Gene Details:
- Gene ID: BnaA03G0141500ZS
- Suggest Gene Name: FRIGIDA
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF07899
Functional Descriptions:
- Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.
Homologous
- Arabidopsis thaliana — AT4G00650
Sequences:
gDNA Sequence
- >BnaA03G0141500ZS
AGAATCAATGATAAACACATTTAGCTTCTGAACGAAATATCAATTACAGATCCTAAGCTTTCTGCTTGTTAAGCCCTAAGCTTTAAATATATTTTGTGGTTTCTTTGAAAAACAAAAACAATAAATTTTGTGGTTTCTTTGAAAAACAAAAACTGAATGTTAAATATTCTACATTCCTCCTATGCGGTCTTGTGATAAGTTACGAGGGGTCCTGTGATTGGACAAAGCCAAGTGTCTTTCTACAGATGGTGAATGTCTGTATAGACCATATGGCATTTGATGTTGCCCATGAACTGGAGGAGGGTACTCTTGAGGACGTCTCTGTCCGTGAACCGGAGAATAAGAATTTGGAGGCAGATGATCATACGCAGACACACTTCTTCCTAACCCACCAGGTGGAACCATATATTCAGGGGATCTCATAAGACCTGACCGATGAGGAAAACCTGATGATGGGCCGAGGTAACTACTGACAAGAGCTGATATTTCATCTGCATCTCCCTCTCTGTGACTAGGGAAGCTTCGGTGGTCGCGGTACATCGGAGAATAAGATGCGGCAGCTGTTGGTGGCATTTCCATTTCTGACAACCTTGGACGTTTCATCTGCTGGTTATACAATCTCTCGCTAATTGCCGCTTCCTCCCTTATACTGATGGATCTCGCTTCCTCCATTCGACTGATGGATCTCGCTTCCTCCATTCGACTGATAGATCTCGCTTCCTCCATCTGTTTGTCAAGCTGAACAATGTCTTTCTCAAGCTTGGCCATTTGCTCTTTGATCTGCCACCCTGGTACTTCTTTCGCTGGGTCTAACTTGTGAGCTTCCAAACACTTCATCACTGATGATAACGCATCCAACTGCTTTTCGTTCGCAGTTTTCTGTTGAGAAAATAAAAAAGCAAACAACGATAAGAATCAGAACAGGAAAAAAGAGTTTATCAAGGTAAACAACGAGTAAAGAAGAGTCATACAGATGCCATGGGTGCTTGTGCTTGACGTTTCGCCCTCTCAAATGAATCCTTCCTCATCCTTAGGAAGGAAGTTAGAATTGAAGAAGGTGAAAACCTATCCTCCATCCCAAAGGTATAAACCAGCTCAAGAGCTTCAATATGCATTCCACGCTTGAAACTTGAATCAACTATACCTATACGGCCAAAAGATTATTGTATTAAGATCCTTTTAGTAGACATTGCTCAAGGCTTATGTAGTATGCAACATAAAAGTCAAATGATTTGAACTTGCAATATCGAATGTGCAGCTTTACAACTTGTCATTGCATTCTAGAATGCCATGTTCTGTCCTATCTCATTGCATGGTACGTAAAATTCTACTCCCAAAATCATATAAACAACCAAACACAAAGATGAAAACTTGACTCTAACCCATTCCACAACAAAAGAAACCACCTTTGTAACGTACTCAAGAAAAGAACAAGGTACCTGACATCATAGGGACAAGAAACGGTGACCGTTTAAGAGCACCAACAATCTCATCAGTACCACTCTGCCTAATCAAATCCAACAAATCCATACTCTTAAAGCTCTCCGGAATCCCAAAACAAGCAACCAACAGAAGCAAACCCCTTGCGTCCATAGCCTCCGCTGCACCCAACCATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGCCTCATCTTTCACAGAACTAACCAAAAGCTTCTTCTTCTTCTCTCCCTCAGGATCAAACGTCAGAAGGTAACACTCCAGGATAAGAAGCGAAACCTTCCTCGCGGTGATCGCGGGCAAATCTTTGGCGAAGGCTTTGCGCCCTTGCAAGTAAAACTTCCCGATGCAGTCCAACACGAACTTCGCCGGGTCCTTGGCCAGCTTCAACGCTCCAGGAATCTCTTCGATTAGCTTGGCTCGCTCAGAGATGTTCACGAACATGTACCTTCGGAGCTCTTTGCTCCACATCGACTCGCAGAATCGCTCCGCTTCGGACTTCTCCTTGGGCGGCGATTGGCAAGCAATCGCCGTGGCTGTTTTGTTTTGCGGAGGAGGCGACGCGGCGGCGGTTTCGATGATGCCGTTAGTTTTGAGATTGGAGTCGATCGCGTTCCCGATGTAATCCATGTGGCTCTGCAGTTCGTCGTAGCGGCGTTTGAAGGCGTCGACTGCGGCTGCTAACGCGGTTAAGTCGACGATGGATTTCAAAAACTGAGGATCGTTAGATTGTTCGATCGTGGTTTCGATGTTTGTAGGCACGGTTTCGACAGTAGCCTGCGCTTCTCTCCGTTGGATCATCGCCGATGAAGGTTGCTCCTCCTCCCTTGTTGATGGAGCAGGGAGCAGAGAACCATTACGGACGGCCATTGGGGATTGCGGAAGAAG
CDS Sequence
- >BnaA03G0141500ZS
ATGGCCGTCCGTAATGGTTCTCTGCTCCCTGCTCCATCAACAAGGGAGGAGGAGCAACCTTCATCGGCGATGATCCAACGGAGAGAAGCGCAGGCTACTGTCGAAACCGTGCCTACAAACATCGAAACCACGATCGAACAATCTAACGATCCTCAGTTTTTGAAATCCATCGTCGACTTAACCGCGTTAGCAGCCGCAGTCGACGCCTTCAAACGCCGCTACGACGAACTGCAGAGCCACATGGATTACATCGGGAACGCGATCGACTCCAATCTCAAAACTAACGGCATCATCGAAACCGCCGCCGCGTCGCCTCCTCCGCAAAACAAAACAGCCACGGCGATTGCTTGCCAATCGCCGCCCAAGGAGAAGTCCGAAGCGGAGCGATTCTGCGAGTCGATGTGGAGCAAAGAGCTCCGAAGGTACATGTTCGTGAACATCTCTGAGCGAGCCAAGCTAATCGAAGAGATTCCTGGAGCGTTGAAGCTGGCCAAGGACCCGGCGAAGTTCGTGTTGGACTGCATCGGGAAGTTTTACTTGCAAGGGCGCAAAGCCTTCGCCAAAGATTTGCCCGCGATCACCGCGAGGAAGGTTTCGCTTCTTATCCTGGAGTGTTACCTTCTGACGTTTGATCCTGAGGGAGAGAAGAAGAAGAAGCTTTTGGTTAGTTCTGTGAAAGATGAGGCGGAGGCGGCTGCTGTTGCGTGGAAGAAGAGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCAAGGGGTTTGCTTCTGTTGGTTGCTTGTTTTGGGATTCCGGAGAGCTTTAAGAGTATGGATTTGTTGGATTTGATTAGGCAGAGTGGTACTGATGAGATTGTTGGTGCTCTTAAACGGTCACCGTTTCTTGTCCCTATGATGTCAGGTATAGTTGATTCAAGTTTCAAGCGTGGAATGCATATTGAAGCTCTTGAGCTGGTTTATACCTTTGGGATGGAGGATAGGTTTTCACCTTCTTCAATTCTAACTTCCTTCCTAAGGATGAGGAAGGATTCATTTGAGAGGGCGAAACGTCAAGCACAAGCACCCATGGCATCTAAAACTGCGAACGAAAAGCAGTTGGATGCGTTATCATCAGTGATGAAGTGTTTGGAAGCTCACAAGTTAGACCCAGCGAAAGAAGTACCAGGGTGGCAGATCAAAGAGCAAATGGCCAAGCTTGAGAAAGACATTGTTCAGCTTGACAAACAGATGGAGGAAGCGAGATCTATCAGTCGAATGGAGGAAGCGAGATCCATCAGTCGAATGGAGGAAGCGAGATCCATCAGTATAAGGGAGGAAGCGGCAATTAGCGAGAGATTGTATAACCAGCAGATGAAACGTCCAAGGTTGTCAGAAATGGAAATGCCACCAACAGCTGCCGCATCTTATTCTCCGATGTACCGCGACCACCGAAGCTTCCCTAGTCACAGAGAGGGAGATGCAGATGAAATATCAGCTCTTGTCAGTAGTTACCTCGGCCCATCATCAGGTTTTCCTCATCGGTCAGGTCTTATGAGATCCCCTGAATATATGGTTCCACCTGGTGGGTTAGGAAGAAGTGTGTCTGCGTATGATCATCTGCCTCCAAATTCTTATTCTCCGGTTCACGGACAGAGACGTCCTCAAGAGTACCCTCCTCCAGTTCATGGGCAACATCAAATGCCATATGGTCTATACAGACATTCACCATCTGTAGAAAGACACTTGGCTTTGTCCAATCACAGGACCCCTCGTAACTTATCACAAGACCGCATAGGAGGAATGTAG
Protein Sequence
- >BnaA03G0141500ZS
MAVRNGSLLPAPSTREEEQPSSAMIQRREAQATVETVPTNIETTIEQSNDPQFLKSIVDLTALAAAVDAFKRRYDELQSHMDYIGNAIDSNLKTNGIIETAAASPPPQNKTATAIACQSPPKEKSEAERFCESMWSKELRRYMFVNISERAKLIEEIPGALKLAKDPAKFVLDCIGKFYLQGRKAFAKDLPAITARKVSLLILECYLLTFDPEGEKKKKLLVSSVKDEAEAAAVAWKKRLVGEGWLGAAEAMDARGLLLLVACFGIPESFKSMDLLDLIRQSGTDEIVGALKRSPFLVPMMSGIVDSSFKRGMHIEALELVYTFGMEDRFSPSSILTSFLRMRKDSFERAKRQAQAPMASKTANEKQLDALSSVMKCLEAHKLDPAKEVPGWQIKEQMAKLEKDIVQLDKQMEEARSISRMEEARSISRMEEARSISIREEAAISERLYNQQMKRPRLSEMEMPPTAAASYSPMYRDHRSFPSHREGDADEISALVSSYLGPSSGFPHRSGLMRSPEYMVPPGGLGRSVSAYDHLPPNSYSPVHGQRRPQEYPPPVHGQHQMPYGLYRHSPSVERHLALSNHRTPRNLSQDRIGGM