Information report for Ccrd_021204
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Cucumis melo: MELO3C006286
- Daucus carota: DCAR_029504
- Juglans regia: Jr14_02920, Jr05_02450, Jr05_02460
- Lactuca sativa: gene-LSAT_1X84160
- Nicotiana attenuata: A4A49_34832
- Populus trichocarpa: POPTR_014G051500v3
- Sesamum indicum: SIN_1009863
- Solanum lycopersicum: Solyc10g062180.2
- Solanum tuberosum: PGSC0003DMG400003492
- Vitis vinifera: VIT_15s0021g01160
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: A0A103Y128
- EMBL: LEKV01003377
- AlphaFoldDB: A0A103Y128
- OMA: SEMRRPY
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- CDD: cd00590
- STRING: 59895.A0A103Y128
Sequences
CDS Sequence
- >Ccrd_021204
ATGCCTCCGAAATCGGCGAGGAAGTCAGTCGGCCCAGGGAGAAGAGGCGGAAGAGCAAGAGGAACACCGAAGGTGTCGGCGCAGCCTGATCCGGAGGCAGTAGTGGTGCCTGAAGAATCCGTGAAACCGGTTGAGGAGGCACCGGTTGAGGCTAAGGAAGAGGAGGATCCAGCTTTGGGTAAAGAAGAGGAGGTGCCGGTTGGGGTTAAAAAGGCGGACGCCGTGAAGGTCCAAGAGGCCAATGAAGAAAAAGTGGAAAAGGTCGAGGAGAAACCGGTGGCTGATAATGGGATTGATCGTTCAAAGAGGGAAGACAATGATGTGAAAGATTCTGTCGAGGAATATGAAAAAGGGGAACGGTTGGACTTGGAGGATAATGATCCAGAAGAATCCGAACCTGAGGAGTATGTTGGTGAGGATTATGATGAGAAGGAGGTTGTAGAGGATGTTCAAGAAGAGGTACTTGATGTGGAGGAAGAAGTTGAGGATGGGGATGTTGGTGAGGATGAAGAGGGTGATGATATACCTGAGGGAGAAATGGAAGATCCTCCGGAGGAGTTGGAGCCCGAGGAGGAGGAGCATGCTGCTGAAGAGCATGCTGGAATGGCGGATGCAGAGGAGCAAGAGCAGCATGATGTTTTCAAAGAGAGACGTAAACGAAAAGAGTTTGAAATCTTTGTCGGGGGATTGGACAAAGATGCTACTGAGGAGGACCTTAGGAAAGTCTTTAGTGAAGTTGGAGAGGTTTCTGAAGTCAGACTTATGATGAATGCTCAGTCCAAGAAGAACAAGGGATTTGCATTCCTCCGTTTTGCAACTGTGGAGCAGGCAAAACGAGCTTGTGTAGAGCTAAAAAATCCTGTGGTTCATGGGAAACAATGTGGTGTTTCGCCAAGTCAAGACAGTGATACACTATTTTTGGGTAATATATGCAAGACATGGACCCAGGAAGCTCTGAAAGAAAAGTTGAAAAACTATGGAATTGATACCGTGGAGGATTTGACATTGGTAGAAGACAGTAAGACTGATGGAACTAATCGGGGCTTTGCCTTTTTGGAGTTCTCTTCCCGTTCGGATGCTATGGATGCTTTTAAGCGTCTGCAAAAGAGAGATGTGACATTTGGTGTTGATAGGCCAGCTAAGGTTTCTTTTGCAGATTCTTTCATTGACCCTGGTGATGAGATCATGGCCCAGGTTAAGACTGTTTTTGTGGATGGCCTGCCTTCTTCTTGGGATGAGGTTCGAGTGCGGGATCTTCTCAAGAAATACGGGGAGGTGGAGAAAATTGAGCTTGCCCGTAATATGCCTTCTGCCAGAAGAAAGGATTATGGATTCATCACCTTTGGAACACATGATGCAGCTGTGACATGTGCTAAAAGCATTAATAATGTAGAGCTGGGAGAAGGAGAGAACAAGGCTAAAGTGAGGGCCAGATTGTCACGACCACTTCAGAGAGGCAAAGGAAAACACATCTCACGTGGTGATTTTCGACCTGGTCGAGCTGCCTCTGGAGGTTTTAGGGGTCCATGGGCTCGTCCGGTACCACGCAATTTGCCTCCACGCGGTATAAGAAGACTTGGTGGACGTCTACCACCTGTTGTTGATCTTCCTTCACACACCAAGAATAGCCTGAAGCGGGATTATGGTCGACGTGAGGAGCTTCCGCCGAGGAGCAGAGCGATTGCTGGCAGAGCAATTGCTGAGTATGGTCCTCCTAGGTCTACCTCGGAGAGAAACTCATCTTACAGAGACAGTTATCCTACTCGTGGACCTACCTATGCTGATCTACCAAGAGGGTCCTCTCACTCTACATCAAGGAGAGCCTACACAGATGGTGGCTATTCAACAAGGTTTGAGAGACCGCCACCAAGTTATCGCGAGGGTCGCCCTCGTGATTATGATCCTGTTCCTGGGTCAAAGCGTCCATATGCTGCACTGAAATCTTTACCAATCTATAAGGATGATGTTCCACCCCGCTATGCTGATGCCGAAGTACGCCAATCGCGAGTTCGTTTGGATTATGAAATTGGAGGTGGATCTTCACAATATGGAGATGCATATAGCGATAGACTTGGAAGATCAAACATAGGTTATGGTAGTAGCAGGAGTTCAATGTCTGCTCAGGATTCTCATGGTCTTTATAGCAGCCGTCAGGGTCTGGCATACGGTGGAGGATCTTACAGTGGCAGTGATGGTGGTGGTATATACTCATCAAGCTATGGTGGCGATTACATCTCTCGTGGCAGTGATGTTGGCGGAAGCTCTTACTCATCATCGCTGTATTCTGGTCGTAGCTTGGGTGGCAGTGGTTACATGGGTAGTGGAGGCTCTGGATCCTACTATTGA
Protein Sequence
- >Ccrd_021204
MPPKSARKSVGPGRRGGRARGTPKVSAQPDPEAVVVPEESVKPVEEAPVEAKEEEDPALGKEEEVPVGVKKADAVKVQEANEEKVEKVEEKPVADNGIDRSKREDNDVKDSVEEYEKGERLDLEDNDPEESEPEEYVGEDYDEKEVVEDVQEEVLDVEEEVEDGDVGEDEEGDDIPEGEMEDPPEELEPEEEEHAAEEHAGMADAEEQEQHDVFKERRKRKEFEIFVGGLDKDATEEDLRKVFSEVGEVSEVRLMMNAQSKKNKGFAFLRFATVEQAKRACVELKNPVVHGKQCGVSPSQDSDTLFLGNICKTWTQEALKEKLKNYGIDTVEDLTLVEDSKTDGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPSSWDEVRVRDLLKKYGEVEKIELARNMPSARRKDYGFITFGTHDAAVTCAKSINNVELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRAASGGFRGPWARPVPRNLPPRGIRRLGGRLPPVVDLPSHTKNSLKRDYGRREELPPRSRAIAGRAIAEYGPPRSTSERNSSYRDSYPTRGPTYADLPRGSSHSTSRRAYTDGGYSTRFERPPPSYREGRPRDYDPVPGSKRPYAALKSLPIYKDDVPPRYADAEVRQSRVRLDYEIGGGSSQYGDAYSDRLGRSNIGYGSSRSSMSAQDSHGLYSSRQGLAYGGGSYSGSDGGGIYSSSYGGDYISRGSDVGGSSYSSSLYSGRSLGGSGYMGSGGSGSYY