Information report for Jr10_24680
Gene Details
|
|
Functional Annotation
- Encodes a U1 small nuclear ribonucleoprotein (snRNP) factor involved in alternative splicing.
Homologous
- Citrullus lanatus: Cla97C06G110750
- Cucumis melo: MELO3C022388
- Cucumis sativus: CsGy6G007040
- Glycine max: Glyma.19G168100, Glyma.03G167000
- Gossypium hirsutum: Gohir.A11G133300, Gohir.D07G210300, Gohir.D11G139400
- Manihot esculenta: MANES_13G040100
- Medicago truncatula: Medtr7g098430
- Populus trichocarpa: POPTR_014G192800v3
- Prunus avium: Pav_sc0002181.1_g210.1.mk
- Prunus persica: PRUPE_8G215900
Gene Resources
- Pfam: PF05843
- UniProt: A0A2I4DL48
- RefSeq: XP_018807879.2
- KEGG: jre:108981226
- InterPro: IPR003107 , IPR011990
- PANTHER: PTHR17204 , PTHR17204:SF5
- SUPFAM: SSF48452
- Gene3D: 1.25.40.10
- STRING: 51240.A0A2I4DL48
Sequences
CDS Sequence
- >Jr10_24680
ATGGGAGACAGCGAAACAGTCGTATCTGAGCCTTCTGCCATGATGGACTATACATCCACTGGCTATTCTGATGCCAGCTCAAATGTTGTTCCCAACACTGGGGCTTCCCCTTCTGAAGCTACTGGGGTTTTTTCTGCATCTACTGCACCGGCTGATATAAGTTCTGCTATTCGTGGTGGTTCTGATTTGGGAGATGGAAATGTACATGGTACAGATCCTGATCCCAATATACAAGAAGCACATGTGATTACAACATCTGAAGCTAACCTAGCTGCTGAAGTTGCTAATACTAGTGAGAAAGTCACTGATCTGGAAAATGCTGCAACAGAATTCTCTCAAGCTGGTGGTAATATATCATCTCTGAATGGTACTGATGGTATAAGAGTTGAGAATGGACATGTTTCAGATCATGTAGGTAGATCTGCGGATGAGCAACAGTTTGATGGTTTTGTACCAGCTGTGTCTGCTGAAGAAGATCGACTGTGGAACATTGTGAGGGCTAATGCTTTAGATTTTAATGCATGGACTTCCCTAATTGAAGAGACCGAGAAGGTGGCGCAGGAGAACATTTTGAAAATCCGAAAAGCTTATGATGCTTTTTTGGCAGAATTTCCTTTGTGTTATGGTTATTGGAAAAAGTATGCAGACCATGAGGCTCATCTAGGCTCTGTTGAGAAAGTAGTGGAGGTTTATGAACGGGCAGTACAAGGAGTGACATATTCGGTGGATATTTGGTTGCATTATTGTATATTTGCCATTAGCACATACGGGGATCCAGAAACCATCCGTAGGCTCTTTGAACGAGGATTAGCTTATGTTGGAACAGATTACCTGTCATTCACACTTTGGGATAAATACATCGAATATGAGTACATGCAGCAAGAGTGGGGCCGTCTTGCTATGATTTACACCAGGATTTTGGAGTATCCAAATCAACAATTGGATCGCTATTTTAACAGCTTCAAGGAGTTAGCTGGAAGTCGACCTTTGTCTGAATTAAGGACAGCTGAGGAAGCTGCTGCTGCTGCAGCAGCAGCACTTTCAGAGGCTAGTGTCCAAGCCAATGAGGGAGAGGTTCATCCTGATGCTACGGAACAATCTCCTAAACTTGTAAGTTCTGGCTTAACGGAGGCAGAGGAGTTGCAGAAGTATATCGCCATCAGAGAAGAGATGTATAAGAAGGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCAATTAGGAGACCCTACTTTCATGTGCGGCCTCTAAATGTTGCAGAGCTTGAAAATTGGCATAGCTATTTGGATTTTATGGAAAGGGAAGGAGACTTTAACAAGGTGGTCAAGTTATATGAAAGATGTTTGATTGCATGTGCCAATTATCCCGAGTATTGGATGCGTTATGTTTTATGCATGGAAGCTAGTGGAATGTTGGATCTCGCAAATAATGCACTTGCTCGTGCATCTCAAGTGTTTGTCAAGAGACAACCAGAGATTCACCTTTTTGCTGCTCGGTTTAAGGAGCAAATTGGGGATATACCTGGTTCTCAAGCTGCCTATCAACTTGTTCATACTGAAATCTCTCCTGGTCTCATTGAAGCAATTATTAAGCATGCAAATATGGAATATCGGCTGGGGAATCTGGAAGATGCCTACTCATTGTACGAACAGGCCATTGCTATTGAAAGAGGAAAAGAACATTCACAAACATTACCGATGTTGTATGCACAATATTCTCGGTTTGTATACATGATTTCTGGTAATGAAGAAAAGGCTAGGGAAATTCTACTTCAAGCACTTGAGCATGTGCAACCGTCCAAACCACTTCTTGAGGCTTTAATACATTTTGAGGCAATTCAGTCCTTACCAAAGAGAATCAATTATCTAGATTCGTTGGTTGTTAAGTTCATAGTTCCTGACCTAGAGAGCCCCAATGTTGCTGGTCCAGCTGATAGGGAAGAGCTTTCTTGCATTTATTTGGAGTTTCTGAATGTCTTTGGGGATGTACAATCCATCAAGAAGGCTGAGGATCGGCATGCTAAGCTTTTCTTGCCTCATCAGAGCACTTCAGAGTTGAAAAAACGCCATGCAGAGGATTTTCTAGCATCAGATAAGGCCAAAATAGCCAAGTCTTATTCTGTTCCTTCACCTGCGCAGTCCTTGATGGGTGCATATCCAAGTGCACAAAGCCAATGGACTGCTGGTTATGGTTTGCAGCATCAAGCTTGGCCAGCTGCTACGCAAGGACCAGTTCAACAGTGGGCCCCTGGCAATACACAACAGGCTGCATACGGTGCATATAGTGGTTATGGAAGTAGTTACACTAATCCACAAACGGCAGCATCAGCACCACAAACTGCCGCTTATGGGGCTTATCCTACTACATATCCTGCGCAGGCTTTCCCACAACAAAGTTATGCACAGCCCACTGCAGTAGTAGCCGCCCCACTGCAGCAACCCGCGTCAGTTCCGCAGGCCTATTATGGGAGTTACTACTGA
Protein Sequence
- >Jr10_24680
MGDSETVVSEPSAMMDYTSTGYSDASSNVVPNTGASPSEATGVFSASTAPADISSAIRGGSDLGDGNVHGTDPDPNIQEAHVITTSEANLAAEVANTSEKVTDLENAATEFSQAGGNISSLNGTDGIRVENGHVSDHVGRSADEQQFDGFVPAVSAEEDRLWNIVRANALDFNAWTSLIEETEKVAQENILKIRKAYDAFLAEFPLCYGYWKKYADHEAHLGSVEKVVEVYERAVQGVTYSVDIWLHYCIFAISTYGDPETIRRLFERGLAYVGTDYLSFTLWDKYIEYEYMQQEWGRLAMIYTRILEYPNQQLDRYFNSFKELAGSRPLSELRTAEEAAAAAAAALSEASVQANEGEVHPDATEQSPKLVSSGLTEAEELQKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWHSYLDFMEREGDFNKVVKLYERCLIACANYPEYWMRYVLCMEASGMLDLANNALARASQVFVKRQPEIHLFAARFKEQIGDIPGSQAAYQLVHTEISPGLIEAIIKHANMEYRLGNLEDAYSLYEQAIAIERGKEHSQTLPMLYAQYSRFVYMISGNEEKAREILLQALEHVQPSKPLLEALIHFEAIQSLPKRINYLDSLVVKFIVPDLESPNVAGPADREELSCIYLEFLNVFGDVQSIKKAEDRHAKLFLPHQSTSELKKRHAEDFLASDKAKIAKSYSVPSPAQSLMGAYPSAQSQWTAGYGLQHQAWPAATQGPVQQWAPGNTQQAAYGAYSGYGSSYTNPQTAASAPQTAAYGAYPTTYPAQAFPQQSYAQPTAVVAAPLQQPASVPQAYYGSYY