Information report for Bo3g019340
Gene Details
|
|
Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Actinidia chinensis: CEY00_Acc12139, CEY00_Acc13484
- Brassica napus: BnaC03G0129200ZS, BnaA03G0112400ZS, BnaA06G0406800ZS, BnaC02G0145400ZS, BnaA02G0118200ZS, BnaC03G0774400ZS, BnaA08G0156000ZS
- Brassica rapa: Bra020445, Bra006824
- Juglans regia: Jr08_07460, Jr08_07470
- Medicago truncatula: Medtr4g127880
Gene Resources
- Pfam: PF00041 PF07227
- UniProt: A0A0D3B304
- RefSeq: XP_013629072.1
- AlphaFoldDB: A0A0D3B304
- OMA: CQNFDEN
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF7
- eggNOG: ENOG502QR8D
- STRING: 109376.A0A0D3B304
- HOGENOM: CLU_016873_0_0_1
Sequences
gDNA Sequence
- >Bo3g019340
TGCAAGCTGCTTCGGTAATAAGCTTTTCTTTGTTCGATGTTGTTGTTGGAAGTTTTTCATTCGGTGAACAAAGAACCAATCCTCATTTTATTTTATTTTATTTTATTTTTATACACTTATTTTTTAATATTCTAAAATTCTCAATGTTTTATTCTTGTATGGCTCTTTTATAGAGCTTGAAGACCGAGTACTCCTGGATTCTATGTCTATACGTTCATTTTATACATGTTCTTTAAGAGAATGAGAGCTTCATGGTTTTGCCTTTTGGCTGTTTAAATATTTTAATTTTGGAAAAAAATAATTTGAAAAATAAAAATCTGAGCTTTATCGATCTCTTTTGTTCTTCCGGATCATGGGTACTAATACATTTTTGATCCCTTGTTTTTTTCATAGAACTTTGTTGTGATGGGTTCTTAACTTTACATTATTTAATTCTTTGTCCGAAAACTGATCTGCAGCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAACGTACGAGTTCTTCTTCATGTCGACGTGAACGTCTTTTGTCTTCTCACTGTTCTAGTTTCATGCGTCTATTTCGTGAAGCTTTTAAGAGCATGTTTCCTACAGGTCTCTTAGGTCAGGTCCGTATCTTATATTTAGCTAATAGACCCTAAGACACCTGCAATAAACATGCTCTTAGGTCGCTAACACGACGTAGTTTTCATTGACAAAACTGTTTCATATATGAACATCAACGCTTTATTTCTCGCATTGGATTCGTCGTTCGTCGTCATTGTTGAAATTTTTGGTTCATGGGTTGTTGAGACTTATCGTTTTCGTTGACAAAGCTTAAAACTTTTGTTCTTACCACACTTGTTCTAGGGTTAAAGTATTGTGCTTTTGCTTTTGCCTTTGCAGGTGTCGTGTGCACCGAGTTTCCTAAAAAGAAGGGTTTGAGTGTAAGCGAGAGAAGAGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATAATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGAAAGTACACTGGCCTAGCCAAACCAAAACTCATTGAAAACCTACTCAATCTCGTCTCTCGTCCTCTCGGTGAAACCTCGTGTCCTAACCGTAAAAGCTCGAGGAAGAAACAGAAGACGACTACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCAGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGAGAATAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTGAAGGAAGATGGGTATGGGATTGGGTATAATGATGGTAGTTTTCACTGCGTGTTTTGCGGCAAAGATAGTGATCTTCTCGGGTAAGATTCTTTTGGTATAGATTTGTTGGGAGAAGGTAATGTAATAATGATGTGTGTGGACTTACAGATGCTGGAGGAAGCAAGTGAAGGTTGCGAAAGAGACTGGGCGTGTGGATGTACTTTGTTACCGTGTTTCTCTAGGACAGAAGCTGTTGCGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGCAGAAGCTGGAGGGTGATATGGGTCCGTTAGTGAGTTGGGATATGAAGATGGCTCGGGAGATTGTCAATAGACTTGCTTCGGGATCACAAGTTCAGAAGCTGTGTTCTCTGGCAATGGAAGCTCTTGACAACATGGTCTCACCATTATCAGGATCTGTTTCAGGACAAGGTTAGTTCTCTGTTCACTCATTACTTATGTTTTGAAGTCAGAAGATGTTGACTTTGGCTCTCGTTAGGTGACATATTGAGTGTGAGAGTAGAAGAGATCCAAGCAAGATCAGTCACTGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGATCACGGGTGTGAAGGATGATGGAGATGAAGCAGGGAACAGGCAACGCCTATTGACAAACTCTAGCAGTGGTCTTTGTAGTAATCCATCTTTGCCTGAAGATGAATCCAACAATGTCAGTAAAAGCTGCTGCAAAGAAAATAGCGACAATAACAACGCTGAACACTGTAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGGGAGGAGACTTGCTTGTAATAACACCCTGCAAGAGAGACACATTTGACGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTGGGAGGAGATAAAGACTTGGGTCATATAGTGAAGACCATTAGATGTCTGGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGTAGTGAAGGTTTTTGTAGAGACTTTCAAGGATGATCTGTCTTCTCTGGGACAACAGCTTGTGGATACATTCTCAGAATGTGTACAGAGCAAGAGATCATCAACAACTGGTGGTGTACCTGCTGGAATCTGCCTAAAGCTCTGGCATTAA
CDS Sequence
- >Bo3g019340
ATGCAAGCTGCTTCGCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAACGTGTCGTGTGCACCGAGTTTCCTAAAAAGAAGGGTTTGAGTGTAAGCGAGAGAAGAGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATAATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGAAAGTACACTGGCCTAGCCAAACCAAAACTCATTGAAAACCTACTCAATCTCGTCTCTCGTCCTCTCGGTGAAACCTCGTGTCCTAACCGTAAAAGCTCGAGGAAGAAACAGAAGACGACTACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCAGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGAGAATAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTGAAGGAAGATGGGTATGGGATTGGGTATAATGATGGTAGTTTTCACTGCGTGTTTTGCGGCAAAGATAGTGATCTTCTCGGATGCTGGAGGAAGCAAGTGAAGGTTGCGAAAGAGACTGGGCGTGTGGATGTACTTTGTTACCGTGTTTCTCTAGGACAGAAGCTGTTGCGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGCAGAAGCTGGAGGGTGATATGGGTCCGTTAGTGAGTTGGGATATGAAGATGGCTCGGGAGATTGTCAATAGACTTGCTTCGGGATCACAAGTTCAGAAGCTGTGTTCTCTGGCAATGGAAGCTCTTGACAACATGGTCTCACCATTATCAGGATCTGTTTCAGGACAAGGTGACATATTGAGTGTGAGAGTAGAAGAGATCCAAGCAAGATCAGTCACTGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGATCACGGGTGTGAAGGATGATGGAGATGAAGCAGGGAACAGGCAACGCCTATTGACAAACTCTAGCAGTGGTCTTTGTAGTAATCCATCTTTGCCTGAAGATGAATCCAACAATGTCAGTAAAAGCTGCTGCAAAGAAAATAGCGACAATAACAACGCTGAACACTGTAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGGGAGGAGACTTGCTTGTAATAACACCCTGCAAGAGAGACACATTTGACGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTGGGAGGAGATAAAGACTTGGGTCATATAGTGAAGACCATTAGATGTCTGGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGTAGTGAAGGTTTTTGTAGAGACTTTCAAGGATGATCTGTCTTCTCTGGGACAACAGCTTGTGGATACATTCTCAGAATGTGTACAGAGCAAGAGATCATCAACAACTGGTGGTGTACCTGCTGGAATCTGCCTAAAGCTCTGGCATTAA
Protein Sequence
- >Bo3g019340
MQAASLSKIWRFDSNVGPEEDMDPSSFQRVVCTEFPKKKGLSVSERRELIHALSKQPEEASELLNSWSRDEIMKIICAEMGKERKYTGLAKPKLIENLLNLVSRPLGETSCPNRKSSRKKQKTTTSYIICCENLACRAALGSEDTFCRRCSCCVCQNFDENKDPSLWIACEGCGLSCHLECALKEDGYGIGYNDGSFHCVFCGKDSDLLGCWRKQVKVAKETGRVDVLCYRVSLGQKLLRGTRRYQNLLELMDEAVQKLEGDMGPLVSWDMKMAREIVNRLASGSQVQKLCSLAMEALDNMVSPLSGSVSGQGDILSVRVEEIQARSVTVRLDSEEPSSSSQNRITGVKDDGDEAGNRQRLLTNSSSGLCSNPSLPEDESNNVSKSCCKENSDNNNAEHCSAGEVESEIEEERVLKRKVNEIEGGDLLVITPCKRDTFDGKQGGNKRSKSRTSTKKPETNVAENGVGGDKDLGHIVKTIRCLEQEGHIDKSFRERFLTWYSLRATHREVKVVKVFVETFKDDLSSLGQQLVDTFSECVQSKRSSTTGGVPAGICLKLWH