Information report for BnaC06G0205200ZS
Gene Details
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Functional Annotation
- encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.
Homologous
- Brassica oleracea: XP_013590587.1, XP_013590586.1, XP_013590585.1, Bo6g072840, Bo8g091790, XP_013602949.1, Bo4g111230, XP_013634041.1
- Brassica rapa: XP_009104054.1, Bra007324, XP_009116442.1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A3P6G8C3
- EMBL: LR031880
- AlphaFoldDB: A0A3P6G8C3
- OMA: YLECYAV
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A3P6G8C3
- CDD: cd00265
Sequences
gDNA Sequence
- >BnaC06G0205200ZS
TGGGGAGAGGAAGGATTGAGATTAAGAAGATTGAGAATGTGAACAGTCGTCAAGTCACTTTCTCCAAAAGACGTAACGGGTTGATGAAGAAGGCCAAAGAGCTTTCGATCCTCTGCGACGCGGAGGTTGCTCTTATCATCTTCTCCAGCACCGGCAAGGTTTACGATTTCTCCAGCGGCTGGTAAAAAACAATGATTCTTTTTGTTCTGGGTTCATTTGAGATTAGCAAAGTATGTTACTTTCTATGTTTTGAGATTGAAAACAGAGCAACGTGTTTGTCCTCGAAAACAGAGCAAGCTACTTGTTCTGTCTTCTGGTTTAAAGACATACATCCTTGTAGAAATCGAGACTTGTGTCTCTGTAATTTGGATGGTTGTTAGTTATAAACCCTAACTGTTGAAAAAAATGCAATCTTGGTACTGATCTATAACTCTAAGATTATAGTAGACCATAGTTGATTTGTTTCCTAAGAGGTGTGTTTATCTCTTCTTTAGTGAAGAGATTGAGAATGCAGAAGAAATTTTCTAAGTCTTTTGGTTGTTTTGATGTTATGGTAAAGCCTACTAATGGATTAAGCTAATGAAGAGCGTGTGTTTTTCTTTCAAATGTGTTGAAGCATGGAGCAAACTCTTTCTAGATATGGAAACAATGCTGAAACGGCTGATCATAAACAAAGAGAACAACAACAGCTTTTACTTTGTTCTTATTCACATCAAAATGGTGTTGTGGTATGTGTGTCTATCTCTATAAGCAGTGATCCTCTCTATTGCAAACTTTTGTATCCCTTTTGTTACATGGATACCGTTGTTGCAGTTCCAAAAAGATGAGTCTACGAAGAGCGAGCTTGTGAGACTACAGCTTGCTATTGAGTATGTGTAGCATCTCCCTTAGGAAATTGTGAAGTTTTGGTTGTTTAATTTGGTTCATCTTTTGTATTTGTTCCTGAGAGCAGGAGACTGAAGGGTAAGAAGCTTGAGGGTATGAGTTTCTCGGATCTTATTTCTCTTGAAAACCAGTTGAATGATAGTTTGCATAGTGTCAAGAATCAAAAGGTGAAGACAATAGAACAATTTTTATTCAAAAAATTGAAATCCATCTGTGTATCATCTCTTGACTTACAAAGTTTTGTTTTGATTTAGACACAACTCTTGCTTAGCCAGGTAGAAAGATCCAGGTTACAGGTAAGAACAAGGCTTACTCAAACTGTTATCATTGATTCTTTACACAATGTTAAAACCTCACCATCTTTTTTTGTTTATTTTGGTTGTAATCATTAGGAGAGAAGAGCATTGGAAGAGAACCAACTCTTGCGCAAACAGGTAAACATTTGTTATACCCTTACATTAGCTTACTCTAGTCTTTACCATGTATACCACATTCAAATATAATTTTACCCTCAGGTAGAGATGTTGGGGAGAGGTTCATCAGGACCAAAAGGGTTGAGTGAAATACCTCAATTCTCTAGCCCACAAGCGGAGCACGAGAGCTCTTCATCAGATGATGACGATAATGACAATGAGGACCACCATTCTGACACTTCCTTGCAGCTGGGGTAAGTTACTAACAAAAGCCTTACCTTCTCTGTTTCAAGCTTTTTCTGGTTAGTTGACATCTCTGAGAAGTGAGAACTAAAAAAAACCATGTGGTTTTGTCTTTCTTAGGTTGTCATGGTCGGGGTATTGTAGAAAGATAAAGAAGCCAAAGATCGAATCACCCTGCGATAACTCTGGAAGTCAAGTGGCTTCTGGTTGA
CDS Sequence
- >BnaC06G0205200ZS
ATGGGGAGAGGAAGGATTGAGATTAAGAAGATTGAGAATGTGAACAGTCGTCAAGTCACTTTCTCCAAAAGACGTAACGGGTTGATGAAGAAGGCCAAAGAGCTTTCGATCCTCTGCGACGCGGAGGTTGCTCTTATCATCTTCTCCAGCACCGGCAAGGTTTACGATTTCTCCAGCGGCTGCATGGAGCAAACTCTTTCTAGATATGGAAACAATGCTGAAACGGCTGATCATAAACAAAGAGAACAACAACAGCTTTTACTTTGTTCTTATTCACATCAAAATGGTGTTGTGTTCCAAAAAGATGAGTCTACGAAGAGCGAGCTTGTGAGACTACAGCTTGCTATTGAGAGACTGAAGGGTAAGAAGCTTGAGGGTATGAGTTTCTCGGATCTTATTTCTCTTGAAAACCAGTTGAATGATAGTTTGCATAGTGTCAAGAATCAAAAGACACAACTCTTGCTTAGCCAGGTAGAAAGATCCAGGTTACAGGAGAGAAGAGCATTGGAAGAGAACCAACTCTTGCGCAAACAGGTAGAGATGTTGGGGAGAGGTTCATCAGGACCAAAAGGGTTGAGTGAAATACCTCAATTCTCTAGCCCACAAGCGGAGCACGAGAGCTCTTCATCAGATGATGACGATAATGACAATGAGGACCACCATTCTGACACTTCCTTGCAGCTGGGGTTGTCATGGTCGGGGTATTGTAGAAAGATAAAGAAGCCAAAGATCGAATCACCCTGCGATAACTCTGGAAGTCAAGTGGCTTCTGGTTGA
Protein Sequence
- >BnaC06G0205200ZS
MGRGRIEIKKIENVNSRQVTFSKRRNGLMKKAKELSILCDAEVALIIFSSTGKVYDFSSGCMEQTLSRYGNNAETADHKQREQQQLLLCSYSHQNGVVFQKDESTKSELVRLQLAIERLKGKKLEGMSFSDLISLENQLNDSLHSVKNQKTQLLLSQVERSRLQERRALEENQLLRKQVEMLGRGSSGPKGLSEIPQFSSPQAEHESSSSDDDDNDNEDHHSDTSLQLGLSWSGYCRKIKKPKIESPCDNSGSQVASG