Information report for g16823
Gene Details
Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.
Homologous
- Brassica napus: BnaA06G0406800ZS, BnaC03G0129200ZS, BnaA02G0118200ZS, BnaC02G0145400ZS, BnaA03G0112400ZS, BnaA03G0516300ZS, BnaC07G0495000ZS
- Brassica oleracea: Bo3g019340, Bo2g032410, Bo7g114310
- Brassica rapa: Bra020445, Bra006824, Bra024097
- Glycine max: Glyma.13G097000, Glyma.17G062500
- Gossypium hirsutum: Gohir.A05G004280, Gohir.D05G005000
- Populus trichocarpa: POPTR_018G091500v3
Gene Resources
Sequences
gDNA Sequence
- >g16823
GAAATCATGCCTATTCATTTTTGAGGTTTTCACTAGACATCAGAAACAAATTGGAAATGCGTACTTGCATAATTTCACTTCAAAAATATCGTTTTGGTGTAGAATATCAAGAAAGTTAATAAATAGACCGATTTCAAAAGCTTTAATGCCAAAGCTTGAGGCAGATTCCAGCAGGTACAACGCCACTTGTTGATGATCTTTTGCTCACTATGCATTCTGAGAATGTATCCACAAGCTGTTCTCCCAAAGAAGACAGATCCTCCATAAAGGTCTCAACAAAGATCTTCACAACTCTAACTTCTCGGTGAGTAGATCTTAAGCTATACCATGTCAAGAACCTTTCCCTAAAACTCCTGTCTATATGTCCTTCTTGCTCTAAACATCTAATCGTCTTCACAATTTGACCCAAGTCTTTATCTCCTACCCCATTTGCGGCATTATTGATCTCAGGTTTCTCGTTCACCGATATTGTTCTTGATTTGAATCTTTTATTCCCTCCTTGCTTCCCCTTAGAAATATCTCTTTTGCAGGGTGTTACAAGCAAGTCTCTTCCATCTATCTTGTTAGCTTTCCTCTTTACAAGCCTCTCCTCTTCAAGCTCGGATTCTACTTCTCCTGCATTACAGTGTTCGGTGTTGTCCTTGTCACCGTTTTCTTCGCTGCAGCTCTTATGGACATTATTAGATTCATCTTCGTGCAAAGATGGATTACTACAAAGACCACTGCTTGAGTTTGTCAAAGGGCTTTGCCGGTCCCGAGCTTCATCTATATTGTCTTTCAATGTTGAGAACTGAAGCTCGGACTCATCTAAGTCACCTTCCTTGTTAAAGGACACGACTCTGAGACAGAACTCGGTGTCGGGTTCAAGTCCTTGGATGGTAGACCTTGTTTCAGGTAGATACGCAACACAGTTCACCTCAGACGAGCACTCTTCGTCCTTCGACTTCCGACAAAACAACCTGAAACCTGTGATCTGGTTTTGTGTAGAAGAAGATGGCTCCTCGGACTCTAATCTCACAGTGACTGATCTTGCTTGAATCTCTTCTACTCTCACGGTCATCTTGTCACCTAACGAGAACTAATGTAAACATCTTCGACTTTAAAACCAAAGTAATGTATGAACACACTAACCTTGTCCTGAAACAGATTCCGATGGTGAGACCACTTTGTCCAGAGCTTCCATTGCCTGAGAACACAGCTTCTGGACTTGTGATCCCGACGAAAGTCTTTTGACGATACCTCGAGCCATCTTCATTGCCCACCCCGACAACGGACCCACATCACCTTCGAGCTTCTTCACCGCCTCATCCATGAGTTCCAACAGATTCCGATACTGCCTTGTACCTCTCAACAGCTTCTGTCCTAAAGAAAGTCGGTAACAAAGTACATCCACACGCCGCGTCTCTTTCGCCACCTTCACTTGTTTCCTCCAGCATCTGTAAGAACTCGCATACAAACACACACACACATTACATTACATTATCCAAACAATCTCTTTTCATTTGTATATCCATCATAGATTTCAATATCGAAAGAACCTTACCCGAGCAAGTCATTATCTTTGCCGCAATATGCGCAATAAAACCTACCATCAAGATCATCACTCCCAATCCCATACCTATCTTGCTTCAAACCACATTCCAAATGACAAGACGATCCACAAGCCTCACAAGTAAGCCATAAACTCGGATCCTTATTATCATCAAACTTTTGACAAATGCAGCAAGAACACCTTCTGCARAAAGTATCATCGCTTCCAAGCGCAGCTCTACAAGCTAAATTCTCACAGCAAATGATGTAACCGATCATCTTCTTCTGCTTCTTCCTCGAGTTTCTACGGTCAGAATAAGAAGTCTCTCCAAGAGGACGAGACACAAGATTGAGTAGATTCTCAATGAGTTTTGGTTTGTTCAGACCAGTGTACTTCCTCTCTTTACCCATCTCAGCACATATGATCTTCATGATCTCATTTCTGCTCCATGAATTCAAAAGCTCCGAAGCTTCTTGTGGCTGGTTAGACAATGCGTGGATCAATTCTCTCCTTTCACTTACATTCAAATCGTTTGGTTTACAAGTCTCAATGCATTCATTATCTGCACCCACCATAAAAGACCAATCCTTTAACCCTAAAAATCTCCTCAAGATGAAAAAGGAGAGGATCACAATGTTCTGATTCTTTACTTTTGGGTAAAAATTATGAAAAGTTTCAAACTTTGAATGAATCTCAACAACCCAGAAGCAAAATGACGACGAATCCATTATCCAATGCGAGAAATAAACGTTTGTTCATATTGAATAAAACGGCGTCGTGTTAACGCCCTAAAACGCATGAAACTAGGAACAGTGAGAGAGACGTTCACGTCGAGAAAATATCGTACCTTGAAATGGAGAAGAATCCATGTTCTCTGGACCCACATTACCATCAAAACGCCAGATCTTTGAGAGCTGCAGAGATCCGATTTCAGACAAAATGTTTAATTATGTTAAAGTTAAAGCAAGAACCATCACAACAATCCGAGATATAGTTCAGACAATTTTTTCTCAAAACGAAAAAAAAAAAGATCAAATATGTAACAGAACTTACGATGATGAAGAACAATCAAGATCGAAAAACAAAAATCGATTTTTCTTTTAAAGTTTTAATCTTTGAACAACCCAAAGAGAACCCATGAAATACTCGGTCTTAAGAACAAAACATTGATAATTTTCAGAGAGTAAATAAATGTGTAAAATAATTAAGCGAAAAATGAGGATTGGTTGGTTGTTTACCGAATGAGAAACCTTCAAAAATAAATATAACAAAATACATAAAATAAAAACCGCTATTTACCGAAGCAGCTGGCATTTTTTTTCCTTCTTCGTGTTCTTCGTTTTTTTTTTCTCTGATTTTTTATTCTAGGTTTAGTGTAGAGATCTTTTATGGGGATTTTGTAAAAAGGAAAAGATGTTTCTCTGGTGGTTCTTCTCTCTCCTTTTTTTTTCTAGATGTTTCTATGAGGAAACCCTCTGATGGATGAATCTTCTGCTCTGAGAGCTTTTTTTTT
CDS Sequence
- >g16823
ATGGATTCTTCTCCATTTCAAGATAATGAATGCATTGAGACTTGTAAACCAAACGATTTGAATGTAAGTGAAAGGAGAGAATTGATCCACGCATTGTCTAACCAGCCACAAGAAGCTTCGGAGCTTTTGAATTCATGGAGCAGAAATGAGATCATGAAGATCATATGTGCTGAGATGGGTAAAGAGAGGAAGTACACTGGTCTGAACAAACCAAAACTCATTGAGAATCTACTCAATCTTGTGTCTCGTCCTCTTGGAGAGACTTCTTATTCTGACCGTAGAAACTCGAGGAAGAAGCAGAAGAAGATGATCGGTTACATCATTTGCTGTGAGAATTTAGCTTGTAGAGCTGCGCTTGGAAGCGATGATACTTTYTGCAGAAGGTGTTCTTGCTGCATTTGTCAAAAGTTTGATGATAATAAGGATCCGAGTTTATGGCTTACTTGTGAGGCTTGTGGATCGTCTTGTCATTTGGAATGTGGTTTGAAGCAAGATAGGTATGGGATTGGGAGTGATGATCTTGATGGTAGGTTTTATTGCGCATATTGCGGCAAAGATAATGACTTGCTCGGATGCTGGAGGAAACAAGTGAAGGTGGCGAAAGAGACGCGGCGTGTGGATGTACTTTGTTACCGACTTTCTTTAGGACAGAAGCTGTTGAGAGGTACAAGGCAGTATCGGAATCTGTTGGAACTCATGGATGAGGCGGTGAAGAAGCTCGAAGGTGATGTGGGTCCGTTGTCGGGGTGGGCAATGAAGATGGCTCGAGGTATCGTCAAAAGACTTTCGTCGGGATCACAAGTCCAGAAGCTGTGTTCTCAGGCAATGGAAGCTCTGGACAAAGTGGTCTCACCATCGGAATCTGTTTCAGGACAAGGTGACAAGATGACCGTGAGAGTAGAAGAGATTCAAGCAAGATCAGTCACTGTGAGATTAGAGTCCGAGGAGCCATCTTCTTCTACACAAAACCAGATCACAGGTTTCAGGTTGTTTTGTCGGAAGTCGAAGGACGAAGAGTGCTCGTCTGAGGTGAACTGTGTTGCGTATCTACCTGAAACAAGGTCTACCATCCAAGGACTTGAACCCGACACCGAGTTCTGTCTCAGAGTCGTGTCCTTTAACAAGGAAGGTGACTTAGATGAGTCCGAGCTTCAGTTCTCAACATTGAAAGACAATATAGATGAAGCTCGGGACCGGCAAAGCCCTTTGACAAACTCAAGCAGTGGTCTTTGTAGTAATCCATCTTTGCACGAAGATGAATCTAATAATGTCCATAAGAGCTGCAGCGAAGAAAACGGTGACAAGGACAACACCGAACACTGTAATGCAGGAGAAGTAGAATCCGAGCTTGAAGAGGAGAGGCTTGTAAAGAGGAAAGCTAACAAGATAGATGGAAGAGACTTGCTTGTAACACCCTGCAAAAGAGATATTTCTAAGGGGAAGCAAGGAGGGAATAAAAGATTCAAATCAAGAACAATATCGGTGAACGAGAAACCTGAGATCAATAATGCCGCAAATGGGGTAGGAGATAAAGACTTGGGTCAAATTGTGAAGACGATTAGATGTTTAGAGCAAGAAGGACATATAGACAGGAGTTTTAGGGAAAGGTTCTTGACATGGTATAGCTTAAGATCTACTCACCGAGAAGTTAGAGTTGTGAAGATCTTTGTTGAGACCTTTATGGAGGATCTGTCTTCTTTGGGAGAACAGCTTGTGGATACATTCTCAGAATGCATAGTGAGCAAAAGATCATCAACAAGTGGCGTTGTACCTGCTGGAATCTGCCTCAAGCTTTGGCATTAA
Protein Sequence
- >g16823
MDSSPFQDNECIETCKPNDLNVSERRELIHALSNQPQEASELLNSWSRNEIMKIICAEMGKERKYTGLNKPKLIENLLNLVSRPLGETSYSDRRNSRKKQKKMIGYIICCENLACRAALGSDDTFCRRCSCCICQKFDDNKDPSLWLTCEACGSSCHLECGLKQDRYGIGSDDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSLGQKLLRGTRQYRNLLELMDEAVKKLEGDVGPLSGWAMKMARGIVKRLSSGSQVQKLCSQAMEALDKVVSPSESVSGQGDKMTVRVEEIQARSVTVRLESEEPSSSTQNQITGFRLFCRKSKDEECSSEVNCVAYLPETRSTIQGLEPDTEFCLRVVSFNKEGDLDESELQFSTLKDNIDEARDRQSPLTNSSSGLCSNPSLHEDESNNVHKSCSEENGDKDNTEHCNAGEVESELEEERLVKRKANKIDGRDLLVTPCKRDISKGKQGGNKRFKSRTISVNEKPEINNAANGVGDKDLGQIVKTIRCLEQEGHIDRSFRERFLTWYSLRSTHREVRVVKIFVETFMEDLSSLGEQLVDTFSECIVSKRSSTSGVVPAGICLKLWH