Information report for BnaC09G0063100ZS
Gene Details
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Functional Annotation
- Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development.
Homologous
- Brassica oleracea: XP_013610042.1, XP_013610041.1, Bo9g014270, XP_013610043.1, XP_013610044.1, XP_013596700.1, XP_013596702.1, Bo7g097810
- Brassica rapa: XP_009141450.1, XP_009141444.1, XP_009141455.1, Bra026507, XP_009141461.1, XP_009136371.1, XP_009136373.1, Bra013028
- Raphanus raphanistrum: RrC5510_p4
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A816IPY9
- EMBL: HG994373
- AlphaFoldDB: A0A816IPY9
- OMA: DEHRTGI
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A816IPY9
- CDD: cd00265
Sequences
gDNA Sequence
- >BnaC09G0063100ZS
TAATCAACCTTGGTGATCGTTGGATCGTTTTGAAAATTAGGCTGAGCAAGCTGGAGATGGTAACTAAGATCAATCTCTGAAGGAAGCGTAGGGAGCTGAAGAACACTGCTTTGTTGCTGATGATGATCATTATAGTACTGAACATGCTCTAGAAACTGTTGATACTCCATTGGTTTGGTCTCTATCTCAGCTTGCTGAAACTCAATCCCCGTACGATGCTCATCATGAAGCTGCAATATAGCCATACGGCATGGATAGTAAAATATGTCATTTAATCCAAAATGTGCAAACAAATTAACATTCTCTAGCTAGTAACCAAACTTACCCAACGGTACATATTGTTGTTATCGTCTTCTAGCATCCGCCTCTACAATATGCATAAACATGATATTGAATATTAATTAAACCCGCCATATGACTATCATTTATAGAAGAAATATAAGGGAAAAAAAAGTGAATCGAGAAGCGACCTTTCTGCTAAGATTCCCCAACTGTTGCTGCAGCAACTCCTTCTTCAATAAATTAGCATTAGAGATAGAAAAAGGGAGAAATCAAACAAACTGTAACGATATATAGTTTAAAGAGAATACATTTTTGTAAGCATATATGACGCTACCTTACGCTCACGGACTTTATGGACAGAATGTTCGAGCTGATGCTCTAGCCCATCGAGCTCGTGTGGAGGAATGGAGGCTAAGTCATGTCCATGGTATGGACGCAGACGGAGCTCAAGCTTACATGTCTCCCTTCTTAGTATTTCAATCTCATGGCGCAGGTCATCCTATATATATAAACGAAAACTATTTTTGTTGTTGTTTTGAATTGGTAAGACCAAAGTATATATGTTATACCCGGTCGTCATTAAGGTCAGGAAGTTGCAATCCTTCTTTTGTCAAATATCTGTCAATGAGCTGAGGCATACTGTTCAATATTGGTAATTATGAAAGGTGATCAAATTAGTATCTTCAATCTCACAACGTCAAGACTAATTGGATAATCAATGGAGGAAAACAAAACTCAAAAAAAACGAATTTAATTCTCTAGATTATGATCTATATATACTTTGACAAACAAAAGGATGTCCAAAAGAACTGATACAAAAAATTAAAATGAAAAGGTGTTTCCCCTTCTTTATTTTGTTAGAAAACTTAGAACTAATAATATAGCATACCTTTATTCTCATATTATAAGGAGAACGATGCATGTGAATAAGTTTATCTTCTCGTTTGACTTATATCTACAACGATCTAATTAACACAGCATTAAAATTAAATATTCTTAAATCGAATAATTAAAAAAGACTTATATATTTCTAAAAAAAAGACTTATATATAGGTTGAAAAGGGGTTATACGCGGTGTTCTACAAACACAACTTGAAATCTTTTTATGAGAAAGTTGTTCAACAAATGTCAAATTTTTGTAGATCTCTTTGCTCACTGGTGAGGAAAATATAGATTATAACCCATATGTAGTTATAAACCAATAATAAAATTATATATACAAATAAAATAAATAATAAAAATATAGCATCAGAGAGATTCTTAACTTCTGGGCCAAATTAAATTCTTAAAACATTATTCATGGTACCTGCTACTTCAGAAACTAATGATGAAAACTGTTTCTTCACTTCACAAGCACGAAGAGCTGTATGTCTCCCGTGCTCATTAATTAGTTCAGTTACAGTTGACAGAAAAAGATACTAATAGATCACAAGTATGTATAGATCTCTGAAACCCTAATTTGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAAGAAGAAGGAGCTAACTTAGAGTGTTCGGAGCAGTACTGGGTGAGCTTTCCGGTGGCAGAGAAGACGATGAGACCGATGTGAGCATCACAGAGAATAGAGAGCTCACGAGTCTTCTTGATAAGACCATTTCTTCTCTTGGAGAAGGTCACTTGCCTCGATGTCTTATTCTCTATCTTCTTTATCTCGATCTTCCCTCTTCCCAT
CDS Sequence
- >BnaC09G0063100ZS
ATGGGAAGAGGGAAGATCGAGATAAAGAAGATAGAGAATAAGACATCGAGGCAAGTGACCTTCTCCAAGAGAAGAAATGGTCTTATCAAGAAGACTCGTGAGCTCTCTATTCTCTGTGATGCTCACATCGGTCTCATCGTCTTCTCTGCCACCGGAAAGCTCACCCAGTACTGCTCCGAACACTCTAATATGCCTCAGCTCATTGACAGATATTTGACAAAAGAAGGATTGCAACTTCCTGACCTTAATGACGACCGGGATGACCTGCGCCATGAGATTGAAATACTAAGAAGGGAGACATGTAAGCTTGAGCTCCGTCTGCGTCCATACCATGGACATGACTTAGCCTCCATTCCTCCACACGAGCTCGATGGGCTAGAGCATCAGCTCGAACATTCTGTCCATAAAGTCCGTGAGCGTAAGAAGGAGTTGCTGCAGCAACAGTTGGGGAATCTTAGCAGAAAGAGGCGGATGCTAGAAGACGATAACAACAATATGTACCGTTGGCTTCATGATGAGCATCGTACGGGGATTGAGTTTCAGCAAGCTGAGATAGAGACCAAACCAATGGAGTATCAACAGTTTCTAGAGCATGTTCAGTACTATAATGATCATCATCAGCAACAAAGCAGTGTTCTTCAGCTCCCTACGCTTCCTTCAGAGATTGATCTTAGTTACCATCTCCAGCTTGCTCAGCCTAATTTTCAAAACGATCCAACGATCACCAAGGTTGATTAA
Protein Sequence
- >BnaC09G0063100ZS
MGRGKIEIKKIENKTSRQVTFSKRRNGLIKKTRELSILCDAHIGLIVFSATGKLTQYCSEHSNMPQLIDRYLTKEGLQLPDLNDDRDDLRHEIEILRRETCKLELRLRPYHGHDLASIPPHELDGLEHQLEHSVHKVRERKKELLQQQLGNLSRKRRMLEDDNNNMYRWLHDEHRTGIEFQQAEIETKPMEYQQFLEHVQYYNDHHQQQSSVLQLPTLPSEIDLSYHLQLAQPNFQNDPTITKVD