Information report for GSCOC_T00041922001
Gene Details
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Functional Annotation
- Encodes a vernalisation insensitive 2‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Actinidia chinensis: CEY00_Acc23217
- Glycine max: Glyma.07G089000
- Gossypium hirsutum: Gohir.D05G023000, Gohir.A05G021500
- Juglans regia: Jr10_21400, Jr10_21410, Jr01_28800, Jr01_28810
- Manihot esculenta: MANES_16G070600, MANES_03G068900
- Populus trichocarpa: POPTR_018G076500v3
- Prunus avium: Pav_sc0000212.1_g140.1.mk
- Vitis vinifera: VIT_11s0016g04240
Gene Resources
- Pfam: PF07227 PF00041
- UniProt: A0A068U5A8
- EMBL: HG739093
- AlphaFoldDB: A0A068U5A8
- OMA: SENWAVK
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF1
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: A0A068U5A8
- CDD: cd00063
- STRING: 49390.A0A068U5A8
Sequences
CDS Sequence
- >GSCOC_T00041922001
ATGGATTTGGAAGATAAATTTCTTGCTAAAGTTTCTGGCATTCAAAGTCTATCTTCCAGTGTGCACAGCACTCCGGAGAAAAATGGACAGTCAGATGATGCTTCTAGAAGCCCCAAGGTACTCCAAGAATTTCTAAAATCTGGTGCAAGGAAGGATCTGTTGCATACTTGCTTGGAAAAGGAAAAGAAACAATCAGCTTCATCAAAGTGCAAAATGTCTGAACCAGCTACAAAAATTAGCAAAAAACCAATTAAAAACCAGGATCAAAAGAAAACAGCTTCAAGTCCCAAAGATCAACCTTTGAAAAAACAAAATAGAAAGGCTGAAAACCCTGTCCGCATTCCCCCCACAACAGAACAATGTGCTGATTTTAAATGTTCAAATTCATGGATATGCAAAAATTCTGCATGTCGAGCAACTCTTTCCATAGAAGACACATTCTGTAAGCGGTGCTCTTGCTGCATTTGTCACTTATTTGATGACAACAAGGATCCAAGTCTTTGGTTAGAATGTGCATCTGAATCTGGCCAGGGGGACTACTGTGGCCTATCTTGCCACATTGAATGTGCTCTCCAACGTGGGAAGGTGGGGGTGGTCGATCTTGGACAACTGATGCAGCTAGATGGAAGCTATTGTTGTGCTGCTTGTGGTAAAGTTTCAGGGATACTTGGATACTGGAAGAAACAGCTAAATATAGCGAAGGATGCTCGTCGAGTGGACGTCCTGTGCTATCGGATATTTCTGAGTTATAGGCTCCTGGATGGGACTTCCAGATTTAAAGAACTCCATGAAATTATTAAAGAAGCCAAGGCCAAGTTAGAAACAGAGGTCGGCCCAGTTAATGGAGTTTCTGCCAAGATGGCCAGGGGAATTGTCAGCAGACTTTCTGTTGCAGGCAATGTCCAGACGCTCTGCTCCCTTGCCATTGAGAAAGCTGATGAATGGCTGACCTCAAAGTCCAGTGCCACCGCAGATTACAGAGAGGGTTCATTGCCTGCTGCTTGCAGATTCTTGTTTGAGGAAGTAACATCTACTTCAGTTGTAATTGTATTGATAGAGCTTTCTAGTGTATCCTCCAATGATGTCAAGGGCTACAAGCTTTGGTATTGTAAGAGTAGGGAAGAAAATTACACCAAGGAGCCTGTTTGTGTATTTCCAAGAGCTCAAAGGAGGATTTTGATATCCAATTTGCAGCCCTGCACCGAATACTCCTTCCGCATAGTTTCTTATATGGAGGGAGGTGACTTGGGGCACTCTGAGGCCAAGTGCTTCACCAAGAGCAGAGAGATAATTCACAAGAATTCCAATTCAGTTGCAGAAAATCATAGCCATAGGAAGGAGAATCCAGATTCTGGAGGAAGCTCAAGTGCTGAGATGGAGCACAGAACTCCTACTGCCATTGAATCTGACTCCGGTTTTAAAGTCAGGGACCTTGGAAAGATCTTGAGACTGGCTTGGGCTCAAGAACAAGGCTGTTTTGAGAGATTCTGTGGGGCAGATATTGTTAGATGTAGTAGTGTTAGTAAAGTTATTAAACCAGAAAGCATACAAGAAGACGTCCCATCTGTTTCACGTGAACTTGATTTAAATGTTGCTTCAGTTCCCGATCTAAATGAAGAGGCAGCTCCTCTAATTGAGTCATCAAGAGATGAAGATAATGTTTCTCATGACATTGAGAAAAATGGTGTAGCAAGGTCGCATGGTAGTGGTGACTCCCAAAACTGGAACCATGGGCAGAATGGAGAGGTGCCTGCTGTCGACTCTAAGGTGGAAGCAAGCCGAAAGAGAGCAGCTAGCAATGGAGAGACACATGATTCTGATAGCACTCTTATAAATGGATCACCATTTCGAGTGCGGAATGGACCGGGTTGCCTGGATGAGAATTTTGACTTGAGATCAACCGACCAAGAACGCAGGGTGGTAAACACTTTTATTCAAACTCTACTTGATGATCCAAGTAGCTTGGCTGGACAATTGGTTGACTCGTTTACTGATATAATATCAAGCAAGAGGCCTCGAAATGGCTTCTGCAGCAGGCTTTGGCATTAG
Protein Sequence
- >GSCOC_T00041922001
MDLEDKFLAKVSGIQSLSSSVHSTPEKNGQSDDASRSPKVLQEFLKSGARKDLLHTCLEKEKKQSASSKCKMSEPATKISKKPIKNQDQKKTASSPKDQPLKKQNRKAENPVRIPPTTEQCADFKCSNSWICKNSACRATLSIEDTFCKRCSCCICHLFDDNKDPSLWLECASESGQGDYCGLSCHIECALQRGKVGVVDLGQLMQLDGSYCCAACGKVSGILGYWKKQLNIAKDARRVDVLCYRIFLSYRLLDGTSRFKELHEIIKEAKAKLETEVGPVNGVSAKMARGIVSRLSVAGNVQTLCSLAIEKADEWLTSKSSATADYREGSLPAACRFLFEEVTSTSVVIVLIELSSVSSNDVKGYKLWYCKSREENYTKEPVCVFPRAQRRILISNLQPCTEYSFRIVSYMEGGDLGHSEAKCFTKSREIIHKNSNSVAENHSHRKENPDSGGSSSAEMEHRTPTAIESDSGFKVRDLGKILRLAWAQEQGCFERFCGADIVRCSSVSKVIKPESIQEDVPSVSRELDLNVASVPDLNEEAAPLIESSRDEDNVSHDIEKNGVARSHGSGDSQNWNHGQNGEVPAVDSKVEASRKRAASNGETHDSDSTLINGSPFRVRNGPGCLDENFDLRSTDQERRVVNTFIQTLLDDPSSLAGQLVDSFTDIISSKRPRNGFCSRLWH