCAACAGGCACCTCAACAAAGGCCTCAGCAACAGTACGTCCTTCAGCCTTCACAGCAACAACAGCAACCGATACAACAGATTCAGCAGCAATCTCAGGCTTACATGCCGCAACAGGGTCCTCCACGGCCAATAATTCAATTACAGCCAGGAGGCCAGCAGCAGTCGCAACAACCACAAATGTTGATGCAGTTGCAATCGCAACCTGCTCAGCTGCAACGACAGCAGCAGCAGCTATCTGAGCAGGTTGCACTCCAGCCAGTGGGTCAGCTACAAGCTTTGCAACCTGGGCAGCAGCACACCCAGCAGCAATTACAGCCGCAGCAGGTGTACCATCAAGTGCCTCAACCTCAACAGCTTCAGCAGCCTGCCTATTATCTTCCTGTTCAGCATTCTCAAGCTCATGCTCCTGTGGCTGCTCCTCAACCTCCAGCCCCGCAACTCACATGTGATTGGTCGGAGCACACTTCTCCTGAAGGCTACAAGTATTATTATAACAGCACAACTAGAGAGAGCAAGTGGGAGAAACCGGAGGAGCTGAAGGCTTTTGAACAGCAACAGCAGCTGACACAAGTAACATTACCAGCAGCCACCAGCACTTCTGGAATGGGCTACATGCATTCACAACCTGTCACCAATGGCTCTGCAGAACTGCCTAGGCAGCAGGAAATATCATCAATGTCAAACTGGGGGTGGAGAGGAAAAGTAGCCGGAACAGGGGACTCGGGTCCGTAA
Protein Sequence
- >Pp3c13_15440
MQAAPATVLPPPYSAGMQAASPQQQQQQQVYPQPVLTQHQLPPQQVQIPMQDGYGAAVAGSIHSMLLAHGLNHSAVSLSGQKRDSSGAPVHGGRDTTDGSFVKLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIRALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFIPYGRVDDVYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQGCDQPLAVRFADPKRPKGGDARVGGPGFGGPSFSPRQGSQGQQVQGGLRPMHSQMGLSAGRVPQLSWRPQGVVGYGHLQVVPSPYGPRGGPVTGVPQMVSQGGYQQAPQQRPQQQYVLQPSQQQQQPIQQIQQQSQAYMPQQGPPRPIIQLQPGGQQQSQQPQMLMQLQSQPAQLQRQQQQLSEQVALQPVGQLQALQPGQQHTQQQLQPQQVYHQVPQPQQLQQPAYYLPVQHSQAHAPVAAPQPPAPQLTCDWSEHTSPEGYKYYYNSTTRESKWEKPEELKAFEQQQQLTQVTLPAATSTSGMGYMHSQPVTNGSAELPRQQEISSMSNWGWRGKVAGTGDSGP