Information report for CsGy1G020160
Gene Details
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Functional Annotation
- Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Arabidopsis thaliana — AT4G30200
- Oryza sativa — LOC_Os02g05840
Gene Resources
- Pfam: PF07227
- UniProt: A0A0A0LUM5
- EMBL: CM002922
- AlphaFoldDB: A0A0A0LUM5
- KEGG: csv:101220456
- OMA: FCTSKAG
- InterPro: IPR003961 , IPR032881 , IPR036116 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- SUPFAM: SSF49265
- OrthoDB: A0A0A0LUM5
- CDD: cd00063 , cd15521
- eggNOG: ENOG502QR8D
- STRING: 3659.A0A0A0LUM5
Sequences
CDS Sequence
- >CsGy1G020160
ATGCATGTTCATCTTATTTATGAAGTCAAACCCAATCTGACTCAACTTAAACAGGACGGCACTGGTACCTTTTTGACGTTTGATTTTCTGTTTTGTTTTTTCTTAACTTTGATGTGCATCCTCGTCTTCTATTTTGGAGCTGCTCTCGAACCATTAAAATCCAGTATGATGAGTCTGGAGAAGAAAAGGAATTTGGTCTATGAAATATCAGATCAGCCACATGCTCCTGAACTGCTTCAGTCCTGGAGTCGACAAGAGATTTTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGGAAATATACTGGATTAACAAAACTAAAAATAATTGAGAACCTTCTGAAAATTGTTGGTAAAAAGAAATCAGGGTCAACTGAGGATGTAACAGACCTCGACAATCAGTCTTCTCCTTGTCCTTCTCCAAATATTTCCAAACGGCAAAGAAAAATTGATCAGCCAGCACGGCTTCCTGTTCCTGTAAACAATAGTCCAATCAGTAACACTAGGACTGACTCAAATATTGCAGTGTACTGCAGAAATTCGGCATGCAAAGCTAACATAAATCAAGATGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGTTATCAGTATGATGATAATAAGGATCCTAGTCTGTGGTTAAGTTGCAGCTCTGACCCACCATTTCAAAGCACTTCATGTCGTATGTCATGCCATCTTGAATGTGCACTGAAGCATGAAAAATCTGGGATTTCTAGAGGACAGCAAACTGGGATTGAAGGGACTTTCTGTTGTGTATCTTGTGGAAAAGTCAATGACTTGATTGGGTGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACAAGACGGGTGGCTATCCTGTGTTACCGCATCTCTTTAAGCAAAAAGCTTTTGAGTGAAGATGAAAAGTTTCAAGACGTTTATCAGATTGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAGGTGGGTCCTTTGGCTGGTGTACCAGTCGGTACGGGCAGAGGAATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCTCGTTAGCCATCGATTCGCTCGACACCCTGCTCTCCACAAAGATCTTACATCACTTGCCCAGTTCCATGATACAAGATACTAATTTGGTAGCTACAAACTTCTTAAGGTTCGAAGATGTTGATGCAACATACGTTGCAGTGGTTGTGGGTACTGAAGATGTTTCTTGTGGAGAAACCATTGGTTACAGGCTATGGCATCGAAAGGCAGGCGAAACAGATTACCCTATCGAGCCAACTTGCACCTTGTCTCAACCAAATTTGAGGTTTGTCGTCCGAGGACTAACCCCATCTTCAGAGTACTATTTCAAAGCCATTTCCTTTGATGGGACAGGCGATTTGGGGACATGTGAAGTTCAAGTCTCAACTGCTATTCCTCGGGAGGATGACGCAAGTTGCTTGGTGATTGAAAGAAGTCAGAGTCCTGTGACCAACTTCAGTGAGCTCTCTAATCCTTCTTCCGTAGAAGATGAAACTAACAATATAGTGCCCTGTAGTGACCAGACCGATAGTCAAACAGGGAGCTTTCTTTCTTATTGCAAGGAGTCTAACAAGATTATCACTACTAACCAGTCTGAGGATAGAATAAACTGCACAGATGTCAGTGGAATAGGAACAGCTAAAGATTCTGTTTCGTCGTTGGATGAGGAACACGTTACAAGAAAAAGTAGCATGCTTCCTGATCCCAATGTTTCAAAACTTGAAGACAGGCATTCTTCTCAAGTCCAAATCATTGAAGGTACAACAAGCATGAACAAGGGCTCGAATTCTGCCATTCAACAAGGAACTAAATCCACACCATTTGTAAGCAGCTCCGAGGCTGGATTGCCAGTTACTCCTTGCAAAATGGAAATACTCAAGGATGTTCTCGGAAGGAGTGGCCGATCGAAGTCCAGCACCAAGGATCGAGATGATAAGGGATCTGGAGGAGAGGAACTCCGAAATGGCAGCACATCTAAGAAGAGAAATGCAGAGAGACAAGATGTAGATTGTACTGCAAACGGTATTTCGGATAAGGATTTCGAGTATTATGTAAAGTTGATTAGATGGCTAGAATGCGAAGGACACATAGAGAAGAACTTCAGACAAAAATTCTTAACTTGGTATAGCTTGAGAGCGACAACACAAGAAGTTAGGATAGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCTCTTGCCGAGCAACTTGTGGATACGTTTTCGGAATGCATTTCAAGCAAGAAAACATGTGCTGTGCCTTCTGGATTTTGTATGAAGCTTTGGCATTGA
Protein Sequence
- >CsGy1G020160
MHVHLIYEVKPNLTQLKQDGTGTFLTFDFLFCFFLTLMCILVFYFGAALEPLKSSMMSLEKKRNLVYEISDQPHAPELLQSWSRQEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDNQSSPCPSPNISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANINQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIGCWRKQLMKAKETRRVAILCYRISLSKKLLSEDEKFQDVYQIVDEAVKKLEAEVGPLAGVPVGTGRGIVNRLSSGPEVQKLCSLAIDSLDTLLSTKILHHLPSSMIQDTNLVATNFLRFEDVDATYVAVVVGTEDVSCGETIGYRLWHRKAGETDYPIEPTCTLSQPNLRFVVRGLTPSSEYYFKAISFDGTGDLGTCEVQVSTAIPREDDASCLVIERSQSPVTNFSELSNPSSVEDETNNIVPCSDQTDSQTGSFLSYCKESNKIITTNQSEDRINCTDVSGIGTAKDSVSSLDEEHVTRKSSMLPDPNVSKLEDRHSSQVQIIEGTTSMNKGSNSAIQQGTKSTPFVSSSEAGLPVTPCKMEILKDVLGRSGRSKSSTKDRDDKGSGGEELRNGSTSKKRNAERQDVDCTANGISDKDFEYYVKLIRWLECEGHIEKNFRQKFLTWYSLRATTQEVRIVKAFVDNFIEDPSALAEQLVDTFSECISSKKTCAVPSGFCMKLWH