Information report for Bo6g095390
Gene Details
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Functional Annotation
- CDF5 is a circadian regulated transcript that is antiphasic with respect to its natural antisense transcript (NAT) FLORE (AT1G69572).CDF5 transcript accumulation delays flowering. CDF5 links circadian oscillation and photoperiodism.
Homologous
- Arabidopsis thaliana: AT1G69570.1
- Brassica napus: GSBRNA2T00067590001, BnaC06G0306600ZS, GSBRNA2T00124299001, GSBRNA2T00112897001, BnaC06G0360900ZS, GSBRNA2T00101928001, BnaA07G0310700ZS, GSBRNA2T00030041001
- Brassica rapa: XP_009104997.1, Bra003994, XP_009105511.1, Bra004396
- Raphanus raphanistrum: RrC6041_p2
Gene Resources
- Pfam: PF02701
- UniProt: A0A3P6HBJ4
- EMBL: LR031880
- AlphaFoldDB: A0A3P6HBJ4
- OMA: ETPPCLG
- InterPro: IPR003851 , IPR045174
- PANTHER: PTHR31089 , PTHR31089:SF78
- PROSITE: PS01361 , PS50884
Sequences
gDNA Sequence
- >Bo6g095390
TGTCTAAATCTAGAGATATAAAGTTGTTTGGTACGACAATTACATCTCTCTCAGCTGTGAATCATTATGATCCGTCGCCGTTGTCCGCAGCTCATGGTGGTTCCGACCAGAGCAAGGAAGCTTCTTCGTCTTCCTCGTCTTCTTGTTCTCCCTCTATCAGACCAGACAGGGTATGTCACGCGAGTTCTTGTCCTTTTTTCTCTCTTCTGTTCTGTGTTAAATAACTTATAACGAACTGAGATTTGAATCAAGTTTCGTTAGGTCAACTTGAAAAGTTTTATAGGCAAAATTTAGAGATCATAGGATCAACTGACACTTGGAGCGGATTTATTATTACACGTAGTTGTTTCGGACATAGGAATCAGAACTGGTTTTGGGCATAGAACCAAGTGAAATATTCGTTAAAGGCAGCTTAAATATAAACATAAGCAACCAATTTATTTTTAAAAGTTTACCCAAATCCTTGCTATTGTTTAGTCTTCAAAATATTTGGGTTGGATTAGGAGTACGGATTTCTCGGCTCGGAACTTGTTGATTATTAAAAATATATACTGAGCCTGGCTAACCTGGTGGGGGTTCAAGAGTAGCAAATTTAACGGTCACCATTTTTACCATGCATCCATTACTAATAAAAGACAAGAATTGGTTATTTGCTTGACTTTTTTATAACCCTAACACATGGCTATTGGCTATTGCTAAACCCTAATCAAAATTCTGCAAAACTTTCAGGTTCTCGCTGCCAAAAATGGGCAAGAAAATAGCAGATTCAAGGATCCTTACACATTATCCCATCTTAACGAACCGCCAAAAGCAGCATCTGAGATTTTACCACCAATAAGCTCCAAGACTAACACCGATCAACAGAGCGAGCTCACAACAACAAGTACATCAGCAGCTGATAAACCAACAACTCTCAAGAAACCGAACAAGATACTTCCATGTCCGAGGTGCGAAAGCGCAAACACCAAATTCTGTTACTACAACAACTACAACGTGAGCCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTACTGGACTGCTGGTGGATCCATGAGAAACGTCCCCGTTGGCTCTGGCCGCCGCAAGAACAAAGGATGGCCTTCTTCGAACCATTACTTGCAGGTCACTTCTGAGGACTATGAGAATAACAACAACTTGGGAACGATCCTCAGTTTCGGTTCTTCAGAATCCTCGGTTACAGAGACTGGTAAGCATCAGCCAGGAGATACAAAGATAACCGCTGATTCAGCTTCTCAAGAACAAAGAACCCGTCAAGGGTTTCTTCCTCCGCAAGTAATCTTTCCGAATAATTCTTCCCCTTGGCCTTACCAATGGAGTCCAACTGGTCCTAATGCTAATTTTTACCCTATACCTTTCTACTGGGGCTGCACGGTTCCTGTATGGCCTACCTCAGAGACTCCACCATGTTTAGGGAAACGATCAAGGGATCAAACTGAAGGAGGAATGAAAGATGCTACTACTATAACAAGAGCAAGAGTGGTTTCAGAAACTATTAGCATTAGCGAAGCTACTAAGAGCACGGTGTGGTCGCCAAAACCAGAGAGAAAAACAGAAGGATTCAGTCTGTTCAATGGATTTGAGACAAAGGGTAGTAACAGAAGAAGCTTGGTCCCTGAAACGTCTATCAATATACAAGCAAACCCTGCAGCGATGTCTAGATCTATGAACTTCAGGGAGAACATGCAACAATAA
CDS Sequence
- >Bo6g095390
ATGTCTAAATCTAGAGATATAAAGTTGTTTGGTACGACAATTACATCTCTCTCAGCTGTGAATCATTATGATCCGTCGCCGTTGTCCGCAGCTCATGGTGGTTCCGACCAGAGCAAGGAAGCTTCTTCGTCTTCCTCGTCTTCTTGTTCTCCCTCTATCAGACCAGACAGGGTTCTCGCTGCCAAAAATGGGCAAGAAAATAGCAGATTCAAGGATCCTTACACATTATCCCATCTTAACGAACCGCCAAAAGCAGCATCTGAGATTTTACCACCAATAAGCTCCAAGACTAACACCGATCAACAGAGCGAGCTCACAACAACAAGTACATCAGCAGCTGATAAACCAACAACTCTCAAGAAACCGAACAAGATACTTCCATGTCCGAGGTGCGAAAGCGCAAACACCAAATTCTGTTACTACAACAACTACAACGTGAGCCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTACTGGACTGCTGGTGGATCCATGAGAAACGTCCCCGTTGGCTCTGGCCGCCGCAAGAACAAAGGATGGCCTTCTTCGAACCATTACTTGCAGGTCACTTCTGAGGACTATGAGAATAACAACAACTTGGGAACGATCCTCAGTTTCGGTTCTTCAGAATCCTCGGTTACAGAGACTGGTAAGCATCAGCCAGGAGATACAAAGATAACCGCTGATTCAGCTTCTCAAGAACAAAGAACCCGTCAAGGGTTTCTTCCTCCGCAAGTAATCTTTCCGAATAATTCTTCCCCTTGGCCTTACCAATGGAGTCCAACTGGTCCTAATGCTAATTTTTACCCTATACCTTTCTACTGGGGCTGCACGGTTCCTGTATGGCCTACCTCAGAGACTCCACCATGTTTAGGGAAACGATCAAGGGATCAAACTGAAGGAGGAATGAAAGATGCTACTACTATAACAAGAGCAAGAGTGGTTTCAGAAACTATTAGCATTAGCGAAGCTACTAAGAGCACGGTGTGGTCGCCAAAACCAGAGAGAAAAACAGAAGGATTCAGTCTGTTCAATGGATTTGAGACAAAGGGTAGTAACAGAAGAAGCTTGGTCCCTGAAACGTCTATCAATATACAAGCAAACCCTGCAGCGATGTCTAGATCTATGAACTTCAGGGAGAACATGCAACAATAA
Protein Sequence
- >Bo6g095390
MSKSRDIKLFGTTITSLSAVNHYDPSPLSAAHGGSDQSKEASSSSSSSCSPSIRPDRVLAAKNGQENSRFKDPYTLSHLNEPPKAASEILPPISSKTNTDQQSELTTTSTSAADKPTTLKKPNKILPCPRCESANTKFCYYNNYNVSQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDYENNNNLGTILSFGSSESSVTETGKHQPGDTKITADSASQEQRTRQGFLPPQVIFPNNSSPWPYQWSPTGPNANFYPIPFYWGCTVPVWPTSETPPCLGKRSRDQTEGGMKDATTITRARVVSETISISEATKSTVWSPKPERKTEGFSLFNGFETKGSNRRSLVPETSINIQANPAAMSRSMNFRENMQQ