Information report for GSCOC_T00041436001
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.
Homologous
- Capsicum annuum: T459_19339
- Glycine max: Glyma.17G062500, Glyma.13G097000
- Gossypium hirsutum: Gohir.D08G030100
- Juglans regia: Jr11_25360
- Manihot esculenta: MANES_S055500, MANES_06G023300
- Populus trichocarpa: POPTR_006G167800v3, POPTR_018G091500v3
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
- Rosa chinensis: RchiOBHm_Chr4g0401761
- Sesamum indicum: SIN_1023828, SIN_1011762
- Vitis vinifera: VIT_11s0052g00830
Gene Resources
- Pfam: PF07227
- UniProt: A0A068U3A0
- EMBL: HG739093
- AlphaFoldDB: A0A068U3A0
- OMA: DRVSMKR
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: A0A068U3A0
- CDD: cd00063 , cd15521
- STRING: 49390.A0A068U3A0
Sequences
CDS Sequence
- >GSCOC_T00041436001
ATGGACAGTTCTTATTTAGAGGGATTGATGCTTGATCCGTCAAAGTGCAGTAAGTTGAGCATGGATGAGAAAAGGGAACTCGTCTATGCTCTGTCAAAATGGTCACATGGTGCACCGGAAATGCTCCAGTCCTGGAGCCGTCAAGAGATATTGGAAGTCCTTTGTGCGGAAATGGGAAAGGAAAGGAAATATACAGGCTTGACGAAACTGAAAATAATAGAGCAGCTTTTGAAAATTGTTTCTGAAAAGAAATCTCAAGAACATGCTGCTGCTATTGATCTTGAAGCTGGAGCTTCATCAGAAGTTCCACAAAAGACTGCCAAAAGGCAGAGGAAAACTGATAATCCCGTTCGCCTGCCTGTTACTGTAAATACAGTCTCCACGAATAATGTCATTGAGGATTTGGAAAATCCTGTATATTGTAAAAATTCAGCTTGTAGAGCCAGACTATTTCATGATGCTGCATTTTGCAAGAGGTGCTCATGCTGCATTTGCCGTAAGTATGATGACAACAAAGACCCTAGCTTGTGGTTGATTTGCAGCTCAGAACCCCCATTTCAAGGTGTATCATGTGGCATGTCATGTCACCTTGATTGTGCCCTAAGACATGAAAGATCTGGCATTCTAAAGGATAAGCTGGATAACAGGCTAGATGGGAGTTTTTATTGTGTAGCTTGTGGAAAAGTGAATGATATCCTTGGATCCTGGCGAAAACAACTATTAATAGCAAGGGATACCAGAAGGGTTGACATACTGTGTTATCGGGTTTCCTTGTGCCGAAAGATTCTTGCTGGTACCAAACATTACCAGAAGTTGTATGACATTGTGGATGAAGCAGTGAATAAGCTTGAAGCAGATGTGGGGCCTTTAACTGGTTTACCAGTGAAGATGGCTAGGGGGATTGTCAACCGGCTATCTTCTGGCCCAGAGGTTCAGAGACTCTGTGCTTTTGCCATTGAGTCACTTGACACCATGCTTTCAGAAAGAGTACCTGATATGTCAGATTGCAAGGTGATGAGTGCTAAATTGGTGACGTTGGAAGATGTCTGCACCTCATCTGTCACTGTGACTCTGAAGTTTGAAGATTCATCTCTTGGAAATTTAGTTGGTTATACCTTATGGCATCGCAAATCTGATGATTTGGACTATCCGACAGAACCTACTTGTACATTGTTTGCTCCAAACTCGAAATTTTATCTCTCTGGTCTATCTCCAGATACAGATTATCATCTCAAGGTTGTATCCCTTGATAGTAATAGGGAGCTGGGGATGTGTGAAGTTAGTTTCCAAACAGCCGCTACTGAAACTGAAGCTACTAATCCCAACTCTAAAGATATGGAAGTTGGAAGGAGTGAAAGTCCAGCGACCAACTGTAGTAGCCTGTCTAATCCCTCATCGGTGGAAGATGAAACTAATAATGTCATTCCGTGCAGCAATGAGGATGAGACTAGAGGGGATAACTATCATGACCATCACAATACCCTTGAAAAAATGGTCTCTACAAAGGTGTATAATGGCTATACAGATACTATTGAAAGAGGACTTACTGGTGAGACGATATCCTTGTTGGATGAGGAACATAGCATGGGAAAAATTTGTTCTGCACCAAATACTGATGCTGTGAATCTTGAGAGCAAGCCCTCACCAGATGGCCAGATGATGGAGGACACCAGCACTGAAAATGGATCAAATACTCCTAGGCAGACTGGGCTGGACTGTGTTCCGCCAGCCGCGGAAGCTCTCCTTCCAATAACACCCTGCAAACTTGATAAGATGAAGGATGGGCTCCAAAGGAGCTGCAGACCCAAGCTCATAATTAAGGACCTTGATATTGGTTCAGGGAAGGAGGAGGAACCACAAGCTGGCAGCTCTTCGAAGAAGAGAAGGCTAGAAAGGCTAGATGACGAATCTGCTGCAGTTGACAAGGATTTTGAGTATTATGTAAAGGTCATCAGATGGTTGGAGTGTGATGGGCATATCGAGACTGGATTCAGGAAGAAGTTCCTGACTTGGTACAGCTTGAGAGCTACCCCGCAGGAGGTGAGGATTGTCAAGGTGTTTGTTGACACGTTTATTGAAGACCCCGATTCCCTCGCAGGACAGCTTGTTGACACCTTCTCTGATGTCATTTCGAACAAAAGATCAACCACTGTACCCGCAGGTTTCTGCTTGAAGCTGTGGCATTGA
Protein Sequence
- >GSCOC_T00041436001
MDSSYLEGLMLDPSKCSKLSMDEKRELVYALSKWSHGAPEMLQSWSRQEILEVLCAEMGKERKYTGLTKLKIIEQLLKIVSEKKSQEHAAAIDLEAGASSEVPQKTAKRQRKTDNPVRLPVTVNTVSTNNVIEDLENPVYCKNSACRARLFHDAAFCKRCSCCICRKYDDNKDPSLWLICSSEPPFQGVSCGMSCHLDCALRHERSGILKDKLDNRLDGSFYCVACGKVNDILGSWRKQLLIARDTRRVDILCYRVSLCRKILAGTKHYQKLYDIVDEAVNKLEADVGPLTGLPVKMARGIVNRLSSGPEVQRLCAFAIESLDTMLSERVPDMSDCKVMSAKLVTLEDVCTSSVTVTLKFEDSSLGNLVGYTLWHRKSDDLDYPTEPTCTLFAPNSKFYLSGLSPDTDYHLKVVSLDSNRELGMCEVSFQTAATETEATNPNSKDMEVGRSESPATNCSSLSNPSSVEDETNNVIPCSNEDETRGDNYHDHHNTLEKMVSTKVYNGYTDTIERGLTGETISLLDEEHSMGKICSAPNTDAVNLESKPSPDGQMMEDTSTENGSNTPRQTGLDCVPPAAEALLPITPCKLDKMKDGLQRSCRPKLIIKDLDIGSGKEEEPQAGSSSKKRRLERLDDESAAVDKDFEYYVKVIRWLECDGHIETGFRKKFLTWYSLRATPQEVRIVKVFVDTFIEDPDSLAGQLVDTFSDVISNKRSTTVPAGFCLKLWH