Information report for SIN_1026099
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Capsicum annuum: T459_25488
- Daucus carota: DCAR_029206
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Nicotiana attenuata: A4A49_07894
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
- Solanum tuberosum: PGSC0003DMG400044864
Sequences
CDS Sequence
- >SIN_1026099
ATGGAAGCCACCGGGTCACCACCACACTCCACCACCGCCGTTGCTCCCGCCGCAGAAGATAATGCGGCAACCATTGGGTTACGACCAGACTCCACCACCGACATAGCTCCCTCCCCGGAAAATAATGCCACACAGGATCCGGCCGTTTCTCAATCCATATCCAAATCTACTTCTGAGCCCATGGAAATCATCGGTTCCACCGCTGAACCCATGGAAATTAACGATGTCGCCGCCGGGACCGCTCCGGAAAGTCAAACGCAACTGGAGCCCCAACCGCGCAAGAAACGGCGCCGGCGCAAGAAAATCTTCACGGACATGATCTCTTCGTCTGCCTCGCGTCTTCGCCTTCTTCGCACGCAGCCCAAACCCTCCGCCACCGGAGACCTCGAAGACTCTGCTTCCGGACAACCCCGCAAGCGCAGGGGGCCCGCCGACCTCTCTAAGGAGGTCGACATTGAAGCCCTAATTGCAATATCTGTTGGATTCCCGGTAGATTCCCTCACGGAGGAAGAAATCGAGGCGAATGTGGTCTCCCAAATCGGCGGCGCCGAGCAGGCCAACTATATTATCGTGCGCAACCACATTCTGGCCCGGTGGCGGTCAAATGTAGCGGTTTGGCTCACCAAGGACCAAGTGTTGGAGTCCATACGCGCCGAGCACAAAAACCTCGTGAACGCCGCCTATAATTTCCTTCTCCACCATGGGTATATCAATTTTGGTGTTGCCCCAGCGATCAAGGATGTCAAGTCCAAGTTGTTCAGTGAAACGCCAAAAGGAAGCGTGATTGTGATAGGTGCTGGGCTGTCAGGTTTAGTTGCTGCTAGGCAGTTGATTTTTCTGGGCTTTAAGGTGGTTGTGCTTGAAGGCCGGGCCAGGCCTGGAGGTAGAGTTCGAACCAAGAAAATGAGTGGAACTGATGGGAGTGTTGTGGGTGCGGCGGATTTAGGTGGCAGCGTCTTGACGGGAATTAATGGGAATCCTTTGGGGGTTTTAGCCCGACAGCTTGGGTTTCCGCTTCACAAGGTGAGGGATATCTGTCCTTTGTACTTGCCCAATGGTCGAATGGTTAATTCTGATGTTGATTCAAAAGTAGAGGTCTCGTTTAATAAACTGTTGGATAGGGTTTGTAAACTTAGGCAGGGGATAATGGATGAGATCAGGAGTGTGGACATTTCATTGGGGACGGCCTTGGAGGCATTTAGGCGCGTGTATAAAGTAGCGGAGGAGCCGTTGGAGCGGATGCTATTGGATTGGCATTTGGCAAATCTTGAGTATGCCAATGCCACACTGATGTCCAATTTGTCCATGGCTTTCTGGGATCAGGATGACCCATATGAAATGGGTGGGGATCATTGTTTTATACCTGGAGGGAATGAGAGGCTCATTAGGGCTTTGGCAGAGGACCTTCCAATTTTCTACGATCATCCAGTAGAGAGCGTGAGATATGGAATCCCACTTGGGGTGCTCAAGAAGGGAGAAATAGAGTTTGTACCGGAGCTTCCTCAAAGGAAAAAAGATGCGATTGGGAGACTAGGATTTGGGTTATTAAATAAAGTAGCCATTTTGTTCCCGTACGATTTTTGGGGTGGAGAAATTGATACTTTCGGGCATTTGACAGAGGACCCTAATATGAGGGGTGAATTCTTTCTCTTTTATAGTTATTCTTCTGTAGCTGGTGGACCTCTCCTTGTTGCTCTTGTGGCTGGAGAAGCTGCTGTCAAGTTTGAAAGGATGTCTCCAATTGAATCAGTAAGCAGGGTGTTGGAAATTTTGAAGGGTATTTTCAGCCCAAAAGGAATTGCAGTTCCAGATCCAGTTCAAGCAGTTTGTACTCGTTGGGGTCAGGATCAGTTCTCATATGGCTCATATTCTTATGTTGCAATTGGTGCTTCAGGAGATGATTATGATATTCTCGCAGAGAACGTCGCTGACCGAGTTTTTTTTGCTGGAGAAGCCACTAACAAACAGTATCCAGCCACAATGCATGGGGCTTTTCTCAGTGGGATGAGAGAGGCTGCTCACATAATGAGGGTAGCCGGGAGGAGATCAGTTGCTCCAGCTGCAAAAGTGAATACTGTAAATTACGAAAGCAAGGATTTGGATCCACTGTTTGAGACACCTGATCTTGCATTTGGCAGCTTTTCAATTTTGTTTGATCCACAGTCAACAGATATGGAATCAAATGCTTTGTTGCGAGTTGCTGTTGGGAGCGAGAAGTCGGACTCTGATAATATATATCTCTATGGCTATATTCAGAGGAAGCAGGCCATTGAGCTGAATACTTTGGAAGAAGATGTGAAGAGGATGGAGATGTTAACCCACAACTTTCAGGTGAGGTTGGTTGGAAGTAACAGCTTATGTAATGCTGCAGAGTCTCTCATCAGCAAAATCAAATCAGGTAAATCAGCTTCAGCATAG
Protein Sequence
- >SIN_1026099
MEATGSPPHSTTAVAPAAEDNAATIGLRPDSTTDIAPSPENNATQDPAVSQSISKSTSEPMEIIGSTAEPMEINDVAAGTAPESQTQLEPQPRKKRRRRKKIFTDMISSSASRLRLLRTQPKPSATGDLEDSASGQPRKRRGPADLSKEVDIEALIAISVGFPVDSLTEEEIEANVVSQIGGAEQANYIIVRNHILARWRSNVAVWLTKDQVLESIRAEHKNLVNAAYNFLLHHGYINFGVAPAIKDVKSKLFSETPKGSVIVIGAGLSGLVAARQLIFLGFKVVVLEGRARPGGRVRTKKMSGTDGSVVGAADLGGSVLTGINGNPLGVLARQLGFPLHKVRDICPLYLPNGRMVNSDVDSKVEVSFNKLLDRVCKLRQGIMDEIRSVDISLGTALEAFRRVYKVAEEPLERMLLDWHLANLEYANATLMSNLSMAFWDQDDPYEMGGDHCFIPGGNERLIRALAEDLPIFYDHPVESVRYGIPLGVLKKGEIEFVPELPQRKKDAIGRLGFGLLNKVAILFPYDFWGGEIDTFGHLTEDPNMRGEFFLFYSYSSVAGGPLLVALVAGEAAVKFERMSPIESVSRVLEILKGIFSPKGIAVPDPVQAVCTRWGQDQFSYGSYSYVAIGASGDDYDILAENVADRVFFAGEATNKQYPATMHGAFLSGMREAAHIMRVAGRRSVAPAAKVNTVNYESKDLDPLFETPDLAFGSFSILFDPQSTDMESNALLRVAVGSEKSDSDNIYLYGYIQRKQAIELNTLEEDVKRMEMLTHNFQVRLVGSNSLCNAAESLISKIKSGKSASA