Information report for BnaA03G0008200ZS
Gene Details
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Functional Annotation
- CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G02840.3, AT5G02840.2, AT5G02840.1
- Brassica oleracea: XP_013610518.1, XP_013610517.1, XP_013625291.1, XP_013625292.1
- Brassica rapa: Bra005751, XP_009130740.1, XP_009130739.1, Bra009562, XP_009122749.1, XP_009122748.1, XP_009130741.1
Gene Resources
- Pfam: PF00249
- UniProt: A0A816UZZ1
- EMBL: HG994357
- AlphaFoldDB: A0A816UZZ1
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF119
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- CDD: cd00167
Sequences
gDNA Sequence
- >BnaA03G0008200ZS
TGACCTCGTCTCTTTCAAGCAATCCGGTGGAAACGTCCACAGATCTTACAGAGACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATCTCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTAATATAGCTGAAAGTTGCTCCATTTTCTTCTTAGTATGTGACTTAATAATACACTTTGTTGCTGATACTGTTGTCTTGCGTCCTTAGGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGTTCAAAGACAGTTATTCAGGTTTGAGATTAACTGCTTTCGAGTTTTGGTTTATATATTTATACATTGCCACTCAACTTGATTTGCTACAGATCAGGAGCCATGCCCAAAAGTACTTTCTGAAGGTAGAGAAAAACGGGACCTTTGCGCACGTGCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCAAAGAATGGTTAGTTTTATTACAATATATTTTACTTTGGGTGGACATATGAAGTTAACTGTGTTCAATCTGAACATGCAGCGCAAATGTCGCTTCACGTTTCCATGTCATTTCCTCCCCAAATAAATGACGTTCCGGGATATCCTTCATGGGATGATGATACCTCTGCTTTGCTTAGCATAGCCGTGAGCGAGGTTATTCTACCAAAAGATGAGATTGACACTCTTTGTGGAGGAGAAGGCATGCATTCTCATCTCTACTCAATTTTTTTCTAAAATTTTGTTAGGCAGTTGAGTTACTCCATGTAAAGAAGGTTCATTATGCTAAATGAAGCTTGAAAATGTTATTGGTTTCAGTTGTTATTGAATTGAATGGCTCAACAAGTGCGGTTAGTCCTTCAGCATCCGGTATAGGAAGCTCAAGCAGAACTCTATCAGATTCAGAGGGTTTAACACCGGTGAATCAAGCTCCCTCAATGCAGGGTAATTATTTCTGAGTTTTTATTTTATGGTGGAGTTCACTGTTCTAATGGTTGTTTTTTTCGGCAGGTCTTCCTGATTTTGCTGAAGTTTATAACTTCATTGGGAGTGTGTTCGATCCTGACAGCAAAGGCCGCATGAAAAAGCTCAAGGAAATGGATCCTATTAATTTGAAACTGTGAGTTAGAACCTGCTTGATTGCCTTTTAAGTTAAATGATGTGTGTGACAGTAATATATTCATCATTTAGGGGACTTTTATCTTTATAGTAAGCCTGCCAGATAGCTGAATCTAATAGTAAAGGCTGCATTCTGTAGATTTTGTTTCAAAACAAAGTTTGCTTGGTAGTATGGTTCTGTGGAGATGTTGGCCAAATAAACAGCCTTGGTTCAGTATTTTCTTTTTAAGTTTCCTGGTGCATATACATAGCTGCCAGTTGATTGATCTTGATATAGTACCCTTGACTAATCGCTGTATGCCTGGCAGGTACTGCTATTGATGAGAAACCTCACAGTGAATATGTCAAATCCTGACTTCGAACCTTCTGTAAGTGTTAAAACTTATCATAGCTTCCATGCTTGTTAGACATTAGTCTCTTTCGCTCTTGATGTGCGTTACTTCTTTAAACATTCCAATGATTAAAATGAGGACTGTTGTGCTTTCTGACATTTATATACATTACACACATCAACTGCTGACTTCTGGAAACAGGTGTAATCTAACCTTGGTATTGATATAGTCTGATGCTGCAGAGGAAGGTTCAGAACACTTAAGCTCTTAGCTTTTGTTTGGGATCTCTGGCCAAGAACGAAACAAGTGATATATCTTTCTTGATGGAGTTCTTGCTCACAACAACTGTGTATATCAGCTATAAAGTAAGTGTGGTTTTATACCTCATCCTTCCGACATCAATGTAAACCAGACCTTACCGCATATATAAGCTTTAATCTCTCAGCTGAGCTGCTATAAGGAGTTACCATTGGCTATATGATCTCTCTGTGCATTTGGTGTATTGTGTCACATGGTAGATAAAATTTATAGTGTGTGTAGTAGAAAAATGGGCACCTATTGTATTTTCCTATTTGATATATATATTTATTTGTTCATGCGTTTTGTAATTTGTAGTTTTCTTTCCCACTTTAGACGATTGGTTATTTCTGGTCATATATTGATACTAAAGACAATGTCTCAGCTAGCAAATGCAACTAAACCCATAAAAGAGACACATGAGTCTGTTGTACCCTATTTGTATCAGGCATTAGCTTTTCCATGTCATGTCTCAAGCCTTTCTCCTTAACGATAACCGGGAAAATAAACTCAACCCTTTCTCATTAACGATAACCGGGAATCTGAATCGAACTGGTTTGGTTAAAGAGTGTTTTTAGAACCCTCTGCTCGCTCTGAAGGTTTGGAAGTGGTTTATTTATTATTATTTTTTCCCAGTGATCCACGAAAGGAGAAGTCCATTGTTTCGCCGGCGGCGAGGATGCTACAGCATCAGATTGCTCAATCGCCGGCGATATTAGGCTTAACAGGTCATGGCTCTCCCTCCGTACAAAACCCAACGCCTTCTCGTCATGGCCATCCTCCCAATCTCACCACCAACAACCTCCTAATAATCTCCCACCTTCCTCCTCCGCAGCCTCAGGTTCGTCTGCTTTGCTATCACTCCTTCCGCCGTTGCCCCGAGCGCAAGCTCTTCTCCAGCAGACGTCGATCTTAACGTCTAAGCTCTTCGACGTCTCTCCCAATCGAGCGCTCTGGCTCTCAGCTTTCCGCGGCTCTCTCCCTTCGTTCCTCTCTTCCTTCCACTCGCTGCCTCCGCCGCTTGAAATCCCTAAGCCTTCGTCCACCAACGAGATCCTCTCTCAGTTCAATTCCCTCCAGACGCACCTCTTCGAAGCCGTTACGGACCTCCAAGAGATCCTCGATCTCCAAGACGAAGACGCGAAGCAGAAGGTCGCGCGTGAGGTCAAATCCAAAGATTCGTCTCTTCTCTCCTTCGCCAACAAACTCAAGGAAGCAGAACGCGTTCTCGCTCTTCGTCCTCTGTTACCACCACAGTTTCTTCTCAGCTCAAGCTGAAGGACATCTTAGCCTACGCTCACAAGATTAGCTACACAACGTTTGCTCCTCCGGAGTTCGGTGCAGGGCAAGCACCTCTCCGCGGCGCGTTGCCGCCAGCGCCACAAGACGAGCAGATGAGAGCTTCTCAGCTCTGA
CDS Sequence
- >BnaA03G0008200ZS
ATGACCTCGTCTCTTTCAAGCAATCCGGTGGAAACGTCCACAGATCTTACAGAGACGACGACGGAAGCTCCGGAGAAGAAGGTGAGGAAAGCTTACACGATCTCCAAGTCCAGACAGAGTTGGACTGAAGGAGAGCACGATAAGTTTCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGAAGATTTTGTCGGTTCAAAGACAGTTATTCAGATCAGGAGCCATGCCCAAAAGTACTTTCTGAAGGTAGAGAAAAACGGGACCTTTGCGCACGTGCCACCCCCTAGGCCTAAGCGCAAAGCTGCTCATCCATATCCTCAAAAGGCATCAAAGAATGCGCAAATGTCGCTTCACGTTTCCATGTCATTTCCTCCCCAAATAAATGACGTTCCGGGATATCCTTCATGGGATGATGATACCTCTGCTTTGCTTAGCATAGCCGTGAGCGAGGTTATTCTACCAAAAGATGAGATTGACACTCTTTTTGTTATTGAATTGAATGGCTCAACAAGTGCGGTTAGTCCTTCAGCATCCGGTATAGGAAGCTCAAGCAGAACTCTATCAGATTCAGAGGGTTTAACACCGGTGAATCAAGCTCCCTCAATGCAGGGAGAAGTCCATTGTTTCGCCGGCGGCGAGGATGCTACAGCATCAGATTGCTCAATCGCCGGCGATATTAGGCTTAACAGGTCATGGCTCTCCCTCCGTACAAAACCCAACGCCTTCTCGTCATGGCCATCCTCCCAATCTCACCACCAACAACCTCCTAATAATCTCCCACCTTCCTCCTCCGCAGCCTCAGGTTCGTCTGCTTTGCTATCACTCCTTCCGCCGTTGCCCCGAGCGCAAGCTCTTCTCCAGCAGACGTCGATCTTAACGTCTAAGCTCTTCGACGTCTCTCCCAATCGAGCGCTCTGGCTCTCAGCTTTCCGCGGCTCTCTCCCTTCGTTCCTCTCTTCCTTCCACTCGCTGCCTCCGCCGCTTGAAATCCCTAAGCCTTCGTCCACCAACGAGATCCTCTCTCAGTTCAATTCCCTCCAGACGCACCTCTTCGAAGCCGTTACGGACCTCCAAGAGATCCTCGATCTCCAAGACGAAGACGCGAAGCAGAAGGTCGCGCGTGAGGTCAAATCCAAAGATTCGTCTCTTCTCTCCTTCGCCAACAAACTCAAGGAAGCAGAACGCCTCAAGCTGAAGGACATCTTAGCCTACGCTCACAAGATTAGCTACACAACGTTTGCTCCTCCGGAGTTCGGTGCAGGGCAAGCACCTCTCCGCGGCGCGTTGCCGCCAGCGCCACAAGACGAGCAGATGAGAGCTTCTCAGCTCTGA
Protein Sequence
- >BnaA03G0008200ZS
MTSSLSSNPVETSTDLTETTTEAPEKKVRKAYTISKSRQSWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVEKNGTFAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPPQINDVPGYPSWDDDTSALLSIAVSEVILPKDEIDTLFVIELNGSTSAVSPSASGIGSSSRTLSDSEGLTPVNQAPSMQGEVHCFAGGEDATASDCSIAGDIRLNRSWLSLRTKPNAFSSWPSSQSHHQQPPNNLPPSSSAASGSSALLSLLPPLPRAQALLQQTSILTSKLFDVSPNRALWLSAFRGSLPSFLSSFHSLPPPLEIPKPSSTNEILSQFNSLQTHLFEAVTDLQEILDLQDEDAKQKVAREVKSKDSSLLSFANKLKEAERLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQL