Information report for BnaA01G0428500ZS
Gene Details
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Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Arabidopsis thaliana: AT3G07650.4, AT3G07650.3, AT3G07650.2, AT3G07650.1
- Brassica oleracea: XP_013620212.1, XP_013620144.1, XP_013620050.1, XP_013619988.1, Bo1g147240, XP_013586534.1, XP_013586533.1, Bo5g141290
- Brassica rapa: XP_009124257.1, XP_009124250.1, XP_009124240.1, XP_009124232.1, Bra040020
Gene Resources
- Pfam: PF06203 PF00643
- UniProt: A0A078G6N0
- RefSeq: XP_013724116.1 , XP_013724117.1 , XP_013724118.1
- EMBL: LK032128
- AlphaFoldDB: A0A078G6N0
- KEGG: bna:106427941
- OMA: PECSNVA
- InterPro: IPR000315 , IPR010402 , IPR049808
- PANTHER: PTHR31717 , PTHR31717:SF80
- PROSITE: PS50119 , PS51017
- OrthoDB: A0A078G6N0
- SMR: A0A078G6N0
- CDD: cd19821
- STRING: 3708.A0A078G6N0
Sequences
gDNA Sequence
- >BnaA01G0428500ZS
CAGTAGCTTCTGGTTGGAGTGAGTGGGTCATAGTCATAAGCTTCACCAGCTTTGATAAATCTCCCCTTTACACGCCTTCTCACATCAGCTCTTGCTTTCCGAGAAGCATACCTCACTGTCTTATCAAACCTATAGCAAATAAAAAAAATCAACAGTGTCTCATTGTGGCATGCATTGGATTTTGCAATAGAGAGTACGGTGCACTTACTTGCGAGCCTTCTTCTTTTCCTTGTAACGCATAACCGCGTTATTACGAGTAACTGAATGTGAGAAAGCATTATTATCCTGTGATGTTTGAGGATACCATGGTGGATCCCCCAAGAGCTGCATGGAAGATGATGCACCACATTCTTGAAAATCTCCAGCACAACTTTCTCCGGTGACTCCAGAGAAAGATATGTTGGAATGTGCTGGCTTCGATGTGTAGCAAATTATTGGCTCGGTTTTAGAACTCATGAATGAATCATTGCTCTCAGCTGGTTGCACTGAGTTCCCTCCCTGGATTAAAATTAAAACAAAATCATCATTAGAATCACATAAAGATGCAAAAAGAAAATGCAAAAAAGATATATACCTCAGGAGCTGCTTGATGTTTCTGGAAAAGACTATCGATTCCACATTGTCCAAAGAGATGTCCTGAGGAGTTAAAGGCAGTACCGAAGAGCTCTTCATAGTTCTCAAGTGCCAAGTCAACTTCATCCATACCCAAGTTATCATAAAAGTCATCTTCACACACTCCAATATCCTTCAAACCATAAACACACAATAAACTCGAATTTAGTAACAAGATGATAAAACCATGGATGCCACACAAATGTTGTTTTAGTTTTTTTTTTCACAGAAATTAAAAATAAGGTTATATATTCAATTTTGTTCTGATTTGACTATCTAAACGAGCATTTATAGTTTTTTATTTTAATTTAATTAGAGAAAAAGATAAATTCATGGAAAAGAACTGATTGAATTGATAAAATTACATTTATTTTTCAAGGAAATTTTATTCTATAATGATACTTAATTTGAAACGGATGGAATATTACCTTAGCAAATGATGAGTTTGCATGTGCTGCATAACTGGTTTCAAGCCTTGAAGAGGAGCCAACGATGACATCTTTCTTAGCCTCATTACAGTTTTGGTTGGTCTGACCATCATCGTCTATATTCATCATACCCATTTCTTGTTCACAAACGGATCCAGATAAGTCTGAACAAAAAGACCAGAGAGAGGCGAGCTCCGAGCTTGAAGGGCAACCAGAATAGCAACTTATGCTTTGTCTCTTGTGATGACTCGACAAAGAATTAGAATTGTTGTTGTTGTTGTTGTGGCCTGACCAGTCACAGTTTTGACAGAGTGAAACCCTTTCTTCAACACACCTAACTGTAGCAGGCTGTGCATTGCATCTCTCGCAGACAAGTGTCCTAGAATGTCGTTTGGACAATGCATTAGCTGAATGAATACTCCGGTCACAGGAGAGGCAGAGACACGCAGCATCGGATCGACAGTACACCATTGATCTTTGTTCACCACAGAAGTCACACATGTAACCCAT
CDS Sequence
- >BnaA01G0428500ZS
ATGGGTTACATGTGTGACTTCTGTGGTGAACAAAGATCAATGGTGTACTGTCGATCCGATGCTGCGTGTCTCTGCCTCTCCTGTGACCGGAGTATTCATTCAGCTAATGCATTGTCCAAACGACATTCTAGGACACTTGTCTGCGAGAGATGCAATGCACAGCCTGCTACAGTTAGGTGTGTTGAAGAAAGGGTTTCACTCTGTCAAAACTGTGACTGGTCAGGCCACAACAACAACAACAACAATTCTAATTCTTTGTCGAGTCATCACAAGAGACAAAGCATAAGTTGCTATTCTGGTTGCCCTTCAAGCTCGGAGCTCGCCTCTCTCTGGTCTTTTTGTTCAGACTTATCTGGATCCGTTTGTGAACAAGAAATGGGTATGATGAATATAGACGATGATGGTCAGACCAACCAAAACTGTAATGAGGCTAAGAAAGATGTCATCGTTGGCTCCTCTTCAAGGCTTGAAACCAGTTATGCAGCACATGCAAACTCATCATTTGCTAAGGATATTGGAGTGTGTGAAGATGACTTTTATGATAACTTGGGTATGGATGAAGTTGACTTGGCACTTGAGAACTATGAAGAGCTCTTCGGTACTGCCTTTAACTCCTCAGGACATCTCTTTGGACAATGTGGAATCGATAGTCTTTTCCAGAAACATCAAGCAGCTCCTGAGGGAGGGAACTCAGTGCAACCAGCTGAGAGCAATGATTCATTCATGAGTTCTAAAACCGAGCCAATAATTTGCTACACATCGAAGCCAGCACATTCCAACATATCTTTCTCTGGAGTCACCGGAGAAAGTTGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCATGCAGCTCTTGGGGGATCCACCATGGTATCCTCAAACATCACAGGATAATAATGCTTTCTCACATTCAGTTACTCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGACAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTATCAAAGCTGGTGAAGCTTATGACTATGACCCACTCACTCCAACCAGAAGCTACTGA
Protein Sequence
- >BnaA01G0428500ZS
MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSIHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNNNNNSNSLSSHHKRQSISCYSGCPSSSELASLWSFCSDLSGSVCEQEMGMMNIDDDGQTNQNCNEAKKDVIVGSSSRLETSYAAHANSSFAKDIGVCEDDFYDNLGMDEVDLALENYEELFGTAFNSSGHLFGQCGIDSLFQKHQAAPEGGNSVQPAESNDSFMSSKTEPIICYTSKPAHSNISFSGVTGESCAGDFQECGASSSMQLLGDPPWYPQTSQDNNAFSHSVTRNNAVMRYKEKKKARKFDKTVRYASRKARADVRRRVKGRFIKAGEAYDYDPLTPTRSY