Information report for POPTR_018G076500v3
Gene Details
|
|
Functional Annotation
- Encodes a vernalisation insensitive 2‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Citrullus lanatus: Cla97C11G209060
- Cucumis melo: MELO3C004546
- Glycine max: Glyma.07G089000, Glyma.05G232400
- Gossypium hirsutum: Gohir.D05G023000, Gohir.A05G021500
- Juglans regia: Jr10_21400, Jr10_21410, Jr01_28800, Jr01_28810
- Manihot esculenta: MANES_16G070600, MANES_03G068900
- Prunus avium: Pav_sc0000212.1_g140.1.mk
- Rosa chinensis: RchiOBHm_Chr2g0091001
- Vitis vinifera: VIT_11s0016g04240
Gene Resources
- Pfam: PF07227 PF00041
- UniProt: A0A2K1WXH6
- EMBL: CM009307
- AlphaFoldDB: A0A2K1WXH6
- OMA: SENWAVK
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF1
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: A0A2K1WXH6
- SMR: A0A2K1WXH6
- CDD: cd00063
- STRING: 3694.A0A2K1WXH6
Sequences
CDS Sequence
- >POPTR_018G076500v3
ATGGACTTAGAGGATACATTCCTTGCTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGCACCCCAGAAAAAAATGGCAATTCAGATGATGCTTCAAGAAGTCCAGAACTCCTTCAAGAGTTCTTAAAATCTGGTCCCAAAAAGGAACTTCTTCGAACTTGCTTGGATAAGGACAAGAAACAGACAGCTTCATCAAAAAGCAAAATGACAGAACTTATGAAGACAGGTAACAAAACTACCAAGAAGCAGGAAACTAAAAAAGCTTCTTCCAGTCCCAACAATCAACCTTCTTTTAAGAAGCAACAAAGAAAAGGGGAAAATCCTATGAGACTTGTACCTGCTTCTGAGCAGTCACCCGATTTTGGATGTTCAAACTCATGGATATGTAAAAATTCAGCTTGTAGAGCTGTTCTATCCATTGACGACACGTTTTGCAAGAGGTGCTCATGCTGTATTTGTCATTTATTTGATGACAATAAAGACCCTAGTCTCTGGTTGGTTTGCACATCTGAAAGTGGTCAGGGGGACTCCTGTGAGCTATCTTGTCATATTGAATGTGCCCTTCAACGTGAAAAGGTGGGGGTTGTTGACCTTGGCCAATTGATGCAGCTAGATGGTAGTTATTGTTGTGCTTCTTGTGGTAAAGTTTCAGGGATTCTCGGAAGTTGGAAGAAGCAGCTACTTATAGCAAAGGATGCTCGTCGACTTGATGTGCTCTGTTATAGGATATACTTGAGCTACAGGCTACTTGATGGGACTTCAAGGTTTAAAGAACTGCATGAAATTGTCAAGGATGCCAAGGCCAAACTTGAAATAGAAGTGGGTCCAGTAGATGGTGTTTCTGCCAAGATGGCACGTGGCATTGTCAGCAGACTCTCTGTCGCTGGTGATGTGCAGAAACTATGCTCTCTTGCAATTGAAAAGGCAGATGAATGGCTCACTACCATCTCTAGTGCAAACCCAAATTGCAGAGAGGATTCCCTTCCTGCTGCTTGCAGATTCTTATTTGAAGAAGTGAAGTCCTCATCTGTTGTAATTATTTTAATTGAATTGTCTATTGCATCATCTGCTGACATTAAGGGCTACAAACTCTGGTATTGCAAGAGTAGAGAAGAGACACATGCAAAAGAACCTATTTGCGTGTTTCCAAGATCTCAGAGGAGGATTTTGATCTCTAATCTACAGCCTTGTACAGAGTATACTTTTCGGATTGTTTCTTATACAGAGGCTGGTGACTTGGGGCACTCCGAAGCAAAGTGTTTTACCAAGAGCATAGAGATAATTCACAAAAATCCCAATCCTTCAGTTGCAAGGAATAGTAAGAAAGAGAATACCATCACTGGAGGATGTACTTCTAGCTACAACAGGGATTCTGAAACTGCAACTGGAGTTAATTCTTCTGGATTCAAGGTTCGTGATCTTGGAAAGATCCTCCATCTGGCTGGGGCTCAACAGCAAGGCTGCTTTGAAGGTTTCTGCAGTGCTGATACTGAAAAATGCTGTGGAGCAAGTAAACTGGTCAAGCTTCAAACTTCAGAAGATCCAGTGCCATCTGTTTCACATGGGCTAGACTTAAATGTTGTTTCCATGCCTGACTTGAATGAAGAGCTGACTCCTCCATTTGAGTCCTCCCGTGATGAGGATAATGGGTGCACTTTGGAGCAGGCCATTGAGGCAGATGATGATGCTGCTTCTCATGAGGTGGAGAAAAATGGTTTAGCGACATCTCATGGTAGTGGTGACTCCCAGACCTGGATGCATGGGCCAAGTGGGGAAGTGCCTACTGTTGATTCCCGGTCGGAGTTGTGCAGGAAAAGGGCTGCACACGCAAATGAAGACTTGCATGACTGTGATAGCACGTTGATAAATGGATCACCATTCCATGTGTCCAGTGGCTCAGGTTACCTGGATGAGAACTTTGAGTACTGTGTGAAGACAATCCGATGGTTGGAATGCGAGGGTCACATTAACCAGGAATTTAGATTGAAATTGCTGACATGGTTTAGTTTGAGATCAACAGAACAAGAACGTAGAGTGGTTAACACCTTCATCCAAACTTTGATCGATGATCCCAGTAGCTTGGCAGGACAGTTGGTTGATTCCTTTTCAGATATCATATCCAGCAAGAGGCCACGGAATGGTTTTTGTGGCAAGCTGTGGCATTAA
Protein Sequence
- >POPTR_018G076500v3
MDLEDTFLAKVSGVQSLSSSVQSTPEKNGNSDDASRSPELLQEFLKSGPKKELLRTCLDKDKKQTASSKSKMTELMKTGNKTTKKQETKKASSSPNNQPSFKKQQRKGENPMRLVPASEQSPDFGCSNSWICKNSACRAVLSIDDTFCKRCSCCICHLFDDNKDPSLWLVCTSESGQGDSCELSCHIECALQREKVGVVDLGQLMQLDGSYCCASCGKVSGILGSWKKQLLIAKDARRLDVLCYRIYLSYRLLDGTSRFKELHEIVKDAKAKLEIEVGPVDGVSAKMARGIVSRLSVAGDVQKLCSLAIEKADEWLTTISSANPNCREDSLPAACRFLFEEVKSSSVVIILIELSIASSADIKGYKLWYCKSREETHAKEPICVFPRSQRRILISNLQPCTEYTFRIVSYTEAGDLGHSEAKCFTKSIEIIHKNPNPSVARNSKKENTITGGCTSSYNRDSETATGVNSSGFKVRDLGKILHLAGAQQQGCFEGFCSADTEKCCGASKLVKLQTSEDPVPSVSHGLDLNVVSMPDLNEELTPPFESSRDEDNGCTLEQAIEADDDAASHEVEKNGLATSHGSGDSQTWMHGPSGEVPTVDSRSELCRKRAAHANEDLHDCDSTLINGSPFHVSSGSGYLDENFEYCVKTIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISSKRPRNGFCGKLWH