Information report for fgenesh2_kg.2__1221__AT1G69570.1
Gene Details
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Functional Annotation
- CDF5 is a circadian regulated transcript that is antiphasic with respect to its natural antisense transcript (NAT) FLORE (AT1G69572).CDF5 transcript accumulation delays flowering. CDF5 links circadian oscillation and photoperiodism.
Homologous
- Arabidopsis thaliana: AT1G69570.1
- Brassica napus: GSBRNA2T00067590001, BnaC06G0306600ZS, GSBRNA2T00124299001, BnaC06G0360900ZS
- Brassica oleracea: XP_013588706.1, Bo6g095390, XP_013588756.1
- Brassica rapa: XP_009104997.1, Bra003994
- Raphanus raphanistrum: RrC6041_p2
Gene Resources
- Pfam: PF02701
- UniProt: D7KXG9
- RefSeq: XP_002888724.1
- EMBL: GL348714
- AlphaFoldDB: D7KXG9
- InterPro: IPR003851 , IPR045174
- PANTHER: PTHR31089 , PTHR31089:SF78
- PROSITE: PS01361 , PS50884
- eggNOG: ENOG502QSI8
- STRING: 81972.D7KXG9
- HOGENOM: CLU_030533_1_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.2__1221__AT1G69570.1
AAGATAGATCACGTAGATATTATTAATCTAAAGGTTTATATATTTTGCAACTTCATCGCACAATGGAGAGAAATATCTACACCTCCAAAAATATTTCTGTTTGTGTACAAACAGTAAATACTATATCTACTCTTACTTCGAAACAACAAAATATCTACACGGACTTTTCTTCTTCCACAAGGTAACAATTAGCTAAACTCAAATCTCTCAGTTCATGAATATATATATATCTATATCAGTGTCTGATTATTGTTGCATGCTCTCCCTGAAGTTCATAGCTCTAGACATCGCTGCAGGGTTTGCTTGTAGACTGTGAGAAGTTTCAGTGACCAAGCTGCTTCTGTTGCTGTTACCCTTTGTGTCAAATCCATTGAACAAACTGAATCCTTGCGTTTTTTTCTCGGGTTTTGTCGGTAACTTAGACCACACCGCGCTCTTAGTAGCTTCGCTATTCATTTTAAGAGGTTCTGAAACCAATCTTGCTCTTGTAGTAGTTATTGTTGTATTAGTATCATTGATTCTTCCTTCAGTTTGATCTCTTGACCGTTTTCCTAAACACGGTGATGTCTCTGAGGTAGGGTATATCGGAACCGTGCATCCCCAATAAAAGGGGACAGGGTAGAAACTAGCATTAGGACCCGTTGGACTCCATTGGTAAGGCCAAGGAGAAGAATTATTAGGTAACATTACTTGCGGAGGAAGAAACCCTTGGTAGGTTTTGTGTTCTTGGGAAACTGAATCAGCGCTTATTTTTGTTGTATCTCTTGATTGATGCTTACCAGCCTCTGTCACCGAAGATTCCGAAGAACCGAAGCTAAGGATCGTCCCGGAGTTATTATTATCACAATCCTCAGAAGTGACTTGCAAGTAATGGTTTGAAGAAGCCCAGCCTTTGTTCTTGCGACGACCTGAGCCAACGGGAACGTTCCTCATGGAACCACCAGCTGTCCAATACCTCTGACAGTTCCTGCAGAAGTAACGTGGCTGGTTCACGTTGTAGTTGTTGTAATAACAGAATTTGGTGTTTGCGCTTTCACATCTAGGACATGGAAGAAGCTTGTCTGGTTTCTTGAGAGCCGTTGATTTCTCTCCTGATGTAGTACTTGTTGTCGTGATCTCGCTCTGTTGATCACAATTGTTCTTGGAACTTCTTGGTGATGAAATCTCAGATACTGCTTTTGGCGGTTCGTTTAGATCTGATAATATGTATGGATCTTTGAATCTGTTACTTTCTTGATCACTTTTATTTGCCGGAACCTGAAAATTTTGAAGAATTTTGATTAGAATTAGCAAAAGACATGACTTACGGATATAAACATTCACTTTTTAGCCTTTTTAGTAACAATAACAAAGTAAAATTAGCTTGGTGAAAGCTGTTGAATCTGGCATGTTTTCCTAATTCAATTATAAAATAAACTTTTTGTTTGTTTGTTTATGCAATTATAAGTTTAAATCTTGTTTCCTTAATTATGCAATATTTTTCCAGTAAGAATTCATGGAAATAAAAAGTGAGATTATCAGAATACTAAAATGAAAGAAAATCAGAAAAATTTCAACCAGAAAGTCTCAAATTTTACGCTAACTCAAAAAGAATAATGAAACTAAATTTCAGATCGAGATCGACCCATTAGTAGAATCCATCAGCCAAGAAATGGGTTTGTCTCAGAATCATAAAATGGACCCGCCATGGAATCTCTCAATAAGTTCGTGATTGATTAATTAATTAACACATAACACAAAAAAAAAAAAAAATGATGAAGATTCTCATGACATACCCATATTGGTCCAATAGTTGGAGAACAAGAAGATGAAGAAGATGACGAATCCTCCTTGCTTTGATCAGAAGAAACATCGTGAACATGGGACAAAGACGATGGATCATAACGATTCACATCTAAAAGAGATGTGATTGTCCTCCCAAACAACTTTATCTCCCTATCTATAGATTTAGACATAACTATTTTATCTCCAATTATGAAACTTCTAGAAATATGAAGGTCTAATAAATGGTTTCCTCTGTTTTTTTTCTCTATGAAGATCGGAGGAAAAAAAAAGAGTATGAAGAGAAAACAAGAAGGGGCTTGAGGTTGGTATTAATGACGATAGATAGTGCATAGAAGAGAGAAAAGTACACGTCAGAATAGAGAGAGAGACATGTAGAAATATGAGAGCCACATGTTTGTGAAGAAAGTGGGCATTTTGAGATCTTTTTCACGCT
CDS Sequence
- >fgenesh2_kg.2__1221__AT1G69570.1
ATGTCTAAATCTATAGATAGGGAGATAAAGTTGTTTGGGAGGACAATCACATCTCTTTTAGATGTGAATCGTTATGATCCATCGTCTTTGTCCCATGTTCACGATGTTTCTTCTGATCAAAGCAAGGAGGATTCGTCATCTTCTTCATCTTCTTGTTCTCCAACTATTGGACCAATCAAGGTTCCGGCAAATAAAAGTGATCAAGAAAGTAACAGATTCAAAGATCCATACATATTATCAGATCTAAACGAACCGCCAAAAGCAGTATCTGAGATTTCATCACCAAGAAGTTCCAAGAACAATTGTGATCAACAGAGCGAGATCACGACAACAAGTACTACATCAGGAGAGAAATCAACGGCTCTCAAGAAACCAGACAAGCTTCTTCCATGTCCTAGATGTGAAAGCGCAAACACCAAATTCTGTTATTACAACAACTACAACGTGAACCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTATTGGACAGCTGGTGGTTCCATGAGGAACGTTCCCGTTGGCTCAGGTCGTCGCAAGAACAAAGGCTGGGCTTCTTCAAACCATTACTTGCAAGTCACTTCTGAGGATTGTGATAATAATAACTCCGGGACGATCCTTAGCTTCGGTTCTTCGGAATCTTCGGTGACAGAGGCTGGTAAGCATCAATCAAGAGATACAACAAAAATAAGCGCTGATTCAGTTTCCCAAGAACACAAAACCTACCAAGGGTTTCTTCCTCCGCAAGTAATGTTACCTAATAATTCTTCTCCTTGGCCTTACCAATGGAGTCCAACGGGTCCTAATGCTAGTTTCTACCCTGTCCCCTTTTATTGGGGATGCACGGTTCCGATATACCCTACCTCAGAGACATCACCGTGTTTAGGAAAACGGTCAAGAGATCAAACTGAAGGAAGAATCAATGATACTAATACAACAATAACTACTACAAGAGCAAGATTGGTTTCAGAACCTCTTAAAATGAATAGCGAAGCTACTAAGAGCGCGGTGTGGTCTAAGTTACCGACAAAACCCGAGAAAAAAACGCAAGGATTCAGTTTGTTCAATGGATTTGACACAAAGGGTAACAGCAACAGAAGCAGCTTGGTCACTGAAACTTCTCACAGTCTACAAGCAAACCCTGCAGCGATGTCTAGAGCTATGAACTTCAGGGAGAGCATGCAACAATAA
Protein Sequence
- >fgenesh2_kg.2__1221__AT1G69570.1
MSKSIDREIKLFGRTITSLLDVNRYDPSSLSHVHDVSSDQSKEDSSSSSSSCSPTIGPIKVPANKSDQESNRFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTSTTSGEKSTALKKPDKLLPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWASSNHYLQVTSEDCDNNNSGTILSFGSSESSVTEAGKHQSRDTTKISADSVSQEHKTYQGFLPPQVMLPNNSSPWPYQWSPTGPNASFYPVPFYWGCTVPIYPTSETSPCLGKRSRDQTEGRINDTNTTITTTRARLVSEPLKMNSEATKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVTETSHSLQANPAAMSRAMNFRESMQQ