Information report for Bra040020
Gene Details
Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Arabidopsis thaliana: AT3G07650.4, AT3G07650.3, AT3G07650.2, AT3G07650.1
- Brassica napus: GSBRNA2T00018514001, BnaA01G0428500ZS, GSBRNA2T00038967001, BnaC05G0514700ZS, GSBRNA2T00059507001, BnaA05G0456200ZS
- Brassica oleracea: XP_013620212.1, XP_013620144.1, XP_013620050.1, XP_013619988.1, Bo1g147240, XP_013586534.1, XP_013586533.1, Bo5g141290
Sequences
gDNA Sequence
- >Bra040020
CAGTAGCTTCTGGTTGGAGTGAGTGGGTCATAGTCATAAGCTTCACCAGCTTTGATAAATCTCCCCTTTACACGCCTTCTCACATCAGCTCTTGCTTTCCGAGAAGCATACCTCACTGTCTTATCAAACCTATAGCAAATAAAAAAAATCAACAGTGTCTCATTGTGGCATGCATTGGATTTTGCAATAGAGAGTACGGTGCACTTACTTGCGAGCCTTCTTCTTTTCCTTGTAACGCATAACCGCGTTATTACGAGTAACTGAATGTGAGAAAGCATTATTATCCTGTGATGTTTGAGGATACCATGGTGGATCCCCCAAGAGCTGCATGGAAGATGATGCACCACATTCTTGAAAATCTCCAGCACAACTTTCTCCGGTGACTCCAGAGAAAGATATGTTGGAATGTGCTGGCTTCGATGTGTAGCAAATTATTGGCTCGGTTTTAGAACTCATGAATGAATCATTGCTCTCAGCTGGTTGCACTGAGTTCCCTCCCTGGATTAAAATTAAAACAAAATCATCATTAGAATCACATAAAGATGCAAAAAGAAAATGCAAAAAAGATATATACCTCAGGAGCTGCTTGATGTTTCTGGAAAAGACTATCGATTCCACATTGTCCAAAGAGATGTCCTGAGGAGTTAAAGGCAGTACCGAAGAGCTCTTCATAGTTCTCAAGTGCCAAGTCAACTTCATCCATACCCAAGTTATCATAAAAGTCATCTTCACACACTCCAATATCCTTCAAACCATAAACACACAATAAACTCGAATTTAGTAACAAGATGATAACACCATGGATGCAACACAAGTAAGATGTTGTTTTAGTTTTTTTTTCACAGAAATTAAAAAAAGTTATATATTCAATTTTGTTCTGATTTGACTATCTAAATGAGCATTTATAGTCTTTTATTTTAATTTAATTAGAGAAAAAAGGTAAATCCGTGGAAAAGAATTGATTGAATTGATAAAATTACATTTATTTTTCAAGGAAATTTTATTATATAATGATACTTAATTTGAAACGGAGGGAGTATTACCTTAGCAAATGGTGAGTTTGCATGTGCTGCATAACTGGTTTCAAGCCTTGAAGAGGAGCCAACGATGACATCTTTCTTATCCTCATTACAGTTTTGGTTGGTCTGACCATCATCGTCTATATTCATCATACCAATTTCTTGTTCACAAACGGATTGTCCAGCTAAGTCCGAGCAAAAAGACCATATAGAGGCGAGCTCCGAGCTTGAAGGGCAACCAGAATAGCAACTTATGCTTTGTCTCTTGTGATGACTTGACAAAGAATTAGAATTGTTGTTGTTGTTGTGGCCTGACCAGTCACAGTTTTGACAGAGTGAAACCCTTTCTTCAACACACCTAACTGTAGCAGGATGTGCATTGCATCTCTCGCAGACAAGTGTCCTAGAATGTCGTTTGGACAATGCATTAGCTGAATGAATACTCCGGTCACAGGAGAGGCAGAGACACGCAGCATCGGATCGACAGTACACCATTGATCTTTGTTCACCACAGAAGTCACACATGTAACCCAT
CDS Sequence
- >Bra040020
ATGGGTTACATGTGTGACTTCTGTGGTGAACAAAGATCAATGGTGTACTGTCGATCCGATGCTGCGTGTCTCTGCCTCTCCTGTGACCGGAGTATTCATTCAGCTAATGCATTGTCCAAACGACATTCTAGGACACTTGTCTGCGAGAGATGCAATGCACATCCTGCTACAGTTAGGTGTGTTGAAGAAAGGGTTTCACTCTGTCAAAACTGTGACTGGTCAGGCCACAACAACAACAACAATTCTAATTCTTTGTCAAGTCATCACAAGAGACAAAGCATAAGTTGCTATTCTGGTTGCCCTTCAAGCTCGGAGCTCGCCTCTATATGGTCTTTTTGCTCGGACTTAGCTGGACAATCCGTTTGTGAACAAGAAATTGGTATGATGAATATAGACGATGATGGTCAGACCAACCAAAACTGTAATGAGGATAAGAAAGATGTCATCGTTGGCTCCTCTTCAAGGCTTGAAACCAGTTATGCAGCACATGCAAACTCACCATTTGCTAAGGATATTGGAGTGTGTGAAGATGACTTTTATGATAACTTGGGTATGGATGAAGTTGACTTGGCACTTGAGAACTATGAAGAGCTCTTCGGTACTGCCTTTAACTCCTCAGGACATCTCTTTGGACAATGTGGAATCGATAGTCTTTTCCAGAAACATCAAGCAGCTCCTGAGGGAGGGAACTCAGTGCAACCAGCTGAGAGCAATGATTCATTCATGAGTTCTAAAACCGAGCCAATAATTTGCTACACATCGAAGCCAGCACATTCCAACATATCTTTCTCTGGAGTCACCGGAGAAAGTTGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCATGCAGCTCTTGGGGGATCCACCATGGTATCCTCAAACATCACAGGATAATAATGCTTTCTCACATTCAGTTACTCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGACAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTATCAAAGCTGGTGAAGCTTATGACTATGACCCACTCACTCCAACCAGAAGCTACTGA
Protein Sequence
- >Bra040020
MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSIHSANALSKRHSRTLVCERCNAHPATVRCVEERVSLCQNCDWSGHNNNNNSNSLSSHHKRQSISCYSGCPSSSELASIWSFCSDLAGQSVCEQEIGMMNIDDDGQTNQNCNEDKKDVIVGSSSRLETSYAAHANSPFAKDIGVCEDDFYDNLGMDEVDLALENYEELFGTAFNSSGHLFGQCGIDSLFQKHQAAPEGGNSVQPAESNDSFMSSKTEPIICYTSKPAHSNISFSGVTGESCAGDFQECGASSSMQLLGDPPWYPQTSQDNNAFSHSVTRNNAVMRYKEKKKARKFDKTVRYASRKARADVRRRVKGRFIKAGEAYDYDPLTPTRSY