Information report for PGSC0003DMG400003492
Gene Details
|
|
Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Gossypium hirsutum: Gohir.A11G074700
- Juglans regia: Jr05_02450, Jr05_02460, Jr14_02920
- Nicotiana attenuata: A4A49_06618, A4A49_34832
- Prunus persica: PRUPE_2G120600
- Sesamum indicum: SIN_1009863
- Solanum lycopersicum: Solyc10g062180.2, Solyc10g062340.2, Solyc01g088800.3
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: M0ZVC8
- RefSeq: XP_006338915.1
- OMA: SEMRRPY
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: M0ZVC8
- SMR: M0ZVC8
- CDD: cd00590
- eggNOG: ENOG502QRDT
- STRING: 4113.M0ZVC8
- HOGENOM: CLU_356937_0_0_1
Sequences
CDS Sequence
- >PGSC0003DMG400003492
ATGCCTCCAAAATCAGCGAGAAAGACACCTACAGGTTCTGGATCCAAAAGAGGTGGCCGTACATCTCGTGCCACGCCAAAGTCTCTTGAGGAACCAATGGAAGAAGAGAGTAAGGATAACGCGGTGGAGCTCAAACAAGAATTCAAAGTCCCTGAAGAAAAGCTGGAGCCTGAGCAACCGTTGAATGCCAAAGCTGTACAGAACAAGATGCTCAGTTCAGACAAGAAGGTGGATGATGTGAAAGAGTCAGTCGATCAATATGAAAAGGGTGAGCGATTAGATTTGGAGGATAATGACCCTGAATATGACCCTGAAGAGTATGGCACTGTTGATTATGATGAGAGAGGAATTGAAAATGATGATATTCAGGAAGAGGGAGATGAAATAGAGGAAGAACCTGAAGAGGTAGATGTTGATGAAGAGGAAGAGGGTGATATGGTGGAAGAGGATGTTGAAGGTGTTCATGAGGAAATTGAGGGCGATGAAGAAGATGAGCATGCTGGGGAGGAGCATGCTGAGATGGTTCATGCCGCTGAGGAGGAAGAACATCATGAAGTTGTTAAAGAAAGGCGTAAGCGGAAGGAAATTGAAATATTTGTTGGTGGTTTGGACAAGGATGCTACTGAGGATGATCTCAGGAAGGTCTTCAGTAAAGTTGGCGAGGTTACTGAAGTGAGGCTTATGATGAATTCTTATACAAAGAAGAATAAGGGATTTGCATTCCTGCGATTTGCCACTGTGGAACAAGCAAAACGAGCTTGTACTGAGCTGAAAAATCCAGTGATCAATGGAAAACAGTGTGGTGTCTCTCCAAGTCAAGACAATGATACTCTGTTTTTGGGTAACATATGCAAGACCTGGACAAAAGAAGCTTTAAAAGAGAAGCTGAAGCATTATGGTGTTGACAATATTGAGGATTTGACGTTGGTCGAAGACACTAATAATGAGGGAATGAATCGAGGATTTGCTTTCTTGGAGTTCTCTTCACGTTCAGAGGCCATGGATGCTTTTAAGCGGTTACAAAAGAGAGATGTTATGTTTGGTGTTGATAGGCCCGCAAAGGTTTCTTTTGAGGATTCATTCATTGATCCTGGGGATGAAATCATGTCACAGGTCAAAACAGTGTTTGTTGATGGCCTTTCTGCATCCTGGGACGAGGATCGTGTGCGGGAGTTTCTTAAAGAATATGGGAAGATTGAAAAAGTTGAGCTTGCCAGAAATATGCCTTCAGCCAAGAGAAAGGACTTCGGATTTGTCACCTTCGACACCCATGAGGCTGCAGTTACTTGTGCTAAAAGTATTAATAATGAGGAATTGGGTGAAGGAGATAACAAGGTTAAAGTTAGGGCCAGATTATCAAGACCCCTTGAGAGGGGCAGAGGGAAATATGGTGGACGAGGAGATTTGCGACCTTGGCGTATGTCCATGCATGGTCCCCGTGCCCCTTGGGGTCGTATAGTGCCACATAGTCATGCTATTCGAGGGACTAGAGTTAGTACACGCATGCCTCCTGTAGTTGGTCGTGGTTTCAAACGACCTGCAGGATCGAGAGATAGACGGGCAGTGATGGATTTGCCTCCTAGGGGAAGACCCACAGCTCCACCATCTAGCAGGTCATATGACCGAAGACCACCTGTTCCCTCATATCCAAAGAGTAGCTTGAAGAGGGAGTATGGACGGCGAGAGGAAATCCCTCCTCCCAAAAGTAGAGCAGTAGCTGAGTATCCTTCGAGGGTTCATTCTGACAGACGTGCATCCTATAGGGATGAGTATTCTTCCCGTGGGTCTGGTTACCCTGAATTGCCTAGAGGTACTCACTCTGCAGCAAGGAGAGCTTATGTTGATGATGGATATGGGCAACGGTTTGAAAGGCCCCCTCCATCTTACCGCGAGGGACGTGGTCGTGAATATGACTCTGCGTCTGGTTCAAAACGTCCATACACTGCAGTGGATGATGTTCATCCCCGCTATGCTGAGGCAGGAGTGCGGCATTCTCGTGCTCGTTTGGATTACGAACTAGGCAGTGGAAGTGGCTCCCATTATGGAGATGCATATGCTGACAGACTTGGGAGATCAAATCTTGGATATGGTGGCAGTAGGGGCTCCCTTTCAGGTCAAGATTCTCATGGGATGTATAGCAGTCGTCAGGATATGGGTTATGGTGGAGGCTCCTATGGTGGAAGTGATGTAGGTGGAATGTATTCATCCAGCTATGGTAGTGATTACATGTCTCGTGGCAGCGATGTTGACTCGGTTTATTCTAGTCGTGGTATGGGTGGCAGTGGTTATACGGGAAGTGGTGGTTCTGGATCATACTACTAA
Protein Sequence
- >PGSC0003DMG400003492
MPPKSARKTPTGSGSKRGGRTSRATPKSLEEPMEEESKDNAVELKQEFKVPEEKLEPEQPLNAKAVQNKMLSSDKKVDDVKESVDQYEKGERLDLEDNDPEYDPEEYGTVDYDERGIENDDIQEEGDEIEEEPEEVDVDEEEEGDMVEEDVEGVHEEIEGDEEDEHAGEEHAEMVHAAEEEEHHEVVKERRKRKEIEIFVGGLDKDATEDDLRKVFSKVGEVTEVRLMMNSYTKKNKGFAFLRFATVEQAKRACTELKNPVINGKQCGVSPSQDNDTLFLGNICKTWTKEALKEKLKHYGVDNIEDLTLVEDTNNEGMNRGFAFLEFSSRSEAMDAFKRLQKRDVMFGVDRPAKVSFEDSFIDPGDEIMSQVKTVFVDGLSASWDEDRVREFLKEYGKIEKVELARNMPSAKRKDFGFVTFDTHEAAVTCAKSINNEELGEGDNKVKVRARLSRPLERGRGKYGGRGDLRPWRMSMHGPRAPWGRIVPHSHAIRGTRVSTRMPPVVGRGFKRPAGSRDRRAVMDLPPRGRPTAPPSSRSYDRRPPVPSYPKSSLKREYGRREEIPPPKSRAVAEYPSRVHSDRRASYRDEYSSRGSGYPELPRGTHSAARRAYVDDGYGQRFERPPPSYREGRGREYDSASGSKRPYTAVDDVHPRYAEAGVRHSRARLDYELGSGSGSHYGDAYADRLGRSNLGYGGSRGSLSGQDSHGMYSSRQDMGYGGGSYGGSDVGGMYSSSYGSDYMSRGSDVDSVYSSRGMGGSGYTGSGGSGSYY