Information report for LR48_Vigan967s003900
Gene Details
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Functional Annotation
- Encodes a U1 small nuclear ribonucleoprotein (snRNP) factor involved in alternative splicing.
Homologous
- Citrullus lanatus: Cla97C06G110750
- Cucumis melo: MELO3C022388
- Cucumis sativus: CsGy6G007040
- Glycine max: Glyma.03G167000, Glyma.19G168100
- Gossypium hirsutum: Gohir.D07G210300, Gohir.A07G204300
- Juglans regia: Jr10_24680, Jr01_32840, Jr01_32860, Jr01_32800, Jr01_32810, Jr01_32830, Jr01_32820, Jr01_32850
- Medicago truncatula: Medtr7g098430
- Prunus avium: Pav_sc0002181.1_g210.1.mk
- Prunus persica: PRUPE_8G215900
Gene Resources
- Pfam: PF05843
- UniProt: A0A0S3RYC4
- EMBL: AP015037
- AlphaFoldDB: A0A0S3RYC4
- InterPro: IPR003107 , IPR011990
- PANTHER: PTHR17204 , PTHR17204:SF5
- SUPFAM: SSF48452
- Gene3D: 1.25.40.10
- OrthoDB: A0A0S3RYC4
Sequences
CDS Sequence
- >LR48_Vigan967s003900
ATGGCAGATAGTGAATCCGTTGCTACCGAAGCATCCGCTCATTCCGCTGCTGAGGCATATGCTTCGGCTGGTTATGCCGAGTCTGGGTCAAATCCTACTCTCGAGGCAGGTGCTACTGCTGATCAACCGGCTGGAGAAGGAGCTCAGTCCACTTCAACGTATGGATTTGGTTATTCTAATACTGGTGATGTGAATGCGTATACTGGGGATCCGAATTCTGTTCTACAGCAATCCCAATTCAATGCTACTGGTGATACCAAGCCAGCTGGTGGAGTGCCAGATGCTAACGAAGCCTCTGCTGGGGTTGGAAGCACTGCTGCTGAGCCTGCTCTGGCTTCTAACTACAGTTCATCTGTCAACGGTGGTGTAGTCGGTTCAGTGACGAACGGACTTGAAAACGGAAATGCATTGGAAAACATTGACGGGTCGGTTGATGAAAAACAACTCGCAGATGGCTACGGAGCTGCCTTGTCTGCTGAGGAAGATCGACTGTGGAATATTGTAAGAGCTAATTCTTTAGATTTCAGTGCCTGGATTTCCTTGATTGAAGAGACAGAGAAGGTAGCCGAGGACAATATTCTGAAGATTCGAAGAGTTTATGATTCCTTTCTAGCAGAATTTCCCTTGTGCTACGGTTATTGGAAGAAATATGCTGACCATGAGGCACGACTTGGCTCTATAGATAAAGTTGTTGAGGTGTATGAGCGTGCTGTTCAAGGGGTTACATATTCAGTGGACATTTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCCGACACTGTTCGTAGGCTTTTCGAACGAGGATTGGCTTATGTTGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAGGACTGGGCTCGCCTTGCCATAATTTACACCAGAATATTAGAGAATCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAGGAGTTAGCTGGAAACCGACCTTTGTCAGAGTTACGAACTGCTGAAGAAGCTGCTGTAAGTGTTGCTTCAGAGGCTACTGCTGGACAAGGTGCTGAGGGAGAGGTTCATCCTGATGGTGCAGAGAAGTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATAAGAGAAGAGATCTATAAAAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCCATCCGAAGGCCCTATTTTCACGTCCGGCCTCTCAATGTTGGAGAGCTCGAAAATTGGCACAACTATCTGGACTTTTTAGAAAGGGAAGGTGACATAAGCAAGATTGTCAAGTTGTATGAGAGGTGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGCTATGTTTTGTGTATGGAAGCCAGTGGAAATATGGATCTTGCAAATAATGTTCTTGCCCGAGCCACCCAAGTCTTTGTTAAGAGACAACCGGAGATACATCTTTTTTCTGCGCGGTTTAAGGAGCAGAATGGAGATATAGAGGGTGCTAGAGCTGCCTATCAGCTTGTGCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACGCCGATTGGGAAAAATGGAGGATGCCTTCTCCTTGTATGAACAGGCCATAGCTATTGAGAAAGGAAAAGAACATTCACAAACATTACCGATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGGAATGCAGAGAAGGCAAGACAGATTTTAGTTGAGGGGCTGGAGAATGTTTTGTTGTCAAAACCAGTTCTCGAGGCCTTATTGCATTTTGAGGCTATTCAACCCTTTCCAAAGCGAGTTGATATCGACTTTCTGGAGTCATGGGTTTGCAAATTCATAATGCCTAACTCAGAGAGTCCTAGTGTAGCTAGTGCAATTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTGAATCTCTTTGGAGATGTTCAATCAATCAAGAGAGCAGAGGATATGCATGCCAAATTGTTTTTGCCACACAGAAGCATGTCAGAGTTGAAGAAACGTCATGCTGAGGATTTCTTAGCTTCAGACAAAGTTAAAGCGTCAAGAACTTATTCTGCTCAATCACCTGCCCAATCCGTGATTGGTGCGTATCCAAATGCACAAAACCAATGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCGGTTACACAAGCACAGGGGCAACAGTGGACTGCTGGCTACACCCAGCAGGCTTCTTATGGGGCTTATGCTGGATATGGCGGCAATTATGCAAATTCTCAATTGCCCGCATCAGTTCCACCGAGTACTGCATACGGGGCCTATCCTCCTTCTTATCCTGCACAGCCGGCGGTTCCTCAACAGCCCTATGCGCAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGTAGTTATTACTGA
Protein Sequence
- >LR48_Vigan967s003900
MADSESVATEASAHSAAEAYASAGYAESGSNPTLEAGATADQPAGEGAQSTSTYGFGYSNTGDVNAYTGDPNSVLQQSQFNATGDTKPAGGVPDANEASAGVGSTAAEPALASNYSSSVNGGVVGSVTNGLENGNALENIDGSVDEKQLADGYGAALSAEEDRLWNIVRANSLDFSAWISLIEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDIWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTAEEAAVSVASEATAGQGAEGEVHPDGAEKSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFLEREGDISKIVKLYERCVIACANYPEYWIRYVLCMEASGNMDLANNVLARATQVFVKRQPEIHLFSARFKEQNGDIEGARAAYQLVHTETSPGLLEAIIRHANMERRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPVLEALLHFEAIQPFPKRVDIDFLESWVCKFIMPNSESPSVASAIEREELSSIFLEFLNLFGDVQSIKRAEDMHAKLFLPHRSMSELKKRHAEDFLASDKVKASRTYSAQSPAQSVIGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPASVPPSTAYGAYPPSYPAQPAVPQQPYAQPVAAPAQQPAAVPQAYYGSYY