Information report for A4A49_34832
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Gossypium hirsutum: Gohir.A11G074700
- Juglans regia: Jr05_02460, Jr05_02450, Jr14_02920
- Populus trichocarpa: POPTR_014G051500v3
- Prunus persica: PRUPE_2G120600
- Sesamum indicum: SIN_1009863
- Solanum lycopersicum: Solyc01g088800.3, Solyc10g062180.2
- Solanum tuberosum: PGSC0003DMG400001694, PGSC0003DMG400003492
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: A0A1J6ISI1
- EMBL: MJEQ01037183
- AlphaFoldDB: A0A1J6ISI1
- OMA: IWIFYIM
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: A0A1J6ISI1
- SMR: A0A1J6ISI1
- CDD: cd00590
- STRING: 49451.A0A1J6ISI1
Sequences
CDS Sequence
- >A4A49_34832
ATGCCTCCGAGAGCTGTAAAGAGGACGCCGACAGGATCCGGAACGAAACGGGGCGGCCGGACAAACCGAGGGACACATAAATCAAAGGAAAAACAACCGGTAGTGATGGCGGATGAACCGGTAAAAGTTGAGGTTTCTGCAGCGGAGGAGGAGAAGAAGCTGGAGCTGAAACAAGAATTGAAGGCGGAGCAACCGGTGGCCGAGGAGAAATCCGAGCTTGAAAAGCCGGTCAAAGCGGAGCCGGAGGTGAAACCTGTGGAGAAGACGGACGATGTGAAAGATTCAGATGAATATGAAAAAGGCGAACGCTTAGATTTGGATGATAATGATCCTGAATATGAACCCGAAGAGTATGGCGCTGTAGATTATGACGAGAGAGGAATTGAACATGAGGATGTTCAGGAAGAGGGTTATGAAATAGAGGAAGATCCCCAAGAGGGAGATGATGGTGAGGAGGAGGAGGAAGGTGACATGGTTGAAGATGATGTTGAAGATATGCACGAGGAAATTGAGGGTGAGGAAGATGGCGAGCATGCAGAAGGAGAGGAGCATGCAGAGATGGTTGATGCAGCTGAGGATGAAGAACATCATGAAGTTGTTAAAGAAAGACTTAAGAGGAAGGAATTTGAAGTTTTTGTTGGTGGCTTGGACAAGGATGCTACTGAGGATGATCTCAGGAAAGTTTTCAGTCAAGTTGGTGAGGTCACTGAAGTGAGACTCTTAATGAATCCTCAGACAAAGAAGAATAAAGGATTTGCATTCCTGCGTTTTGCAACAGTGGAACAAGCAAAACGAGCTTGTATTGAGCTGAAAAATCCAGTGGTGAATGGGAAAAAATGTGGTGTTTCCCCAAGTCAGGACAGTGATACCCTATTTTTGGGTAACATATGCAAATCTTGGACAAAAGAAGCCTTAAAAGAGAAGTTGAAGCATTATGGCGTTAATAATGTTGAGGATTTGACATTGGTTGAAGACACTAATAATGAGGGTATGAATCGAGGCTTTGCTTTTCTGGAGTTCTCTTCACGCTCAGAGGCCATGGATGCATTTAAACGTCTACAGAAGAGAGATATTGTGTTTGGAGTTGATAGGCCTGCCAAGGTTTCTTTTGCAGATTCATTCATTGACCCTGGAGATGAAATTATGGCACAGGTTAAAACAGTTTTTATTGATGGTCTTTCTGCATCTTGGGATGAGGATCGTGTGAGGGATCTTCTTAAAGAATATGGCAATATTGAAAAAATTGAGCTAGCCCGTAATATGCCTTCAGCCAAGAGAAAGGATTTTGGATTTGTCAGTTTTGACACTCATGAAGCTGCAGTTGTTTGTGCCAAAAGCATTAATAATGAAGAGTTGGGTGAAGGAGATAAGAAGGTTAAAGTTAGGGCCAGATTATCAAGGCCACTTCAGAGAGGAAGAGGGAGATATGGTGCACGTGATCTGCGACCTCGACATGGGTTGATGCGTGGTCCTCGTGCTCCATGGGGTCGTCCAGTCCCACATAGACTCCCTGTTCGTGGATCTAGAGTTAGTACACGTGTCCCTCCCCTTGCTGATCGTAGTTTCAAACGACCTGCCGCAATGAGGGATAGGCGACCGGTTATGGCTGTGGCTCCAAGGGGCAGACCTGTGGCTCCATTATCGAGCAGGTCTTATGACCGGAGACCACCTGTTCACTCGTACCCAAAGAGTAAGAGGGAGTATGCACGGCATGAGGAAATTCCTCCTCCTAGAAGCAGAGCCGCAGTGGACTATCCTTCTAGGTTTCCTTCCGATAGACGCAGCTCGTACAGGGATGACTATTCTTCTCGTAGCTCGGGTTACCCTGATTTTCCAAGAGGTACTGCTCGCACATCAACAAGGAGAGCTTATGTTGATGATGGATATGAAGAACGGTATGAAAGGCCTCCTCCTGCTTATCGCGAGGGGCGAGGTAGGGAATATGATTCCATATCTGGCTCCAAACGTTCATACAGTTCACTGGATGAGGTCCCTCCCCGCTATGCTGAAGCAGGAGTCCGCACTTCTCGTTCTCGTTTGGATTATGAACTTGGTGGTGCGAGTGGCACACAGTACGGGGATTATAGTGACAGTAGGTTAGGGAGATCAAATCTTGGATATAGTGGCAGCCGGAGTTCCCTTTCTGGGCAAGATTCTCATGGAATGTATAGCAGTCGTCAGGGAGGCTATGGCGGAGGCTCTTATGGGGGCAGTGATGTCAGTGGAATGTATTCATCTGGCTATGGTGGCGATTACGTGTCTCGTGGCAGTGATGTTGGTGGTAGCTCTTATTCATCAGCCTATTCCAGTCGTGGCATGGGTGGTAGTGGTTATATGGGTAGTGGTGGTTCTGGATCTTATTACTAA
Protein Sequence
- >A4A49_34832
MPPRAVKRTPTGSGTKRGGRTNRGTHKSKEKQPVVMADEPVKVEVSAAEEEKKLELKQELKAEQPVAEEKSELEKPVKAEPEVKPVEKTDDVKDSDEYEKGERLDLDDNDPEYEPEEYGAVDYDERGIEHEDVQEEGYEIEEDPQEGDDGEEEEEGDMVEDDVEDMHEEIEGEEDGEHAEGEEHAEMVDAAEDEEHHEVVKERLKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLLMNPQTKKNKGFAFLRFATVEQAKRACIELKNPVVNGKKCGVSPSQDSDTLFLGNICKSWTKEALKEKLKHYGVNNVEDLTLVEDTNNEGMNRGFAFLEFSSRSEAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFIDGLSASWDEDRVRDLLKEYGNIEKIELARNMPSAKRKDFGFVSFDTHEAAVVCAKSINNEELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRHGLMRGPRAPWGRPVPHRLPVRGSRVSTRVPPLADRSFKRPAAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVHSYPKSKREYARHEEIPPPRSRAAVDYPSRFPSDRRSSYRDDYSSRSSGYPDFPRGTARTSTRRAYVDDGYEERYERPPPAYREGRGREYDSISGSKRSYSSLDEVPPRYAEAGVRTSRSRLDYELGGASGTQYGDYSDSRLGRSNLGYSGSRSSLSGQDSHGMYSSRQGGYGGGSYGGSDVSGMYSSGYGGDYVSRGSDVGGSSYSSAYSSRGMGGSGYMGSGGSGSYY