Information report for fgenesh2_kg.1__1710__AT1G15550.1
Gene Details
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Functional Annotation
- Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (󟵈) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).
Homologous
- Actinidia chinensis: CEY00_Acc12586
- Brassica napus: BnaA09G0626200ZS, BnaC05G0130100ZS, BnaA06G0105000ZS, BnaC08G0483800ZS, BnaC02G0328000ZS, BnaA02G0244500ZS
- Brassica oleracea: Bo5g021060, Bo8g105980
- Brassica rapa: Bra026122, Bra026757, Bra008480
- Juglans regia: Jr07_30550
- Manihot esculenta: MANES_11G050500, MANES_04G120200
- Prunus avium: Pav_sc0000716.1_g300.1.mk
- Prunus persica: PRUPE_3G075600
Gene Resources
- Pfam: PF14226
- UniProt: D7KDH1
- EMBL: GL348713
- AlphaFoldDB: D7KDH1
- KEGG: aly:9326172
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: D7KDH1
- eggNOG: KOG0143
- STRING: 81972.D7KDH1
- HOGENOM: CLU_010119_16_3_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__1710__AT1G15550.1
ATCATATTGCTGAAATAATTAACAACAATTTATTAATCAAACTAACTAGCGGATCACAAATATTATTATCTCATGATTAATCATTCCTCTCTGTGATTTCTAATCATTGAAAGAGCTTTATTGAAGTGAGTTGCTTTTGTTCGAAGATACTCTGTCCATGTGACCGATCGGTATAGAGGCAATTCAACCGGACTAACCAGCTTCGGGACAGGTGATATCTTGATATCAGATTGTGGACCCCAAAGGAATGCTACAGATAACCGGGCTCTGGTTTGGTTAACCCTAGCGCGGTGCAGCACGCTTTTAAACAATCCGTTGGATAAGATGTGGAAGAGGTCACCAACGTTGACCACAAGCGAGCCAGGAACCGGTGGCACGGTGACCCAACCAAGATCATCGCGAAATACTTGTAGACCGGCGGTATTGTTCTGGCACAGAATGGTTAGGAGGGTGGAGTCGGTATGAGCTGCTAGACCCATAGCTCGGTCCGGTTCAGGACAAACCGGGTAGTGATTTAGCTGGAGAGCAGCTTGGGCCCAATTTAAATCTGAATTTAGACTGGCCCATTCAACGTCCTCTTCGCTGACCCCAAGTGATTTTAGTGCTAACCACATCAATTTCGATGCCAACTTTTTCATCTGTTCCTCGTACTCTTCAACGATGTCGCTGTTAATTAAAAACGAATTGTATTCACTAATTAGTACAGATGAGATTTAGACTACATTAAATATGTGTACGACCTTTGAATAAAAAATTAAAACAAGAAAGCAAGTTGGGGTTTTTTGGTTTTGTTTTCTCCGATACGATAACAAACATATATCTTCAAAATCTTTAAGGTGGGTCCACTACTACACTAGATTTCATTATGCACTTAACTCTTAAATCCACTAAACTCCGAGGACATGGCAAATTTCGGTTGCTTCTGTTATCTATGCCCCTTGTTACTACCTATAGGGCGTCCAACGTTTGTGGATGTTCTACCTTAAATATAAAAATTGTGTCCTTATTTATAACGTTTTCGTTAATGTAGAAAAACTTTTAAATACAAATTTAAATTCACCCATTTATAAGTATAAGTATATAGGATTGAGTGTTTGAAATATATACCAGTAGTTGAGGTGAAGTTGGGGCCAAAGTTTACGGAAATCGTTGAGAGGGGAACCAGTGATGGTGAAACCTTCGGACCACATTTTCTTATTGAAGAAAGACGCGATACGAGCGACGCCATAACCGGAGACACCTGTCTCCGACCGGGCAGCCTTAAGCTTGCGCTGGACAGGTAGCCGGAAGAGGCTACCGGTGAGAAACTCAATGTCTTGGAGAAGTCCCAAAGGCACGCCGTGGTTTGCGATCTGGAAGGCACCCCAAGTTCTACATGCATGGCCGATTTGGTTGGCCGCGTCCGGGTGGTCCAGGTCGATGAGAGGGATGTTTTCACCGGTGGTCGGAGGAGAAGGAGCAGCGGCGAAGAGGAGATCGTCTTTAGGGGTCCACTTGTAAGAATCCGGGAGCTCACGGAGGGAAGTGAAGTCAGGTTGGTGAGAGTGTGGGAGGTGAATGGGATGCCCTCTAAACACATCTGTTAACATTGCAGGCATCTTGCTGATCTTGTTTTTAAAAATTTATAAATCTGATAGATGTTTGTGTATTTTTCTTATGAGAAGTGTGATGTTTGGTGAT
CDS Sequence
- >fgenesh2_kg.1__1710__AT1G15550.1
ATGCCTGCAATGTTAACAGATGTGTTTAGAGGGCATCCCATTCACCTCCCACACTCTCACCAACCTGACTTCACTTCCCTCCGTGAGCTCCCGGATTCTTACAAGTGGACCCCTAAAGACGATCTCCTCTTCGCCGCTGCTCCTTCTCCTCCGACCACCGGTGAAAACATCCCTCTCATCGACCTGGACCACCCGGACGCGGCCAACCAAATCGGCCATGCATGTAGAACTTGGGGTGCCTTCCAGATCGCAAACCACGGCGTGCCTTTGGGACTTCTCCAAGACATTGAGTTTCTCACCGGTAGCCTCTTCCGGCTACCTGTCCAGCGCAAGCTTAAGGCTGCCCGGTCGGAGACAGGTGTCTCCGGTTATGGCGTCGCTCGTATCGCGTCTTTCTTCAATAAGAAAATGTGGTCCGAAGGTTTCACCATCACTGGTTCCCCTCTCAACGATTTCCGTAAACTTTGGCCCCAACTTCACCTCAACTACTGCGACATCGTTGAAGAGTACGAGGAACAGATGAAAAAGTTGGCATCGAAATTGATGTGGTTAGCACTAAAATCACTTGGGGTCAGCGAAGAGGACGTTGAATGGGCCAGTCTAAATTCAGATTTAAATTGGGCCCAAGCTGCTCTCCAGCTAAATCACTACCCGGTTTGTCCTGAACCGGACCGAGCTATGGGTCTAGCAGCTCATACCGACTCCACCCTCCTAACCATTCTGTGCCAGAACAATACCGCCGGTCTACAAGTATTTCGCGATGATCTTGGTTGGGTCACCGTGCCACCGGTTCCTGGCTCGCTTGTGGTCAACGTTGGTGACCTCTTCCACATCTTATCCAACGGATTGTTTAAAAGCGTGCTGCACCGCGCTAGGGTTAACCAAACCAGAGCCCGGTTATCTGTAGCATTCCTTTGGGGTCCACAATCTGATATCAAGATATCACCTGTCCCGAAGCTGGTTAGTCCGGTTGAATTGCCTCTATACCGATCGGTCACATGGACAGAGTATCTTCGAACAAAAGCAACTCACTTCAATAAAGCTCTTTCAATGATTAGAAATCACAGAGAGGAATGA
Protein Sequence
- >fgenesh2_kg.1__1710__AT1G15550.1
MPAMLTDVFRGHPIHLPHSHQPDFTSLRELPDSYKWTPKDDLLFAAAPSPPTTGENIPLIDLDHPDAANQIGHACRTWGAFQIANHGVPLGLLQDIEFLTGSLFRLPVQRKLKAARSETGVSGYGVARIASFFNKKMWSEGFTITGSPLNDFRKLWPQLHLNYCDIVEEYEEQMKKLASKLMWLALKSLGVSEEDVEWASLNSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILCQNNTAGLQVFRDDLGWVTVPPVPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLVSPVELPLYRSVTWTEYLRTKATHFNKALSMIRNHREE