Information report for g08444
Gene Details
Functional Annotation
- Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.
Homologous
- Brassica napus: BnaC03G0164100ZS, BnaC09G0329300ZS, BnaA03G0141500ZS, BnaA10G0083600ZS, BnaC05G0276900ZS
- Brassica oleracea: Bo9g098970, Bo5g068210
- Brassica rapa: Bra029192, Bra035723, Bra023207
- Cucumis sativus: CsGy4G018330
- Prunus avium: Pav_sc0000622.1_g480.1.mk
- Prunus persica: PRUPE_4G232500
- Rosa chinensis: RchiOBHm_Chr5g0042571
Gene Resources
- Pfam: PF07899
Sequences
gDNA Sequence
- >g08444
AAAAACAAAAAGCTTTGTTACAAATTTACATTCCTCCTATTTGGGGTCCAGTGATGAGTTACTACGAGGAGACCTGTGATTGGATAAACCCAAATATCTTTCTTCAGATGGTGAATGTCTGTAAACTCTTTGTAGACCAAATGGTATTTGTTGTTGTCCATGAACTGGAGGAGAGTACTGTCGTGGATGTCTCTGTCCGTGAACCGGAGACGGAGAGTACTGTCGAGGAAGTTTCTGTCCGTGACCCGGAGAGTATGAATTTGGAGGTAGATGTTCATATGCATATACGCTTCTTCCTAACCCACCAGGTGGAAGTGGAACCATATATTCAGGGGATCTCCTGAGACTTGAGCGATGAGGAAAAGATGATGACGGGCCGAGGTAACTATTCACAAGAGCTGATATTTCATCTGTATCGTCGTCTCTTTGACTAGGAAAGCTTCGATCAAGGTAGATAGGAGAATATGATGACGAAGCTACTGGTGGCATCTCCATGGGTGACAACCTTGGACGTTTCATCTGTTGGTTATACATTCTCTTGGCGAGTACCGCTTCCTCCATTAAACTGATGGATCTTGCTTTCTCTTCCATCCCTTTGTCAAGCTGAAGAGTGTCTTTCTCCAAATTAACAATTTGCTCTTTGATCTGCCACCCTGGTAGTTCTTTCGCAGGATCTAACTTGTGAGTCTCCATACACTGCATCACTGATGATAACGCAGCTAGCTGCTTTGCAGTCGCCTCTTTCTGTTGAGAAATAAAGATATCAATGGTCAGATTCAGATGAGAATAAAGAGTTCATAATGTACAAGGGATGGGTTCATCATACAAATGCCAGCGGTGACTGGGCTTTCCGTTTTTCCCTCTCAAATGACTCCTTGCTCATCCTTAAGAATGAAGTTAGAACAGAAGAAGCTGAAAACTTATCCTCCATCCCAAAGGTATAAACCATCTCAAGAGCTTCAATATGCATTCCACGCTTGATACTTGATTCAACTATACCTATGACCAATAGAATATTGTGTAAGTACCAGTTATTAACCCTTTAAGCTGGCATTGGTTCAGGCCGAATTAGTATCGAACAATGAAGTCGTATGATTTTAACTTGAAATATTGAAATCCACAGCAAACACTATTTCCAAGGTAATAGCATGTCGTTTAGTTCTGACAAACAACAATTTTGTACCAAAAGCAATGGTTGAGAGTTCCAAATTCTTTGCAGAATAGATTTCAGCTAGGATTTGGCTCAATCAGTCATTGCACTCTAAAATGCCATGTGCTCTCCTAGTTTATTGCATGGTACTACATACAATTCTACTCCAAAGCTTACAGAAAACACATATAGAACTCGATACTTATTGAATTTGCAAAAAAGGAAGCACCTTTGCAATGAAATTCATTGAGTGAAAACAGAACATGGTACCTGGAATCATAGGGACAAGAAAGGGTGACCGCTTCAAAGCACCCGCAATCTCATTCGAACCACTCATCCGTATCAAATCCAACAAATCCATACTCCTTAAGTTTGAAGGAACCCCAAAACAAGCAACTAGTAAAAGCAAACCCCTTGCATCCATTTTCTCTGCCGCAGCTAATCCTCCTTCGCTCATCAGTCTTTTCCTCCACGCAACAGCAGCCGCCTCCGCCTCATCCTTTATACAACTCTCAATCTTGACCTTCCCTTTACCACGATCAGGCATTAGAAGAAAAGACTCCAAAATAAGAAGCGAAACCTGTCTCGCAGAGACCATAGGCGACTCTTTCGTAAATGCTCTACGCCCTTGTAAGTAAAACTTCCCAATACATTCCAACACAAACTTCGCTGGCTCCTTAGCCAATTTCAAAGCTGAAGGAATCTCTTCCATTAGCTTAGCTCTATCAGAGATATTCGCGTATATGTATTTACGCAGACCTTTGCTACACATCAACTCACACAACCGTTCCCCCTCCGCTTTATTCGACGTCTCCGGTACAATCTCCGCAGGCTCCTGAGACGATTGGCTCACACTCACGGTGGTCTCTACAGAAGCATTGTTCCGCGGAGGCGATAACAACGGCTGATGGAAATTGGAAGAAGCGGCGAGGTCGGCGCCGTTACTCTTGAGTTTGGAATCAATTGCGTTTTCGATTGACTCGATATGCTTCTGAAGATCATCGAATTGGCGTTTGAATGCTTCCACTGCAACTGAAAACGCAGCCAATTCGTCTATGGATTTCAAAAATTGAGGCTGCTTAGATTGACCGATCGAAATTTCCATAGCTGTAGACTCTGTTTCGACAACCGCCGGTAATTCTCCACGTCGTCGTTCAGATTGGTGTCGCTGGTGCAGCAGTGGAATCGCCGCCGTTGAGGATTGCGCCGCCACCGTTGGTGGATAATTGGCCATGAGAATGCGGAGAAGAAGAAAGATTGCAGAAAATTAAATAAAAGCCCTAATTTCGACTTTCCTAAAAATCGTTACTTAAAACTCTTAAATTCTATGAAAATT
CDS Sequence
- >g08444
ATGGCCAATTATCCACCAACGGTGGCGGCGCAATCCTCAACGGCGGCGATTCCACTGCTGCACCAGCGACACCAATCTGAACGACGACGTGGAGAATTACCGGCGGTTGTCGAAACAGAGTCTACAGCTATGGAAATTTCGATCGGTCAATCTAAGCAGCCTCAATTTTTGAAATCCATAGACGAATTGGCTGCGTTTTCAGTTGCAGTGGAAGCATTCAAACGCCAATTCGATGATCTTCAGAAGCATATCGAGTCAATCGAAAACGCAATTGATTCCAAACTCAAGAGTAACGGCGCCGACCTCGCCGCTTCTTCCAATTTCCATCAGCCGTTGTTATCGCCTCCGCGGAACAATGCTTCTGTAGAGACCACCGTGAGTGTGAGCCAATCGTCTCAGGAGCCTGCGGAGATTGTACCGGAGACGTCGAATAAAGCGGAGGGGGAACGGTTGTGTGAGTTGATGTGTAGCAAAGGTCTGCGTAAATACATATACGCGAATATCTCTGATAGAGCTAAGCTAATGGAAGAGATTCCTTCAGCTTTGAAATTGGCTAAGGAGCCAGCGAAGTTTGTGTTGGAATGTATTGGGAAGTTTTACTTACAAGGGCGTAGAGCATTTACGAAAGAGTCGCCTATGGTCTCTGCGAGACAGGTTTCGCTTCTTATTTTGGAGTCTTTTCTTCTAATGCCTGATCGTGGTAAAGGGAAGGTCAAGATTGAGAGTTGTATAAAGGATGAGGCGGAGGCGGCTGCTGTTGCGTGGAGGAAAAGACTGATGAGCGAAGGAGGATTAGCTGCGGCAGAGAAAATGGATGCAAGGGGTTTGCTTTTACTAGTTGCTTGTTTTGGGGTTCCTTCAAACTTAAGGAGTATGGATTTGTTGGATTTGATACGGATGAGTGGTTCGAATGAGATTGCGGGTGCTTTGAAGCGGTCACCCTTTCTTGTCCCTATGATTCCAGGTATAGTTGAATCAAGTATCAAGCGTGGAATGCATATTGAAGCTCTTGAGATGGTTTATACCTTTGGGATGGAGGATAAGTTTTCAGCTTCTTCTGTTCTAACTTCATTCTTAAGGATGAGCAAGGAGTCATTTGAGAGGGAAAAACGGAAAGCCCAGTCACCGCTGGCATTTAAAGAGGCGACTGCAAAGCAGCTAGCTGCGTTATCATCAGTGATGCAGTGTATGGAGACTCACAAGTTAGATCCTGCGAAAGAACTACCAGGGTGGCAGATCAAAGAGCAAATTGTTAATTTGGAGAAAGACACTCTTCAGCTTGACAAAGGGATGGAAGAGAAAGCAAGATCCATCAGTTTAATGGAGGAAGCGGTACTCGCCAAGAGAATGTATAACCAACAGATGAAACGTCCAAGGTTGTCACCCATGGAGATGCCACCAGTAGCTTCGTCATCATATTCTCCTATCTACCTTGATCGAAGCTTTCCTAGTCAAAGAGACGACGATACAGATGAAATATCAGCTCTTGTGAATAGTTACCTCGGCCCGTCATCATCTTTTCCTCATCGCTCAAGTCTCAGGAGATCCCCTGAATATATGGTTCCACTTCCACCTGGTGGGTTAGGAAGAAGCGTATATGCATATGAACATCTACCTCCAAATTCATACTCTCCGGGTCACGGACAGAAACTTCCTCGACAGTACTCTCCGTCTCCGGTTCACGGACAGAGACATCCACGACAGTACTCTCCTCCAGTTCATGGACAACAACAAATACCATTTGGTCTACAAAGAGTTTACAGACATTCACCATCTGAAGAAAGATATTTGGGTTTATCCAATCACAGGTCTCCTCGTAGTAACTCATCACTGGACCCCAAATAG
Protein Sequence
- >g08444
MANYPPTVAAQSSTAAIPLLHQRHQSERRRGELPAVVETESTAMEISIGQSKQPQFLKSIDELAAFSVAVEAFKRQFDDLQKHIESIENAIDSKLKSNGADLAASSNFHQPLLSPPRNNASVETTVSVSQSSQEPAEIVPETSNKAEGERLCELMCSKGLRKYIYANISDRAKLMEEIPSALKLAKEPAKFVLECIGKFYLQGRRAFTKESPMVSARQVSLLILESFLLMPDRGKGKVKIESCIKDEAEAAAVAWRKRLMSEGGLAAAEKMDARGLLLLVACFGVPSNLRSMDLLDLIRMSGSNEIAGALKRSPFLVPMIPGIVESSIKRGMHIEALEMVYTFGMEDKFSASSVLTSFLRMSKESFEREKRKAQSPLAFKEATAKQLAALSSVMQCMETHKLDPAKELPGWQIKEQIVNLEKDTLQLDKGMEEKARSISLMEEAVLAKRMYNQQMKRPRLSPMEMPPVASSSYSPIYLDRSFPSQRDDDTDEISALVNSYLGPSSSFPHRSSLRRSPEYMVPLPPGGLGRSVYAYEHLPPNSYSPGHGQKLPRQYSPSPVHGQRHPRQYSPPVHGQQQIPFGLQRVYRHSPSEERYLGLSNHRSPRSNSSLDPK