Information report for Bo4g111230
Gene Details
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Functional Annotation
- encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.
Homologous
- Brassica napus: GSBRNA2T00047035001, BnaC04G0299700ZS, GSBRNA2T00149041001, BnaA04G0029400ZS, GSBRNA2T00155831001, BnaA09G0528500ZS, GSBRNA2T00121984001, BnaC08G0373200ZS, BnaA07G0198700ZS, GSBRNA2T00098861001
- Brassica rapa: XP_009139036.1, Bra014628, Bra007324, XP_009116442.1, XP_009104054.1
- Raphanus raphanistrum: RrC2400_p1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A0D3BXA7
- AlphaFoldDB: A0A0D3BXA7
- OMA: AEYDCAS
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- CDD: cd00265
- eggNOG: KOG0014
- HOGENOM: CLU_053053_0_2_1
Sequences
gDNA Sequence
- >Bo4g111230
CAGTCAGACGCCACTTGACTTCCAGAGTTATCGCAGGGCGGTTCGATCTTTGGCTTCTTTCTCTTTGCAAAATACCCCGTTGAAGACAGCCTAAGAAAAGCCAAAACACACAAGTTTTTTTAAATATAATTCTCAGAGATCTGAACAGAAGAGCAAAAAGCTTGTAACACAAGGTAGGGCTTTTGTTTGCAGCTTACCCCAGCTGCAAGGAAGTGTCGGAACGGAGCTCCTCGTTGTCATTTTCGTCATCATCGTCGGATGAAGAGCTCTCCGGCTCTGCCTGCGGACTAGAGAATTGAGGTATTTCACTCAACGGTTTTGGCCCTGATGAACCTCTCGCCAACATGTCTATCTGAATGTACATTAGCTTTGAACTCAGTGGAGATATGTTGAAGACTAGACTGAGCTAGTGTCAAGGACTTAAAGTAAATCTTTACCTGTTTACGCAGAAGCTGGTTCTCTTCCAGAGCTCTCTTCTCCTGGTAATCATAAGCAAATGAAACACAGATCGTGAGATGTAACATAGTCTAAGAACTGATGATGATACAATTTGAGGAGCTTTGTTCTTTACCTGTAACCTAGATCTTTCTACCTGGTTGAGCAAGAGTTGTGTCTGAATCAAAACAAAAACTTTTCAAGTCAGAGATGGTTCACAGATCGGTTTTAATCTTTTGAAAAAAGAATGATCTTTGTCTTCTTCACCTTTCGATCCTTGACGCTATGCAAGCTATCATTCAACTGGTTCTCGAGAGAAATAAGATCCGAGAAACCCATTCCCTCAAGCTCCTTACCCTTGAGTCTCCTATAAACAATGAACCAAAAAAAATGAAAAGGCAGAAGCTTTAACACAAGCACAAACACAAGTTTCTTGTCCAGGGAGACAGAGGCATACTCAATAGCAAGCTGTAGTCTCTCAAGTTCGCTCCTCAAAGACTCATCATTCCGCAACTGCAGCAACCCAAGTCCATGTAAGTAAAAGGGCTAACAAAAGCTAATCACTGCTTATAGATAGATAGACACACATACCACATCACCATTTTCTTGAGAAGAACAAAGTAGAAGCTGTTGTTGTTCTTCTCTTTGTCTATGACCAGCCGTAACAGCATTGTATCCATATCTAGACAGAATATGCTCCATACTTGAACACATTTGAAACAAAACAAAAAAACTCTCCTTTAATTAGTTTCAACCAAAATCACCAAAAGCCTCTAAAGATTGCTTCTTCATTCTCAATCTCAGATCTTTCTCAGACAAACCCAAATCCACAGACACAATCACGAGTCCTTAAACAACAAAACCCTAAGATGACATATGGACGCTTTGCTCTGTTTTCAAATCGCTTTCTTTAGACACAGAAACCCATAAAGCTAACCTTTTTACGAATCACAGATGAACCCAAAATCAACAAAAGACTCATCTTTTTTTTTTACCTGCCGCTGGAGAAATCGTAAACCTTGCCGGTGCTGGAGAAGACGATGACAGCGATCTCCGCGTCGCAGAGGATCGAAAGCTCGCTCGCCTTCTTCATCAGCCCGTTACGTCTCTTGGAGAAAGTCACTTGACGACTGTTCACATTCTCAATCTTCTTTATCTCTATCCTTCCTCTCCCCAT
CDS Sequence
- >Bo4g111230
ATGGGGAGAGGAAGGATAGAGATAAAGAAGATTGAGAATGTGAACAGTCGTCAAGTGACTTTCTCCAAGAGACGTAACGGGCTGATGAAGAAGGCGAGCGAGCTTTCGATCCTCTGCGACGCGGAGATCGCTGTCATCGTCTTCTCCAGCACCGGCAAGGTTTACGATTTCTCCAGCGGCAGTATGGAGCATATTCTGTCTAGATATGGATACAATGCTGTTACGGCTGGTCATAGACAAAGAGAAGAACAACAACAGCTTCTACTTTGTTCTTCTCAAGAAAATGGTGATGTGTTGCGGAATGATGAGTCTTTGAGGAGCGAACTTGAGAGACTACAGCTTGCTATTGAGAGACTCAAGGGTAAGGAGCTTGAGGGAATGGGTTTCTCGGATCTTATTTCTCTCGAGAACCAGTTGAATGATAGCTTGCATAGCGTCAAGGATCGAAAGACACAACTCTTGCTCAACCAGGTAGAAAGATCTAGGTTACAGGAGAAGAGAGCTCTGGAAGAGAACCAGCTTCTGCGTAAACAGATAGACATGTTGGCGAGAGGTTCATCAGGGCCAAAACCGTTGAGTGAAATACCTCAATTCTCTAGTCCGCAGGCAGAGCCGGAGAGCTCTTCATCCGACGATGATGACGAAAATGACAACGAGGAGCTCCGTTCCGACACTTCCTTGCAGCTGGGGCTGTCTTCAACGGGGTATTTTGCAAAGAGAAAGAAGCCAAAGATCGAACCGCCCTGCGATAACTCTGGAAGTCAAGTGGCGTCTGACTGA
Protein Sequence
- >Bo4g111230
MGRGRIEIKKIENVNSRQVTFSKRRNGLMKKASELSILCDAEIAVIVFSSTGKVYDFSSGSMEHILSRYGYNAVTAGHRQREEQQQLLLCSSQENGDVLRNDESLRSELERLQLAIERLKGKELEGMGFSDLISLENQLNDSLHSVKDRKTQLLLNQVERSRLQEKRALEENQLLRKQIDMLARGSSGPKPLSEIPQFSSPQAEPESSSSDDDDENDNEELRSDTSLQLGLSSTGYFAKRKKPKIEPPCDNSGSQVASD