Information report for Bo6g123880
Gene Details
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Functional Annotation
- Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.
Homologous
- Arabidopsis thaliana: AT1G79430.2
- Brassica napus: GSBRNA2T00148099001, BnaC06G0450000ZS, GSBRNA2T00146352001, BnaA07G0382600ZS, BnaA02G0237500ZS, BnaC02G0319400ZS
- Brassica rapa: XP_009106664.1, Bra035118, XP_009128352.1, Bra008411, XP_009128355.1
Gene Resources
- Pfam: PF14379 PF00249
- UniProt: A0A0D3D1U4
- RefSeq: XP_013589860.1
- AlphaFoldDB: A0A0D3D1U4
- KEGG: boe:106298304
- OMA: FFANCDM
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017930 , IPR025756 , IPR046955
- PANTHER: PTHR31499 , PTHR31499:SF43
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A0D3D1U4
- SMR: A0A0D3D1U4
- eggNOG: ENOG502QQUN
- STRING: 109376.A0A0D3D1U4
- HOGENOM: CLU_040475_0_0_1
Sequences
gDNA Sequence
- >Bo6g123880
CACCCAAATGGTGAGTTCCTTCCTTGTATTAACCCACTGTTAGGGTTCATCATAGGACTCAATGGTGACCTTCGAGGTGATGGCCTTTCCAGAAATTTGCCACCGTTATTTCCTTCATCACCTGACAAACCCGATTTCCTTTCGTAAATTTCCGACAGAGAATCCAAATCCGTGGAAACATGTGTAGCCATTTGTATCTGAATCCGATGCTCGTCATCGATGGCTTGGTTTCCAGAAAGATCATGATCTTGATCAGACCACATTAAGAGTTCTTTCCTTATATCGTTACCATAGCTAGGGTTTGGTCGCTTCTTCCCCAAGTAAATGTTGGTGTCTGCAGCATTGTTGGCCGTGTAATGATTCTCTATGTTCTGATGATGGAAGTTATGTTGGTCAAGAACTTGTTCGGTTGTGTTTCCATAAATGTTTAGGTCTTGAAACGGCGGGAAACTAAGAGGATGAGGTTGTGGACCCACCGCTGCGGAAAGACTTGTACTTCCCAAATTGGTCTTGTAACCTCCTCCGGCGGCGGCAGCGGCTGCCATGTTCTCACCGGCTAAGGTTTGGCAAGCTCTCTCCAATATAGTTTGCATGTACTTTCCTTGTGCTTCAATCCTCAGCTGCAAATGTCTCTGCACCTAAAACATTTAAATGCAATATATATTATATATCAACCAAAATTATCTTTTATAAGAGATGAATATTATAAAATATGAAAAAATTAACTACCTCTAGCTGTTCATGCAACCTTCTCTGCACTTCCATTTGCATCCTGATCAAATAAACCAAGTGTAAGTTGCTGCTAATATAAACAGAACATTAAAATAGATAAAATTAACGTGAAGAGAGGATGTACTCGTTCATGTTGCGGCTGATCATGCCAGAGGAGGAAGCTATGTTGCGCTGAATATCCATGGCAGAAGCTAAAGAAATATAATTTATTTTAGAGAACAATGGATTAAAAATACACATATATTATATATATATATATGTATATAATTTCTGCAACCCTAATATGATAGAGAAAGGAATAGTGGTCACCTCTTGAGCCTTCCTTTGTGGACTGATCTCCGTACTCCTTGTGCGGCTGCTTTCCAAGCCTGAATTTCTGCACTCATACAGCCAGGTAACATTATAATATTATTATATGATTAAGTGAAAAGAAAAAAAAAATATAGAGAGAAGAGAAAATCAAAAGCAAGTAAGGAAAGAAAACCCTAATTTATATTTGTGTACATACCTGAAGATGGCTCTTTAGGTGGTAAAGAGTAAGACCCTTCACACCCATAACTCTCATAATCGTCTTTGGAGTCGCTTCTGTAAATAAAAAGAACGATCAAAAACTTATTAGTATATAATTCTCAAAAAAAAAACTAGTATATGTTAAAATCGATCAAGATGATATATATGTGTGTGCATACTATCGGGGCCGCCGAGCTGAGCGACGGCATCGACAAAACGCTCGTGGAGTTCGACAGTCCAACGCAAACGCGGTTTAGGGTCGGTGGTGAGGACAAGGCCTGAATCTCCTTGAACGCACATAGCTCTGTTCTCATATGAACCATTCATACTTGAAGGTTTCTTAGCATGGAACAT
CDS Sequence
- >Bo6g123880
ATGTTCCATGCTAAGAAACCTTCAAGTATGAATGGTTCATATGAGAACAGAGCTATGTGCGTTCAAGGAGATTCAGGCCTTGTCCTCACCACCGACCCTAAACCGCGTTTGCGTTGGACTGTCGAACTCCACGAGCGTTTTGTCGATGCCGTCGCTCAGCTCGGCGGCCCCGATAAAGCGACTCCAAAGACGATTATGAGAGTTATGGGTGTGAAGGGTCTTACTCTTTACCACCTAAAGAGCCATCTTCAGAAATTCAGGCTTGGAAAGCAGCCGCACAAGGAGTACGGAGATCAGTCCACAAAGGAAGGCTCAAGAGCTTCTGCCATGGATATTCAGCGCAACATAGCTTCCTCCTCTGGCATGATCAGCCGCAACATGAACGAGATGCAAATGGAAGTGCAGAGAAGGTTGCATGAACAGCTAGAGGTGCAGAGACATTTGCAGCTGAGGATTGAAGCACAAGGAAAGTACATGCAAACTATATTGGAGAGAGCTTGCCAAACCTTAGCCGGTGAGAACATGGCAGCCGCTGCCGCCGCCGGAGGAGGTTACAAGACCAATTTGGGAAGTACAAGTCTTTCCGCAGCGGTGGGTCCACAACCTCATCCTCTTAGTTTCCCGCCGTTTCAAGACCTAAACATTTATGGAAACACAACCGAACAAGTTCTTGACCAACATAACTTCCATCATCAGAACATAGAGAATCATTACACGGCCAACAATGCTGCAGACACCAACATTTACTTGGGGAAGAAGCGACCAAACCCTAGCTATGGTAACGATATAAGGAAAGAACTCTTAATGTGGTCTGATCAAGATCATGATCTTTCTGGAAACCAAGCCATCGATGACGAGCATCGGATTCAGATACAAATGGCTACACATGTTTCCACGGATTTGGATTCTCTGTCGGAAATTTACGAAAGGAAATCGGGTTTGTCAGGTGATGAAGGAAATAACGGTGGCAAATTTCTGGAAAGGCCATCACCTCGAAGGTCACCATTGAGTCCTATGATGAACCCTAACAGTGGGTTAATACAAGGAAGGAACTCACCATTTGGGTGA
Protein Sequence
- >Bo6g123880
MFHAKKPSSMNGSYENRAMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDQSTKEGSRASAMDIQRNIASSSGMISRNMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILERACQTLAGENMAAAAAAGGGYKTNLGSTSLSAAVGPQPHPLSFPPFQDLNIYGNTTEQVLDQHNFHHQNIENHYTANNAADTNIYLGKKRPNPSYGNDIRKELLMWSDQDHDLSGNQAIDDEHRIQIQMATHVSTDLDSLSEIYERKSGLSGDEGNNGGKFLERPSPRRSPLSPMMNPNSGLIQGRNSPFG