Information report for Bo9g014270
Gene Details
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Functional Annotation
- Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development.
Homologous
- Brassica napus: BnaC09G0063100ZS, GSBRNA2T00146106001, GSBRNA2T00094727001, BnaA09G0073100ZS, BnaC07G0373800ZS
- Brassica rapa: XP_009141450.1, XP_009141444.1, XP_009141455.1, XP_009141461.1, Bra026507, XP_009136371.1, XP_009136372.1
- Raphanus raphanistrum: RrC5510_p4
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A0D3E1M4
- AlphaFoldDB: A0A0D3E1M4
- OMA: DEHRTGI
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 109376.A0A0D3E1M4
- HOGENOM: CLU_053053_0_1_1
Sequences
gDNA Sequence
- >Bo9g014270
TAATCAACCTTGGTGATCGTTGGATCGTTTTGAAGATTAGGCTGAGCAAGCTGGAGATGGTAACTAAGATCAATCTCTGAAGGAAGCGTAGGGAGCTGAAGAACACTGCTTTGTTGCTGCTGATGATCATTATAGTACTGAACATGCTCTAGAAACTGTTGATACTCCATTGGTTTGGTCTCTATCTCAGCTTGCTGAAACTCAATCCCCGTACGATGCTCATCATGAAGCTGCAATATAGCCATACGGCATGGATAGTAAAATATGTCATTTAATCCAAAATGTGCAAACAAATTAACATTCTCTAGCTAGTAACCAAACTTACCCAACGGTACATATTGTTGTTATCGTCTTCTAGCATCCGCCTCTACAATATGCATAAACATGATATTGAATATTAATTAAACCCGCCATATGACTATCATTTATAGAAGAAATATAAGGGAAAAAAAAGTGAATCGAGAAGCGACCTTTCTGCTAAGATTCCCCAACTGTTGCTGCAGCAACTCCTTCTTCAATAAATTAGCATTAGAGATAGAAAAAGGGAGAAATCAAACAAACTGTAACGATATATAGTTTAAAGAGAATACATTTTTGTAAGCATATATGACGCTACCTTACGCTCACGGACTTTATGGACAGAATGTTCGAGCTGTTGCTCTAGCCCATCGAGCTCGTGTGGAGGAATGGAGGCTAAGTCATGTCCATGGTATGGACGCAGACGGAGCTCAAGCTTACATGTCTCCCTTCTTAGTATTTCAATCTCATGGCGCAGGTCATCCTATATATATAAACGAAAACTATTTTTGTTGTTGTTTTGAATTGGTAAGACCAAAGTATATATGTTATACCCGGTCGTCATTAAGGTCAGGAAGTTGCAATCCTTCTTTTGTCAAATATCTGTCAATGAGCTGAGGCATACTGTTCAATATTGGTAATTATGAAAGGTGATCAAATTAGTATCTTCAATCTCACAACGTCAAGACTAATTGAATAATCAATGGAGGAAAATAAAACTCAAAAAAAACGAATTTAATTCTCTAGATTATGATCTATATATACTTTGACAAACAAAAGGATGTCCAAAAGAACTGATACAAAAAATTAAAATGAAAAGGTGTTTCCCCTTCTTTATTTTGTTAGAAAACTTAGAACTAATAATATAGCATACCTTTATTCTCATATTATAAGGAGAACGATGCATGTGAATAAGTTTATCTTCTCGTTTGACTTATATCTACAACGATCTAATTAACACAGCATTAAAATTAAATATTCTTAAATCGAATAATTAAAAAAGACTTATATATTTCTAAAAAAAAGACTTATATATAGGTTGAAAAGGGGTTATACGCGGTGTTCTACAAACACAACTTGAAATCTTTTTATGAGAAAGTTGTTCAACAAATGTCAAATTTTTGTAGATCTCTTTGCTCACTGGTGAGGAAAATATAGATTATAACCCATATGTAGTTATAAACCAATAATAAAATTATATATACAAATAAAATAAATAATAAAAATATAGCATCAGAGAGATTCTTAACTTCTGGGCCAAATTAAATTCTTAAAACATTATTCATGGTACCTGCTACTTCAGAAACTAATGATGAAAACTGTTTCTTCACTTCACAAGCACGAAGAGCTGTATGTCTCCCGTGCTCATTAATTAGTTCAGTTACAGTTGACAGAAAAAGATACTAATAGATCACAAGTATGTATAGATCTCTGAAACCCTAATTTGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAAGAAGAAGGAGCTAACTTAGAGTGTTCGGAGCAGTACTGGGTGAGCTTTCCGGTGGCAGAGAAGACGATGAGACCGATGTGAGCATCACAGAGAACAGAGAGCTCACGAGTCTTCTTGATAAGACCATTTCTTCTCTTGGAGAAGGTCACTTGCCTCGATGTCTTATTCTCTATCTTCTTTATCTCGATCTTCCCTCTTCCCATCTCTCTCCTCTTCCTCTTATTTCCCCCGTCCTCTTCCTCCTGATTCAATATATATATGTGATGTGGAAGTTAGATCAACTAAGAATAAATCTCTAGTCAACTAAAAAACGAAGTGTTTGCAAAAAAAAAAAAAAAACTACAAAACTAACAACAAATAAGAATCTAAAGCCCTAGAGGTAATTACAGGATTCAT
CDS Sequence
- >Bo9g014270
ATGAATCCTGAGGAAGAGGACGGGGGAAATAAGAGGAAGAGGAGAGAGATGGGAAGAGGGAAGATCGAGATAAAGAAGATAGAGAATAAGACATCGAGGCAAGTGACCTTCTCCAAGAGAAGAAATGGTCTTATCAAGAAGACTCGTGAGCTCTCTGTTCTCTGTGATGCTCACATCGGTCTCATCGTCTTCTCTGCCACCGGAAAGCTCACCCAGTACTGCTCCGAACACTCTAATATGCCTCAGCTCATTGACAGATATTTGACAAAAGAAGGATTGCAACTTCCTGACCTTAATGACGACCGGGATGACCTGCGCCATGAGATTGAAATACTAAGAAGGGAGACATGTAAGCTTGAGCTCCGTCTGCGTCCATACCATGGACATGACTTAGCCTCCATTCCTCCACACGAGCTCGATGGGCTAGAGCAACAGCTCGAACATTCTGTCCATAAAGTCCGTGAGCGTAAGAAGGAGTTGCTGCAGCAACAGTTGGGGAATCTTAGCAGAAAGAGGCGGATGCTAGAAGACGATAACAACAATATGTACCGTTGGCTTCATGATGAGCATCGTACGGGGATTGAGTTTCAGCAAGCTGAGATAGAGACCAAACCAATGGAGTATCAACAGTTTCTAGAGCATGTTCAGTACTATAATGATCATCAGCAGCAACAAAGCAGTGTTCTTCAGCTCCCTACGCTTCCTTCAGAGATTGATCTTAGTTACCATCTCCAGCTTGCTCAGCCTAATCTTCAAAACGATCCAACGATCACCAAGGTTGATTAA
Protein Sequence
- >Bo9g014270
MNPEEEDGGNKRKRREMGRGKIEIKKIENKTSRQVTFSKRRNGLIKKTRELSVLCDAHIGLIVFSATGKLTQYCSEHSNMPQLIDRYLTKEGLQLPDLNDDRDDLRHEIEILRRETCKLELRLRPYHGHDLASIPPHELDGLEQQLEHSVHKVRERKKELLQQQLGNLSRKRRMLEDDNNNMYRWLHDEHRTGIEFQQAEIETKPMEYQQFLEHVQYYNDHQQQQSSVLQLPTLPSEIDLSYHLQLAQPNLQNDPTITKVD