Information report for fgenesh2_kg.3__2654__AT3G24440.1
Gene Details
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Functional Annotation
- Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM.;Encodes a vernalisation insensitive 2‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Arabidopsis thaliana: AT3G24440
- Brassica napus: BnaC07G0103400ZS, BnaA07G0068400ZS
- Brassica oleracea: Bo7g033120
- Brassica rapa: Bra015039
- Gossypium hirsutum: Gohir.D05G023000, Gohir.A05G021500
- Juglans regia: Jr10_21410, Jr10_21400
- Manihot esculenta: MANES_03G068900, MANES_16G070600
- Populus trichocarpa: POPTR_018G076500v3
- Prunus avium: Pav_sc0000212.1_g140.1.mk
- Rosa chinensis: RchiOBHm_Chr2g0091001
Gene Resources
- Pfam: PF00041 PF07227
- UniProt: D7L530
- RefSeq: XP_002885646.1
- EMBL: GL348715
- AlphaFoldDB: D7L530
- InterPro: IPR003961 , IPR013783 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF1
- SUPFAM: SSF49265
- PROSITE: PS50853
- Gene3D: 2.60.40.10
- OrthoDB: D7L530
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QSVB
- STRING: 81972.D7L530
- HOGENOM: CLU_016873_1_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.3__2654__AT3G24440.1
TCAAATCCTAAATCTAAAACCCAATCCAAATAGATTGCAATGTGGTCAATCCTGTGGTCCAAATTGATTATAAATATCCGAATCCACGTTAGAGAAATCATGGACTATTTTGTTCTAATCATATTATTCGTACTAAGAAAGAATGTTGGTTGAATAAAGAAGCTGATTAGTGTGAGACTATTACTCCATTGTTTGGCCTTTTGGTGGAGACAACATCAGCGAATGCATCGAGAAGCTGGCCAGCAAGGCTACTTGGATCATCCTCTAGAGTCTGCACAAATGTGCTCACAACGGATTGCTCCTGAGCGGTTGACCTCATGCTGAACCATGTCAAGAACCTGACCCTGAATGTTTTGTCAATGTGGCCTTCACGCTCCAGCCACCTGATTACCTTCACACATTTCTCCAGAGTGTCATCAATCGGCGAACTGTCACACTCATGGTTCTCTGAGTCATTACTGTTTGAAATTGCTTTCCTCTTCCTGGTCATGAGGAAATCAAATTCAGTATCATCACCGCTTCCATCTGATATAACCAAGCAGTCATTGTTGTTCTTCCGACTACCGTTAGACACATCATCATCATAGTTATCATGCTCATCACCATCAGCCTCAGCAAGCGAATTTAACGGCACTCCATTGTCTTCACCTCCAGAAGAATCAGGTAGAGGAGTGAACTCCTCATTCAAGTCTGGCACCGAAACTACATTTAGATCAAACTCATGCGGCCGTCGAGATGGCAATTCTTCCTCTGGCGGCTCACAACTTTTCTCAGTATCTACATTGTAAAACGCTTCAAGCAAGCCTTCCTCCTGAGCTTCAGCCAACTGCACATACTTCCCAAGTTGCCCAATTTGGAATCTTGAAGAAATGCTACTTTTCTCCTCTCTATCTGAAGGCTGACCATTACCTACTAAATCAATTATTCTCTTTTCCTTACCATCCACTGGTTTCAATATCTCAACGCTCTTCGTAAAGCACATAGCGTTCGAATGGCCAAATATACCAGCTTCTGTGTAAGAGACAACACGGAATGTGTACTCTGTGCAAGGCTCAAGGTCAGATATCACCATCCTCCTCTCAGTTCTACTGCAATCAACAAATAAATCATCCTCAGGCGTCTCTCCTTTCTTGAAATACCATAACTTGTAACCCTTAACATCATACTCTACAGCACTAGGTAGCTCAATCAGACGAAGAGTCACTTGTTTTGGTGCAATATCTTCGAAATGAAACCTACACGCAGCAGGAACTAAATCTGCAAAACATATACAAGAACTTATTTCATTACTCTCTCTTTCAGATTCATTGCAATAAACATATCTCTAATACTAACCTCTGGCTGCATTGGCTGAAACCTCCTCTGCCTTCTTTATTGCAGAAGTGCAGAGCTCTTGCACATCAGCTGCAACAGGAAGCCGACTAACAATGCCCCTATCAGTTCTAGCCGTAGGTCCATCAAGAGGCCCAACTTCATCTTCCAGCTTAGACTTAGCAGCTCTAACAATCTCATGCAATTCACTAAACCGACTAGTCCCATTGAGCAGTCTATAACTCAAATCTATCCTATAACACAGTACATCACGCCGACGTGCTTCCTTCGCTGCCACAAGCTGCTTCTTCCAACATCTTCATAAACACACACAATAGGTTATACAAAGGCACAACAACATATGCAAATAGATCAGAACTGCGACATCTAACTATGTATCCTCAAAGAAAGAAACTTTACCCAAGAATTTGAGAAACTTTGCCACAAGAGTAACAACAAAAACAACCATCAAGCTTCATCAGATCCCCAAGACCAACAACACCAACTTTGTTTTCACGAAACGCACACTCAATGTGACACGATAAGCTACAGAACTCAACATCATCTGATTTCTCAGGATCACAAACTAACCAAAGACTAGGGTCTTTGTTTTCATCGAAACCATGGCAAACACAACAAGAACATCTCTTGCAAAAGGAATCATCTTTAGGTACATTAGCTCTACAAGATGCATTCTTGCAGATCCATGATGATCTCAAACCTCCACCATCGTCTTCTTGTTGTTTCTTGTTAGATTGTTGTTTCCCATTTGAATCATGCTTCTTGTTTGACTTGTTGTTCGTCTTGCGTGATTGAGAGATCTTCGATTTCGTCGATGATGAATCCAT
CDS Sequence
- >fgenesh2_kg.3__2654__AT3G24440.1
ATGGATTCATCATCGACGAAATCGAAGATCTCTCAATCACGCAAGACGAACAACAAGTCAAACAAGAAGCATGATTCAAATGGGAAACAACAATCTAACAAGAAACAACAAGAAGACGATGGTGGAGGTTTGAGATCATCATGGATCTGCAAGAATGCATCTTGTAGAGCTAATGTACCTAAAGATGATTCCTTTTGCAAGAGATGTTCTTGTTGTGTTTGCCATGGTTTCGATGAAAACAAAGACCCTAGTCTTTGGTTAGTTTGTGATCCTGAGAAATCAGATGATGTTGAGTTCTGTAGCTTATCGTGTCACATTGAGTGTGCGTTTCGTGAAAACAAAGTTGGTGTTGTTGGTCTTGGGGATCTGATGAAGCTTGATGGTTGTTTTTGTTGTTACTCTTGTGGCAAAGTTTCTCAAATTCTTGGATGTTGGAAGAAGCAGCTTGTGGCAGCGAAGGAAGCACGTCGGCGTGATGTACTGTGTTATAGGATAGATTTGAGTTATAGACTGCTCAATGGGACTAGTCGGTTTAGTGAATTGCATGAGATTGTTAGAGCTGCTAAGTCTAAGCTGGAAGATGAAGTTGGGCCTCTTGATGGACCTACGGCTAGAACTGATAGGGGCATTGTTAGTCGGCTTCCTGTTGCAGCTGATGTGCAAGAGCTCTGCACTTCTGCAATAAAGAAGGCAGAGGAGGTTTCAGCCAATGCAGCCAGAGATTTAGTTCCTGCTGCGTGTAGGTTTCATTTCGAAGATATTGCACCAAAACAAGTGACTCTTCGTCTGATTGAGCTACCTAGTGCTGTAGAGTATGATGTTAAGGGTTACAAGTTATGGTATTTCAAGAAAGGAGAGACGCCTGAGGATGATTTATTTGTTGATTGCAGTAGAACTGAGAGGAGGATGGTGATATCTGACCTTGAGCCTTGCACAGAGTACACATTCCGTGTTGTCTCTTACACAGAAGCTGGTATATTTGGCCATTCGAACGCTATGTGCTTTACGAAGAGCGTTGAGATATTGAAACCAGTGGATGGTAAGGAAAAGAGAATAATTGATTTAGTAGGTAATGGTCAGCCTTCAGATAGAGAGGAGAAAAGTAGCATTTCTTCAAGATTCCAAATTGGGCAACTTGGGAAGTATGTGCAGTTGGCTGAAGCTCAGGAGGAAGGCTTGCTTGAAGCGTTTTACAATGTAGATACTGAGAAAAGTTGTGAGCCGCCAGAGGAAGAATTGCCATCTCGACGGCCGCATGAGTTTGATCTAAATGTAGTTTCGGTGCCAGACTTGAATGAGGAGTTCACTCCTCTACCTGATTCTTCTGGAGGTGAAGACAATGGAGTGCCGTTAAATTCGCTTGCTGAGGCTGATGGTGATGAGCATGATAACTATGATGATGATGTGTCTAACGGTAGTCGGAAGAACAACAATGACTGCTTGGTTATATCAGATGGAAGCGGTGATGATACTGAATTTGATTTCCTCATGACCAGGAAGAGGAAAGCAATTTCAAACAGTAATGACTCAGAGAACCATGAGTGTGACAGTTCGCCGATTGATGACACTCTGGAGAAATGTGTGAAGGTAATCAGGTGGCTGGAGCGTGAAGGCCACATTGACAAAACATTCAGGGTCAGGTTCTTGACATGGTTCAGCATGAGGTCAACCGCTCAGGAGCAATCCGTTGTGAGCACATTTGTGCAGACTCTAGAGGATGATCCAAGTAGCCTTGCTGGCCAGCTTCTCGATGCATTCGCTGATGTTGTCTCCACCAAAAGGCCAAACAATGGAGTAATAGTCTCACACTAA
Protein Sequence
- >fgenesh2_kg.3__2654__AT3G24440.1
MDSSSTKSKISQSRKTNNKSNKKHDSNGKQQSNKKQQEDDGGGLRSSWICKNASCRANVPKDDSFCKRCSCCVCHGFDENKDPSLWLVCDPEKSDDVEFCSLSCHIECAFRENKVGVVGLGDLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARRRDVLCYRIDLSYRLLNGTSRFSELHEIVRAAKSKLEDEVGPLDGPTARTDRGIVSRLPVAADVQELCTSAIKKAEEVSANAARDLVPAACRFHFEDIAPKQVTLRLIELPSAVEYDVKGYKLWYFKKGETPEDDLFVDCSRTERRMVISDLEPCTEYTFRVVSYTEAGIFGHSNAMCFTKSVEILKPVDGKEKRIIDLVGNGQPSDREEKSSISSRFQIGQLGKYVQLAEAQEEGLLEAFYNVDTEKSCEPPEEELPSRRPHEFDLNVVSVPDLNEEFTPLPDSSGGEDNGVPLNSLAEADGDEHDNYDDDVSNGSRKNNNDCLVISDGSGDDTEFDFLMTRKRKAISNSNDSENHECDSSPIDDTLEKCVKVIRWLEREGHIDKTFRVRFLTWFSMRSTAQEQSVVSTFVQTLEDDPSSLAGQLLDAFADVVSTKRPNNGVIVSH