Information report for g19421
Gene Details
Functional Annotation
- CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G02840.2, AT5G02840.1, AT5G02840.3
- Brassica napus: BnaA10G0294200ZS, GSBRNA2T00136500001, GSBRNA2T00049249001
- Brassica oleracea: XP_013610517.1, XP_013610518.1, XP_013625291.1
- Brassica rapa: XP_009122748.1, XP_009122749.1, XP_009130739.1, Bra009562, Bra005751
Gene Resources
- Pfam: PF00249
Sequences
gDNA Sequence
- >g19421
TCGAAGAATTGTTATTATTGAGAAGAACAGAGACAAAACCTGGACGTTAACGCTTGATACAAAGAACAATACAACATAGTTATGTATCTCACTTATGAGTTAAGTAACAATTTGCTAGTGCCTTACATAGCTTTTTTAACCAATCAGAAAAAGAGGTAGAGAAACTTACATATTACAAAACGCATGAACAAATAATTATCAAAAAAGAAGATACAATTGGTAACCATTTTCTACACACACATACATATATCTACCATTCACTCGACTGGTTCTGACCGAAACTGCATATGTTCCTTTTGTTTGCGACGACGACTCAGTTATGTTCTCCTCAGACAACAACCGTAAGAAGCATCTGACACGATCACCATATACAGAGATTAGATAGCAGTTTGGTGAGACTGTAAGAGCCATAGTTTTAAAACCTTAAGGGAAGTGTAATCAGAATAATAGCAGCTAAGCTGAGATTCTAACAGTTATGATCTACAGATGAGGAACACTAGGGTGAAAACCTTAGAGAACTGTGGTGTTAGGCTTCGATATAATGTTATTAAGTCAATACGAACGTTCTTATTATACCAAAGTGATTTTATATTGGTGTTGGAGGGTGAGATATAAAACCACACTTACTTGATAGCTGGTAGACAGTTGTTGCAAGCAAGAATTCGTCAAGAAGATATATAACTTGTTGAGTGCACTAACAGCTAATAGCTCAAGTGTTCATGACCTTCCTCTGCAGCATCAACATATTCAGACTAATTTATGGTTAGATTACATTTGTTCCAAGAAATAAATCCAGAACCAACAGTTGATGTGTGAATATAAGAGATATATATCTCAAAGAGCACAACAATCTTCATTTAATCATTGGAGTGGTTAAAGAAGTAACACAAACTAAGGGCGAACTAGTCTTAAATTCTTTAGTTAAATTTCAAGGCAGATAGTCAGTAGATCTGTTAGCTGTAAGAGACTTTTTTCCACTCAGTCTTAACACGAAAAGACAAATGTGCCTCACATGCTCAACGATCACAGAGTAATGATAAAATTAACACTTACAGCAGGTTCGAAGTCAGGGTTTGACAAGTTCACTGTGAGGTTTCTCATCAACAGCAGAACCTGAAAGACAAACTGTGATTAGTGACGGATACTGGAAAAAGAACAATCACTGACAGCTACAAATAGGTACCATGACACCTAAAAACTGACCCATGGTTGTAAACCCCCATTATTGGACCAACATCTCCATAGAAACATGGTACCAAACAAATTTTGAAATGGAATCTATAGATACATCCTTTATTAAATTCAGCTGTGAGAGAAGATATAGATTCACGAGTTGGAAACACCAAAAAGCCTAAGTACGGTAGCAGAAAGGGAGCTCAAAGAAGAAGCCTCATTCAAGTAGAAGCATAAATGATGGATATGCTGCCACACACATCATTTAATCTAAAGGCAAGTAAGCTCCAACTCACAGTTTCGAAATTTATAGGATCCATTTCCTTGAGCTTTTTCATGCGGCCTTTGCTGTCAGGATCGAAGACACTCCCAATGAAGTTATAAACCTCAGCAAAATCAGGAAGACCTGCAAAGCAACCATTATAACAGTGTCCACCATAAAATGAAAACTCAGAAATAGTCCCTCAATTGTTCAGATAATTACCATGCATTGAGGGAGCTTGTTTCACCACTCTTAAACCCTTAGAATCTGATAGTGTTCTGCTTGAGCTTCCAATACCAGATGCTGAAGGACTAGTTTCACTTATCATGCCATTTGATCCAACAACAACTGAAACAATGATATTGTAAGCCGCATTTAGCATATGACACTTCAGCAGATAGAGTAACTCGAATACCAAAGCAAAACACAAAAACTGAGTACAGATGAGAACGCATGCCTTCTGCTCCACAGAGGGTATCAAGTTCAAGTTCATCTTCTGGTGGAATAACCCCACTTACGGCTATGTTTAGCAATGCAGAGGTATCATCATCCCATGAAGTATATCCAGGCAGGTTATTTATTTGAGTAGGAAAGGACATGGAAACGTGTAGCGACATTTGAGCTGCAGATTTGAGTTGAACTCAGATTGATTAAATGTTACTCCATCTGTCCACCCAAAGTAATATCTATTACAATAGAACTAACCATTCTTCGATGCCTTTTGAGGATATGGATGAGCAGCTTTGCGCTTAGGCCTAGGGGGTGGCACATGTGCTAAAGTCCCATTTTTCTGGACCTTTAGAAAGTATTTTTGGGCATGGCTCCTGATCTGCAGTAAATCAAACAGGCACAGGAAGATTGAGTGGGGAAGTGTGCCAAGGTTGTATATTAAATCAAAAAATCCAAAGAAGCTGATCTCAAACCTGAATGACTGTCTTTGAACCAACAAAATCTTCTATCTTTTTCCAGTCACGATCAAACCTAAGGACACAAGAAAATTGTCAGCAACAAAGTAAGATTCTTTTTCAGAAAAAGAGAGAGAAGCCTTTCACACACAAAAGAGCAATGTAACATTTGGAAGTAACGAACCATTACCAAAATCTGACTTGTAGTTTAGGACTTATTGGAAATTGGTTTCATGCATAGCTCAAAAAGCTGACTTGTATGAAGCTTTTTCAGTTCTCATGTTGAATATTTTCAATAAAGAAAGATACGACTTCTGAAAAATCCCACTTTTTATGCAGAAAACAGATGCCAAGTCCTCTCTATTGAATCATTTTGGCAACCTAAAATATGCTTAAGCTATACTTCGGGTTTATGAGAAAAAACATTCATCAGCTATTAATATAAACGCTGGTCTATCTAATATACAATCTAACCTAACCAATCAAAAAAGACATTGTTGCTTCTGCAGAATCCAGTTACATAGGCAAAAACTCCAGATGATCTACCACATAACCAAACTTCGATCTGATAAAAGTTTATCACTTTATCAACCCTAACATAACATTTTAACAAATGGGCCAACTTCACGGATCAAGTAGTGTAATTTATCATAGATGAAGCAAATTAAGCGAAATTACGCAAAATTCAGCTAAAATTAGAGCTTCCAGAAACACACAGAAACAGTAAACCAAATTGCTGGTAGGAGAAAGTAAAATTACAATTGAAGAGCTTCCAGAAACTTATCGTGTTCGCCTTCAGTCCAACTCTCTCTAGACTTGGTGATTGTGTAAGCTTTCCTCACCTTCTTCTCCGGTGCTTCCCCAGCTTCCGTCGTTGCCATCGTCGTCTCTGTAGCATCTGTACAATTCTCCGACGGTACTACTTCGACGACCACCGGATTGCTGGAAGTCATATCGTCTTTTTTATTCAAGATAGCGATCGTCTAGAGAGAGAGAGTGAAGAGAGAAGGGGTTAGAGAGAGAAATGACGACGATATCCACAT
CDS Sequence
- >g19421
ATGACTTCCAGCAATCCGGTGGTCGTCGAAGTAGTACCGTCGGAGAATTGTACAGATGCTACAGAGACGACGATGGCAACGACGGAAGCTGGGGAAGCACCGGAGAAGAAGGTGAGGAAAGCTTACACAATCACCAAGTCTAGAGAGAGTTGGACTGAAGGCGAACACGATAAGTTTCTGGAAGCTCTTCAATTGTTTGATCGTGACTGGAAAAAGATAGAAGATTTTGTTGGTTCAAAGACAGTCATTCAGATCAGGAGCCATGCCCAAAAATACTTTCTAAAGGTCCAGAAAAATGGGACTTTAGCACATGTGCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCGAAGAATGCTCAAATGTCGCTACACGTTTCCATGTCCTTTCCTACTCAAATAAATAACCTGCCTGGATATACTTCATGGGATGATGATACCTCTGCATTGCTAAACATAGCCGTAAGTGGGGTTATTCCACCAGAAGATGAACTTGAACTTGATACCCTCTGTGGAGCAGAAGTTGTTGTTGGATCAAATGGCATGATAAGTGAAACTAGTCCTTCAGCATCTGGTATTGGAAGCTCAAGCAGAACACTATCAGATTCTAAGGGTTTAAGAGTGGTGAAACAAGCTCCCTCAATGCATGGTCTTCCTGATTTTGCTGAGGTTTATAACTTCATTGGGAGTGTCTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATAAATTTCGAAACTGTTCTGCTGTTGATGAGAAACCTCACAGTGAACTTGTCAAACCCTGACTTCGAACCTGCTTCTGAATATGTTGATGCTGCAGAGGAAGGTCATGAACACTTGAGCTATTAG
Protein Sequence
- >g19421
MTSSNPVVVEVVPSENCTDATETTMATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPGYTSWDDDTSALLNIAVSGVIPPEDELELDTLCGAEVVVGSNGMISETSPSASGIGSSSRTLSDSKGLRVVKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEPASEYVDAAEEGHEHLSY