Information report for BnaC06G0249500ZS
Gene Details
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Functional Annotation
- Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.
Homologous
- Arabidopsis thaliana: AT1G79430.2
- Brassica oleracea: XP_013589956.1, Bo6g081020, Bo2g095280, XP_013618086.1, XP_013589860.1, Bo6g123880
- Brassica rapa: XP_009104530.1, Bra003611, XP_009106664.1, Bra035118, XP_009128352.1, Bra008411
Gene Resources
- Pfam: PF14379 PF00249
- UniProt: A0A0D3CVT6
- RefSeq: XP_013589956.1
- AlphaFoldDB: A0A0D3CVT6
- KEGG: boe:106298391
- OMA: IMANACQ
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017930 , IPR025756 , IPR046955
- PANTHER: PTHR31499 , PTHR31499:SF43
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3CVT6
- SMR: A0A0D3CVT6
- eggNOG: ENOG502QQUN
- STRING: 109376.A0A0D3CVT6
- HOGENOM: CLU_040475_0_0_1
Sequences
gDNA Sequence
- >BnaC06G0249500ZS
TGTTCCATGCTAAGAAACCTTCAAGTATGAATGGTTCATATGAGAACAGAGCTATGTGCGTTCAAGGCGATTCAGGCCTCGTCCTCACCACCGATCCTAAACCGCGTTTGCGTTGGACCGTCGAACTTCACGATCGTTTCGTGGACGCCGTCGCTCAGCTTGGTGGCCCTGACAGTATGCACACCACCAAACGCATATATATGATCTTCATCAATTTAACCAAAAGATATAATAACAACTAAATGTTTATATCGTTTTTAATTTACAGAAGCCACTCCAAAGACGATCATGAGAGTTATGGGAGTGAAGGGTCTTACTCTTTACCACCTAAAGAGTCATCTTCAGGTATGTACACAAACATAAATTCGGGTTTTCTTTTATTCCTCGCTTTTAATTTCTACTTCTCTTTATCTTTTTGTTTTTTCACTTAAAATATAATTACTATATTATTAAAAAGAATTATCTGGATCTATGTGTGCAGAAATTCAGGCTTGGAAAGCAGCCGCACAAGGAGTATGGAGATCACTCAACAAAGGAAGGTTCAAGAGGTGACCACGCTTGCTTTCTCTATCATATTAGGGTTCTAGATAATTAAACATAATTTTTGTTTATATATATTTTATGTACCTGTGTATGTAAATTTTTAATCCATCAATTTCTCAAAAAAATATTTTACCGTGTAGCTTCTGTCATGGATATTCAGCGCAACGTAGCTTCTTCTTCTGGCATGATAAGTCGCAACATGAATGAGTATATCCTCTCTTCTCGTTAGTTTTATATACTTTCTTTTTGTACTAGCAGCTACTTACACTTGATTTATTTGATCAGGATGCAAATGGAAGTGCAGAGAAGGTTGCACGAACAGCTAGAGGTAATCAAATTCTATTTATATTTTATGACATTCAACTCTTACAAATTTAATTCTGATCCATAATACATATTGCATGCATTTAAATGTTTTTAGGTGCAGAGACATTTGCAGCTGAGGATTGAAGCACAAGGAAAGTACATGCAATCTATATTGGAGAGAGCTTGCCAAACCTTAGCCGGTGAGAACATGGCAGCCGCCGCCGTCGTCCAGGGAGGAGGGTATAAGGGCAATTTGGGAAGTTCGAGTCTTTCCGCAGCTATGGGTTCATCTCCTCATCCTCTTAGTTTCCCGCCGTTTCAGGACCTAAACATCTATGGAAACACAACCGAACAAGTCCTCGACCATCATAACTTCCATCACCAGAATATTGAGAACCATTACACGGGCAACAATGCTGCAGACACAAACATTTACTTGGGAAAGAGGCGACCAAGCCCTAGTTTTGGTAACGATGTAAGGAAAGAACTTTTAATGTGGTCTGATCATGATCAAGATCTTTCCGTAAACCAACCGTTCGATGATGAGCATCGGATTCAGATACAAATGGCTACACATATCTCCACGGATTTGGATTCTCTATCTGAACATAACCGTGGGAAGTTACTGGAAAGGCTATCGCCTCGAAGATCACCAGTGAGTCCTATGATGAACCCTAATGGTGGGTTAATACAAGGAATGAACTCACCATTTGGGTGA
CDS Sequence
- >BnaC06G0249500ZS
ATGTTCCATGCTAAGAAACCTTCAAGTATGAATGGTTCATATGAGAACAGAGCTATGTGCGTTCAAGGCGATTCAGGCCTCGTCCTCACCACCGATCCTAAACCGCGTTTGCGTTGGACCGTCGAACTTCACGATCGTTTCGTGGACGCCGTCGCTCAGCTTGGTGGCCCTGACAAAGCCACTCCAAAGACGATCATGAGAGTTATGGGAGTGAAGGGTCTTACTCTTTACCACCTAAAGAGTCATCTTCAGAAATTCAGGCTTGGAAAGCAGCCGCACAAGGAGTATGGAGATCACTCAACAAAGGAAGGTTCAAGAGCTTCTGTCATGGATATTCAGCGCAACGTAGCTTCTTCTTCTGGCATGATAAGTCGCAACATGAATGAGATGCAAATGGAAGTGCAGAGAAGGTTGCACGAACAGCTAGAGGTGCAGAGACATTTGCAGCTGAGGATTGAAGCACAAGGAAAGTACATGCAATCTATATTGGAGAGAGCTTGCCAAACCTTAGCCGGTGAGAACATGGCAGCCGCCGCCGTCGTCCAGGGAGGAGGGTATAAGGGCAATTTGGGAAGTTCGAGTCTTTCCGCAGCTATGGGTTCATCTCCTCATCCTCTTAGTTTCCCGCCGTTTCAGGACCTAAACATCTATGGAAACACAACCGAACAAGTCCTCGACCATCATAACTTCCATCACCAGAATATTGAGAACCATTACACGGGCAACAATGCTGCAGACACAAACATTTACTTGGGAAAGAGGCGACCAAGCCCTAGTTTTGGTAACGATGTAAGGAAAGAACTTTTAATGTGGTCTGATCATGATCAAGATCTTTCCGTAAACCAACCGTTCGATGATGAGCATCGGATTCAGATACAAATGGCTACACATATCTCCACGGATTTGGATTCTCTATCTGAACATAACCGTGGGAAGTTACTGGAAAGGCTATCGCCTCGAAGATCACCAGTGAGTCCTATGATGAACCCTAATGGTGGGTTAATACAAGGAATGAACTCACCATTTGGGTGA
Protein Sequence
- >BnaC06G0249500ZS
MFHAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHDRFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASVMDIQRNVASSSGMISRNMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAAAVVQGGGYKGNLGSSSLSAAMGSSPHPLSFPPFQDLNIYGNTTEQVLDHHNFHHQNIENHYTGNNAADTNIYLGKRRPSPSFGNDVRKELLMWSDHDQDLSVNQPFDDEHRIQIQMATHISTDLDSLSEHNRGKLLERLSPRRSPVSPMMNPNGGLIQGMNSPFG