Information report for Ccrd_009236
Gene Details
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Functional Annotation
- Encodes a U1 small nuclear ribonucleoprotein (snRNP) factor involved in alternative splicing.
Homologous
- Actinidia chinensis: CEY00_Acc25644, CEY00_Acc14670, CEY00_Acc29940
- Capsicum annuum: T459_23621
- Citrullus lanatus: Cla97C06G110750
- Cucumis sativus: CsGy6G007040
- Daucus carota: DCAR_004690
- Juglans regia: Jr10_24680, Jr01_32860, Jr01_32810, Jr01_32840
- Lactuca sativa: gene-LSAT_5X181380, gene-LSAT_8X92021
- Manihot esculenta: MANES_13G040100
- Nicotiana attenuata: A4A49_30278
- Prunus avium: Pav_sc0002181.1_g210.1.mk
- Prunus persica: PRUPE_8G215900
- Sesamum indicum: SIN_1009723
Gene Resources
- Pfam: PF05843
- UniProt: A0A118K7K6
- EMBL: LEKV01000006
- AlphaFoldDB: A0A118K7K6
- OMA: HYLSELM
- InterPro: IPR003107 , IPR011990
- PANTHER: PTHR17204 , PTHR17204:SF5
- SUPFAM: SSF48452
- Gene3D: 1.25.40.10
- STRING: 59895.A0A118K7K6
Sequences
CDS Sequence
- >Ccrd_009236
ATGGGAGATGGTGAAGCAGTTGTTTCTCAAACATCGGCTGTAGATCAGTATTCATCTGCTCCTTATTCTGCATCTGATTATCATGATAGGAGTGGAAATGCTGCTCTTGATTCCAGCACAGGTGCTGAAACTACAGATAGTGGAGATATAACTGCTTTCGTTGGTACTGGTAACATGGATGTAGATCATGCCACTTCTCATGATAATGACCCAGACACTGCTGGTAAATCTGAGGTTACAGATGTTGGTCAACAGGTTCCACTAACTACTGCACAAGATGTTAGGGAGAATCTTCCAAGTGTTATGGACACATCCATGGATTCATCTCATGTTGCCACTTATGATTCTTCTGTGCATGGAATTGATGTTAGTGATGCGAAATCTTTGCCAGCAGTTGGTGCTGAGAATGGGGTTATTAGTTCATACAGTGTTCATACTTCTGCATCTGCACAGCAATTGGTGGATGGTTCTGCATTATCTCCTGAAGAAGACCGATTATGGAACATGGTAAGAGCTAATACACTGGATTTCAATGCTTGGACTGCACTAATAGAGGAGACGGAGAAAACATCAGAGGACAACATTTTGAAAATCCGTAAAGTTTATGATGCCTTTTTAGCTGAGTTTCCTCTGTGTTATGGTTATTGGAAGAAGTATGCTGATCATGAAGCTCGTTTGGGGTCTGTTGATAAAGTTGTGGAGGTCTATGAACGTGCAGTTCAAGGAGTAACATATTCTGTAGATATGTGGCTGCACTACTGTGTTTTTGCCATAAATACCTATGGAGATCCTGACACCATAAGGAGGCTATTTGAACGGGGTTTAGCTTATGTTGGAACTGATTACCTCTCTTTTCCTTTGTGGGATAAGTACATTGAATATGAGTATCACCAGCAGCAGTGGTCGAATCTTGCCATGATCTACACACGGATATTGGAGCATCCTAATCAGCAGTTGGATCGATATTTTAACAGCTTCAGGGAATTAGTTGCTAGTCGTCCTTTATCTGAATTGAGAACCACTGAGGAAGTTGCTACTGCAGCCAAAGCAAAGGAGGAATCAAGGAATCAAGAAAGTGAAGGAGAGGTTAATCCAAATACAGTGGAGCAATCTATTAAACCTCCAAGTGCAAGCTTAACAGAAGCTGAAGATTTGGAGAACTATATTGCCATTAGAGAAGAGCTATATAAGGCAGCCAAAGATTTTGATGCTAAGATCATAGATTTTGAAACAGCCATCAGGAGGCCCTACTATCATTTTCGGCCACTTAATGTTGCAGAGCTTGAAAACTGGCATAACTACATTGATTTCATTGAAGGATGTGATGACTTTAATAAGGTTGTCAAGCTATATGAAAGATGTCTAATTGCTTGTGCAAATTATCCTGAGTACTGGATACGCTACATTTTGTGCATGGAAGCCAGTAGAAATGTGGAACTTGCTGAAAATGCACTTGCCCGTGCTACCCAGAGGCATCCGGAGATTCACCTTTTTGCTGCTCGATTTAAAGAGCACAGTGGAGACATTGCAGGAGCTCGATCATCTTATCAACTCGTCCACACTGAAATTTCTCCGGGTCTTCTAGAAGCAATTATCAAGCATGCTAACATGGAATATCGGCTGGGAAATCTGGAAGATGCTTGTTCTTTGTATGAGCAGACTATTGCAATCGAGAAAGGAAAAGAGCACTCACAGACATTGCCCCTTTTGTTCGCACAGTATTCTCGATTTCTGTACTTGGTTTTGGGAAAGGTAGAGAAAGCAAGGGAGGTTCTAGATCAAGCACTTGAGAATAACCAACTCTCAAAACCACTTTTAGAGGCTTTAATTCATATAGAATCAATTCAATCGCTACCAAAGCGAACTGATCATTTAGACTCACTGGTGGAAAAGTTCATATCCCCTGGACCTGATAATTCAAATGCTGCAAGTCGTGTTGAGAGAGAAGAGCTATCTAATATTTTCTTGGAGTTTCTAGATCTTTTTGGGGATGCAAAGTCCATCAAGAAGGCTGATGTTCGGCATGCCAAGCTTTTCTTACCTCACAAGAGTTCTTCAGAGTCCAAGAAGCGGCAACTGGAGGGTTATTTAGTCTCTGATAGAGCCAAGCTTGCAAAAGGTGTGGTTTCATCTGCTTCATCAGTCACAGGCACCTATCAGGCCACACAGAACCAGTGGCCGGCAGGTTATGGTGCTGCTTATGGCACATACAATGCTTATGGAAGTGGCTACGCCCAACCGCAAGCCCCGGCATCTGTCCCACAAGCCGCTGCTTACACTTCTTTTCCTGCTTCTTACCCGGTCCAGCAGGCCGTCCCACAGCAAGTTTCAACAATGACGCCTGCACAGCAGCCTGCTGCGGTCGCCCCTGCATATTATGGCACCTACTATTGA
Protein Sequence
- >Ccrd_009236
MGDGEAVVSQTSAVDQYSSAPYSASDYHDRSGNAALDSSTGAETTDSGDITAFVGTGNMDVDHATSHDNDPDTAGKSEVTDVGQQVPLTTAQDVRENLPSVMDTSMDSSHVATYDSSVHGIDVSDAKSLPAVGAENGVISSYSVHTSASAQQLVDGSALSPEEDRLWNMVRANTLDFNAWTALIEETEKTSEDNILKIRKVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCVFAINTYGDPDTIRRLFERGLAYVGTDYLSFPLWDKYIEYEYHQQQWSNLAMIYTRILEHPNQQLDRYFNSFRELVASRPLSELRTTEEVATAAKAKEESRNQESEGEVNPNTVEQSIKPPSASLTEAEDLENYIAIREELYKAAKDFDAKIIDFETAIRRPYYHFRPLNVAELENWHNYIDFIEGCDDFNKVVKLYERCLIACANYPEYWIRYILCMEASRNVELAENALARATQRHPEIHLFAARFKEHSGDIAGARSSYQLVHTEISPGLLEAIIKHANMEYRLGNLEDACSLYEQTIAIEKGKEHSQTLPLLFAQYSRFLYLVLGKVEKAREVLDQALENNQLSKPLLEALIHIESIQSLPKRTDHLDSLVEKFISPGPDNSNAASRVEREELSNIFLEFLDLFGDAKSIKKADVRHAKLFLPHKSSSESKKRQLEGYLVSDRAKLAKGVVSSASSVTGTYQATQNQWPAGYGAAYGTYNAYGSGYAQPQAPASVPQAAAYTSFPASYPVQQAVPQQVSTMTPAQQPAAVAPAYYGTYY