Information report for DCAR_029206
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Arabidopsis thaliana — AT1G62830
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A175YDQ2
- EMBL: CP093351
- KEGG: dcr:108200204
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A175YDQ2
Sequences
CDS Sequence
- >DCAR_029206
ATGGACCCTTCAATTACAACCCCTTCTTATCAATTTCAACTTTTAGGCAATAACCCACATGATCTTTCACTTTCCGGCAATGAGCCACCTCAAGAAATCCCAAATTCCGGCGATCAACCGGCCGAAATCTTAGTTTACGGTAGCGACCCGCTTCAAGAATTCCCAATTTCCGGCGACCCACCGGCCGAAATCTCAGTTTGTGGCAACAACCCACCTCCGGAAATATCAGTTTCTGATTACCCAGATGAAAATATGAACAATTTGACATCTGGGGAGGATAGAACTGAGATTGTTGCTTTGCCGGAGGATAATCCGGCGGGTTCCGGCGAACCCCAATTGAAGAAGCGCCGGCGCAGGAAGAAGCAGTTCCCGGAGATGATATCTTCGGCAGCTGCTGTCTCGGGTTTTCGAGTAATGCGCCCGAAATCAACCCCAACTACTACTACTGCTGATGATGAATTTGAAGAGCTTGCTGATCATTCTTTGTCGAAGTCTCGTCGTAGGAGGATTTCTGATTTGGCCAAAGAGGTTGATGTGGAGGCGATGATTGCAATTTCTGTTGGGTTTACTGTTGATTCGCTCACGGAGGAAGAGATTGAAGCCAATGTAGTATCTCAAATTGGAGGGATTGAGCAAGCTAATTATATTGTTGTTAGGAATCATATTCTGGCACGGTGGAGATCGAATGTTGATGTTTGGCTTACTAAAGATCATGCTCTTGAGTCGATTCGAGCTGAGCATAGGAGTCTTGTCAATTCGGCTTACGCGTTTTTGTTAAACCATGGTTATATAAATTTTGGACTTTCTCCTGCTATCAAAGAAGTGAAATGTAGACCGGTGGAAGGGAGATATAGGGGTGATGTTATTGTGATTGGTGCTGGATTATCGGGTTTAGTGGCAGCTAGACAATTGATCTATTTGGGGTTTAAAGTTGCAGTCTTGGAAGGTAGGGCTCGACCTGGTGGGAGGGTTAGGAGCAAAAAGATGACAGGAGAAGGCGTGAAATCAGATATTGTTGCAGCTGCTGATCTTGGTGGGAGTGTGTTGACTGGAATTAATGGGAATCCATTAGGAGTTTTGGCTAGACAGTTGGGACTGCCACTACACAAGGTGAGAGATATTTGTCCTCTTTATTTGCCTGACGGTAAGACTGTAAATTCTAAAATGGATACTCGTGTTGAAATTTCATTTAATAAGTTGTTAGATAGGGTCTGTAAGCTTAGGCAGACAATGATGGATGAGGTTAAATCAGCTGATGTTTCGTTAGGGACTGTGTTAGAGGCCTTTAGAAGAGTGTATGGAGTTGCTGATGATCCCCAGGAGCGAATGCTGTTGGACTGGCATTTGGCAAACCTTGAATATGCCAATGCAACTTTGATGTCAAATTTGTCAATGGCATTTTGGGATCAGGATGATCCGTATGAAATGGGTGGTGATCATTGTTTCATTCCTGGTGGAAATGAGACGTTTATCAGGGCACTAATGGAGGGCATTCCCATTTTCTATGACCAGATGGTTGAGAGCATACATTATGGAAGTGATGGTGTTTTGGTGTACGCTGGAGGGAAACAGTATCAGGCAGATATGGTTTTGTGCACAGTGCCGTTGGGTGTGTTAAAGAAGGGAACAATTGAGTTTGTCCCTGAGCTTCCACAGAGAAAGCGGGATGCTATTAGTAGATTAGGATTTGGGTTGTTGAACAAGGTTGCGATCCTTTTTCCCTATGATTTTTGGGGTGGGGAGATAGATACTTTTGGGCATTTGACAGAGGAGTCAAGCACCAGGGGTGAATTCTTTTTGTTCTACAGTTACTCTTCTGTATCTGGAGGCCCACTTCTTATCGCTCTTGTGGCTGGGGAAGCTGCAATCAAATTCGAACAGATGTCTCCTATAGAAGCTGTGAATAAGGTTTTGGAGGTCTTGAAGGGTATATTTAATCCGAAAGGGATTGCTGTTCCTGAGCCGCTGCAGGCTGTTTGTACTCGTTGGGGACAAGATCATTTTACATATGGATCTTATTCTTACGTTGCAATTGGCTCCTCAGGAGATGATTATGATGTCCTGGCAGAAAGTGTAGATGGAAGACTTTTCTTTGCAGGAGAAGCTACTAACAAACAATATCCCGCCACAATGCATGGAGCTTTTCTTAGTGGGATGAGAGAGGCTGCTAATATGCTGAGAGTTGCTACGAGGAGGTCAGCGGTTCAAGCTGAAAAGCAGAATACTGTTACTGACGAACATAGTGATTTAGATAGATTATTTGAGACCCCAGACCTTAGATTCGGAAGTTTTAATTGTTTATTTGATCCTAGTTCAAGCGATCCTGAATCAACTATTTTGTTACGAGTTGCGTTCGAAGGCGAAAAATCATATTCAGGAGTTCTGCATCTTTATGGTTTAATCAAGAGGAGGCAAGTTATGGAACTGAGTAATGTAGACGGAGATTTTGACACGATGAGAATGTTGAGAGATTTTGGGGTGAAACTTGTCGGGAGAAAAACTTTATGCAGCACAGCTGAATCTCTCATCACCTGCATTAAACTAGGCAGATCCAGCCTAAACTGA
Protein Sequence
- >DCAR_029206
MDPSITTPSYQFQLLGNNPHDLSLSGNEPPQEIPNSGDQPAEILVYGSDPLQEFPISGDPPAEISVCGNNPPPEISVSDYPDENMNNLTSGEDRTEIVALPEDNPAGSGEPQLKKRRRRKKQFPEMISSAAAVSGFRVMRPKSTPTTTTADDEFEELADHSLSKSRRRRISDLAKEVDVEAMIAISVGFTVDSLTEEEIEANVVSQIGGIEQANYIVVRNHILARWRSNVDVWLTKDHALESIRAEHRSLVNSAYAFLLNHGYINFGLSPAIKEVKCRPVEGRYRGDVIVIGAGLSGLVAARQLIYLGFKVAVLEGRARPGGRVRSKKMTGEGVKSDIVAAADLGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPDGKTVNSKMDTRVEISFNKLLDRVCKLRQTMMDEVKSADVSLGTVLEAFRRVYGVADDPQERMLLDWHLANLEYANATLMSNLSMAFWDQDDPYEMGGDHCFIPGGNETFIRALMEGIPIFYDQMVESIHYGSDGVLVYAGGKQYQADMVLCTVPLGVLKKGTIEFVPELPQRKRDAISRLGFGLLNKVAILFPYDFWGGEIDTFGHLTEESSTRGEFFLFYSYSSVSGGPLLIALVAGEAAIKFEQMSPIEAVNKVLEVLKGIFNPKGIAVPEPLQAVCTRWGQDHFTYGSYSYVAIGSSGDDYDVLAESVDGRLFFAGEATNKQYPATMHGAFLSGMREAANMLRVATRRSAVQAEKQNTVTDEHSDLDRLFETPDLRFGSFNCLFDPSSSDPESTILLRVAFEGEKSYSGVLHLYGLIKRRQVMELSNVDGDFDTMRMLRDFGVKLVGRKTLCSTAESLITCIKLGRSSLN