Information report for BnaC08G0483800ZS
Gene Details
|
|
Functional Annotation
- Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (󟵈) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).
Homologous
- Brassica oleracea: Bo8g105980, Bo5g021060
- Brassica rapa: Bra026757, Bra026122, Bra008480
- Juglans regia: Jr07_30550
- Manihot esculenta: MANES_11G050500, MANES_04G120200
- Prunus avium: Pav_sc0000716.1_g300.1.mk
- Prunus persica: PRUPE_3G075600
Gene Resources
- Pfam: PF14226
- UniProt: A0A3P6FZY7
- EMBL: LR031879
- AlphaFoldDB: A0A3P6FZY7
- OMA: CSITEEY
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- SMR: A0A3P6FZY7
Sequences
gDNA Sequence
- >BnaC08G0483800ZS
TGCCTACAGTGTTAACAGATGTCTTTAGAGGCCATCCCATTCACCTCCCACACACTCACCAACCTGACTTCACATCCCTTAGTGAGCTCCCGGATTCTTACACGTGGACCTCCAAAGACGATCCCCTCTTCACCGCTCCTCCTTCCCCTCCGGGCGCCGGTGAAAGCATACCTCTCATTGATCTGAATCACCCCGACGCGGCCAACCAAATCGGCCGTGCATGTAGAACGTGGGGTGCGTTCCAGATAGCAAACCACGGCGTGCCTTTGGAACTTCTCCAAGACATTGAGTTTCTCACCGGTAGTCTTTTTCAGCTACCAGTCCAGCGCAAGCTTAAGGCGGCTCGGTCAGATGCAGGTTTCTCTGGCTACGGCGTCGCTCGTATCTCATCTTTCTTTAATAAGAAAATGTGGTCCGAAGGCTTCACCATCACCGGTTCCCCTCTCAATGATTTCCGTAAACTTTGGCCCCAACTTCACCTTAACTACTGGTACACACATATTCTTTCTCAAGAAAAAAAAAAACTACTGGTACATATCTCTATATGTCTGCTTATAGTTATATAATTATATTATGTATAGTGCCGTCATATTTCTTCGAAAAATATTAACAGTATATATGTTTTAAAATTATAGATCCTAAATTTAGAAATATAAATCACTTGTTTAAAAAAAATTATACTCTAATATATTTGAAAAACAATTTAAGAAAAAAAACTAGGTTATGTTCGGCTCAATTTACATATGCTAAAGACGGCCATGATAGTGTACTATACATTGGTTGAATAATAACATGGGAACATGAATAACAGATGCAACCGATAATTTCATGTCGTGAACTTGATTTTTGTTTGTTTTCTTGTTTATTTAAAAGATCGTACAAATTTTACATCTGTACTAATTAAAGCATAATATTCGTTCTCTTTTTAATTAACAGCGACATCGTTGAACAGTACGAGGAACAAATGCAAAAGTTGGCATCGAAGTTGATGTGGCTATCACTGAATTCACTTGGCGTCAGCGAAGAAGACATTAAATGGGCCAGGGTCAGTTCAGATTTAAACTGGGCCCAATCTGCCCTCCAGCTAAACCACTACCCGGTTTGTCCTGAACCCGATCGGACTATGGGTCTAGCACCCCATACCGACTCCACCCTCTTGACCATACTCTACCAGAACAATACCGCCGGTCTCCAAGTATTTCGTGATGATCTTGGTTGGGTCACCGTGCCACCGGTTCCTGGCTCGCTCGTGGTCAATGTTGGTGATCTTTTCCATATTCTATCCAACGGTTTGTTTAAAAGCGTGATTCACCGTGCTCGGGTTAACCAAACCAGATCCCGGTTATCCGTAGCTTTCCTTTGGGGTCCACGGTCCGATACAAAGATATCACCTGTACGAAAACTGGTTAGTCCTGATGAATCGCCTTTATATCGATCGGTCACATGGGCAGAGTATCTCCGAACAAAAGCAACCCACTTCAATAAGGCTCTTTCAATGATTAGAAATCACAGAGAGAAATAA
CDS Sequence
- >BnaC08G0483800ZS
ATGCCTACAGTGTTAACAGATGTCTTTAGAGGCCATCCCATTCACCTCCCACACACTCACCAACCTGACTTCACATCCCTTAGTGAGCTCCCGGATTCTTACACGTGGACCTCCAAAGACGATCCCCTCTTCACCGCTCCTCCTTCCCCTCCGGGCGCCGGTGAAAGCATACCTCTCATTGATCTGAATCACCCCGACGCGGCCAACCAAATCGGCCGTGCATGTAGAACGTGGGGTGCGTTCCAGATAGCAAACCACGGCGTGCCTTTGGAACTTCTCCAAGACATTGAGTTTCTCACCGGTAGTCTTTTTCAGCTACCAGTCCAGCGCAAGCTTAAGGCGGCTCGGTCAGATGCAGGTTTCTCTGGCTACGGCGTCGCTCGTATCTCATCTTTCTTTAATAAGAAAATGTGGTCCGAAGGCTTCACCATCACCGGTTCCCCTCTCAATGATTTCCGTAAACTTTGGCCCCAACTTCACCTTAACTACTGCGACATCGTTGAACAGTACGAGGAACAAATGCAAAAGTTGGCATCGAAGTTGATGTGGCTATCACTGAATTCACTTGGCGTCAGCGAAGAAGACATTAAATGGGCCAGGGTCAGTTCAGATTTAAACTGGGCCCAATCTGCCCTCCAGCTAAACCACTACCCGGTTTGTCCTGAACCCGATCGGACTATGGGTCTAGCACCCCATACCGACTCCACCCTCTTGACCATACTCTACCAGAACAATACCGCCGGTCTCCAAGTATTTCGTGATGATCTTGGTTGGGTCACCGTGCCACCGGTTCCTGGCTCGCTCGTGGTCAATGTTGGTGATCTTTTCCATATTCTATCCAACGGTTTGTTTAAAAGCGTGATTCACCGTGCTCGGGTTAACCAAACCAGATCCCGGTTATCCGTAGCTTTCCTTTGGGGTCCACGGTCCGATACAAAGATATCACCTGTACGAAAACTGGTTAGTCCTGATGAATCGCCTTTATATCGATCGGTCACATGGGCAGAGTATCTCCGAACAAAAGCAACCCACTTCAATAAGGCTCTTTCAATGATTAGAAATCACAGAGAGAAATAA
Protein Sequence
- >BnaC08G0483800ZS
MPTVLTDVFRGHPIHLPHTHQPDFTSLSELPDSYTWTSKDDPLFTAPPSPPGAGESIPLIDLNHPDAANQIGRACRTWGAFQIANHGVPLELLQDIEFLTGSLFQLPVQRKLKAARSDAGFSGYGVARISSFFNKKMWSEGFTITGSPLNDFRKLWPQLHLNYCDIVEQYEEQMQKLASKLMWLSLNSLGVSEEDIKWARVSSDLNWAQSALQLNHYPVCPEPDRTMGLAPHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPVPGSLVVNVGDLFHILSNGLFKSVIHRARVNQTRSRLSVAFLWGPRSDTKISPVRKLVSPDESPLYRSVTWAEYLRTKATHFNKALSMIRNHREK