Information report for Bra035723
Gene Details
Functional Annotation
- Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.
Homologous
- Brassica napus: BnaC09G0329300ZS, BnaA10G0083600ZS, BnaC03G0164100ZS, BnaA03G0141500ZS, BnaC05G0276900ZS, BnaA09G0397400ZS
- Brassica oleracea: Bo9g098970, Bo5g068210
- Cucumis sativus: CsGy4G018330
- Prunus avium: Pav_sc0000622.1_g480.1.mk
- Prunus persica: PRUPE_4G232500
- Rosa chinensis: RchiOBHm_Chr5g0042571
Gene Resources
- Pfam: PF07899
- UniProt: G3JVY1
- EMBL: JN015482
- AlphaFoldDB: G3JVY1
- OMA: ADFLDQW
- InterPro: IPR012474
- PANTHER: PTHR31791 , PTHR31791:SF49
- SMR: G3JVY1
- eggNOG: ENOG502QUHP
- STRING: 51351.G3JVY1
- HOGENOM: CLU_064590_0_0_1
Sequences
gDNA Sequence
- >Bra035723
TAATGTGTAAAGAAGGGACATGCAAATGCTATCGGTGCTTGAGCTTTCTGTTTTGCCCTCTCAAATGACTCCTTGCTCATCCTTAGGAATGAAGTTAGAAGCGAAGAAGCCGAAAACCTATCCTCTATCCCAAAGGTATAAATCATACCAAGAGCTTCAATATGCTTTCCACGCTTGATACTTGAATCAACTATACCTACAACCAATAGAATATTGTGTTAGGACCAGTTACTAAACCCTTTCATCGAACATTACTCAATGCAACAGAAGAGTCATATGATCTACTTCCAAGGCAATTGCACTCTAAAATACTCTTAAGCTCTTATAAGGAAGCAAAAATAAAGATGGGAACTGAATCCTGACCCATTCTGCCACAAAAGAAACTCCACTCATCGACTCAAGAAAAAAGATGATACCTGACATCATAGGGACAAGGAAAGGTGACCGTTTAAGAGCAGCAGCAATCTCAGCAGCACCACTCTTCCGTACCAGATCAAACAAATCCATACTCGAAAAGCTGGAAGGAATCCCAAAACAAGCAATTAGCAGAAGCAAACCCCTAGCGTCCATTGCCTCTGCCGCAGCTAACCTTCCTTCGCTCATCATCCTTTTCTTCCACGCAACAGCAGCCGCCTCGGCTTGATCCTTGATAGAAACTCTATCAAAGGGCTTCTTCGGATCAAGCATTAGAAGATAAGACTCCAGGATCAGAAGCGAAACCTGCCTCGCAGGGATCATATGGGAATCACTCGCATAAGCTTTGCGCCCTTGTAAGTAAAACTTGCCAATGCATTCCAACACGAAGTTAGCAGGCTCCTTGGCTAGCTTCAGAGCTGCAGGAAGCTCTTCAATCAGCTTAGCTCGGTCAGAGATATTCGAGTACATGTATCTACGCAGGCCTTTGCTGCACATCAACTCGCACAATCGCTCCACCTTCTCCGCTACTGTCTCACAAGTCTCCTTTGGCGGCGATTGTGTGGCAGCAACCGTTTCTCCGGAAGCATCGTTTCGTGGAGACTGCGATCGGGAGGAGGGAGACTCGGCGGTGATGCCTTTGCTCTTGAGACTGGAGTCAATGGCGTTCTTGATGTAATCCATGTGGCTTTGCAAGTCGTCGTAGTGGCGTTTGAAGGCGTCCACTGCAGCTGAAAACGCAGTTAAATCGTCGATCGATTTCAAAAATTGAGGATGGTTAGATTGTTCGATCGTGATTTCCGTGTTTGTAGGCACGGTTCCCCGTTGTATGGTCGGCGATGATGATTGATTTTCCCTCGTGGATGGATCATGGGCAGGGATCAGAGAACCATTACGAAAGGCCAT
CDS Sequence
- >Bra035723
ATGGCCTTTCGTAATGGTTCTCTGATCCCTGCCCATGATCCATCCACGAGGGAAAATCAATCATCATCGCCGACCATACAACGGGGAACCGTGCCTACAAACACGGAAATCACGATCGAACAATCTAACCATCCTCAATTTTTGAAATCGATCGACGATTTAACTGCGTTTTCAGCTGCAGTGGACGCCTTCAAACGCCACTACGACGACTTGCAAAGCCACATGGATTACATCAAGAACGCCATTGACTCCAGTCTCAAGAGCAAAGGCATCACCGCCGAGTCTCCCTCCTCCCGATCGCAGTCTCCACGAAACGATGCTTCCGGAGAAACGGTTGCTGCCACACAATCGCCGCCAAAGGAGACTTGTGAGACAGTAGCGGAGAAGGTGGAGCGATTGTGCGAGTTGATGTGCAGCAAAGGCCTGCGTAGATACATGTACTCGAATATCTCTGACCGAGCTAAGCTGATTGAAGAGCTTCCTGCAGCTCTGAAGCTAGCCAAGGAGCCTGCTAACTTCGTGTTGGAATGCATTGGCAAGTTTTACTTACAAGGGCGCAAAGCTTATGCGAGTGATTCCCATATGATCCCTGCGAGGCAGGTTTCGCTTCTGATCCTGGAGTCTTATCTTCTAATGCTTGATCCGAAGAAGCCCTTTGATAGAGTTTCTATCAAGGATCAAGCCGAGGCGGCTGCTGTTGCGTGGAAGAAAAGGATGATGAGCGAAGGAAGGTTAGCTGCGGCAGAGGCAATGGACGCTAGGGGTTTGCTTCTGCTAATTGCTTGTTTTGGGATTCCTTCCAGCTTTTCGAGTATGGATTTGTTTGATCTGGTACGGAAGAGTGGTGCTGCTGAGATTGCTGCTGCTCTTAAACGGTCACCTTTCCTTGTCCCTATGATGTCAGGTATAGTTGATTCAAGTATCAAGCGTGGAAAGCATATTGAAGCTCTTGGTATGATTTATACCTTTGGGATAGAGGATAGGTTTTCGGCTTCTTCGCTTCTAACTTCATTCCTAAGGATGAGCAAGGAGTCATTTGAGAGGGCAAAACAGAAAGCTCAAGCACCGATAGCATTTGCATGTCCCTTCTTTACACATTAG
Protein Sequence
- >Bra035723
MAFRNGSLIPAHDPSTRENQSSSPTIQRGTVPTNTEITIEQSNHPQFLKSIDDLTAFSAAVDAFKRHYDDLQSHMDYIKNAIDSSLKSKGITAESPSSRSQSPRNDASGETVAATQSPPKETCETVAEKVERLCELMCSKGLRRYMYSNISDRAKLIEELPAALKLAKEPANFVLECIGKFYLQGRKAYASDSHMIPARQVSLLILESYLLMLDPKKPFDRVSIKDQAEAAAVAWKKRMMSEGRLAAAEAMDARGLLLLIACFGIPSSFSSMDLFDLVRKSGAAEIAAALKRSPFLVPMMSGIVDSSIKRGKHIEALGMIYTFGIEDRFSASSLLTSFLRMSKESFERAKQKAQAPIAFACPFFTH