Gene Details:

  • Gene ID: A04p006460.1_BraROA
  • Suggest Gene Name: HISTONE H2A 11
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.

Homologous

Sequences:

gDNA Sequence
  • >A04p006460.1_BraROA
    TGGCAGGCAAGGGAGGGAAAGGGCTCGTGGCTGCGAAGACGATGGCTGCTAACAAGGACAAAGACAAGGGCAAGATGAAACCCATCTCTCGATCTGCTCGTGCTGGTATTCAGGTGATCCCCCTCGAACCCTAGCTTATTGGGTTTCTTGAAATTCGAATCCTTTTTGACTGTTATTGGACTCGAGAAGAGTGGTGTTTGCAGGGTATCAGATAAAGTTGTTTCCTTTGCTATGTGTTACTTGCGTAGATGTGTGTTCTTGAAATTCGAGTCCTTTGACTCTTATTGGAGTTGAGAAGAGTGGTGTTTGCAGGGTATTAGAGTCTTTTCTCTTGTGATTTGAATAGTAAAGTTGTTTCCTTTGCAATGTCTTATGTGTTTCAGATGTTTGACTTAGTTAGTAAAGAGATATTCTGCAAAATCTTATTGATAGTTTCGTGTGGCTGTTGTGGTTACTGGTTGTGCATTGCTGTTTAGTCATATGTTTGGAGCCCCCCCAAATTTTCTAACTAGTATCTTAAAATGCCTCATAGACTTTATGACCCTGAAGCTTACTTTGTGTACTCGTGAGGTCTGGTTTGGAATTAGATCTGAAGGTTATACAATTATAATGAAACTGTTTGTTGTGTACTCAAAAGACACTATTTCTAAATTCTAAAGCTTTTCATTTAACTGTGTGCTTGATTTTTGTTGAATTCATGAAATGCTTTTGTGATGATAATGACATAGAAGGTTGCGATAAGTGTTAGGACAATTACATGAATAAAGCTCTTAGCAGAGAAAAGGTTGTTTACTTTGTTTGCCTCATAAGAAATATCAATGACAAAATCAGTGTACCATGCATCTTCTGCTCTGTTATGATATTTTTATGTTGTGCATAGCCATACAAATTGTTAGATAGGAGGCTGTCTTTATTTGATTGTAATGAAACTGTCTGTTGTGTAATGAAACTGTTTGTTGTGTACTGTCAAAAGCACACTATTTCTAAATTCTAGAGCTTTTCATTTGATTATCTTCCTGGAAACGGATGTTGCTTGAATTCATCATAGAAGTGCCCTTGTGATGATAATAACATATAAGCCTGTGATAAGTCTAGGACAACTAGATGAATGAAGCTCTTTAGCAGATAAAGGTTCTTTACTTTGTAAATCAGTGTACAGACTTGTTGGTAACGTCTTCTGCTCTGTTATGATATTTACTGTTGTGCATAGCCATACATATTGTAGATGGGTCTTATATTGTTGAAGGCTCTCTTTATGTTATTGTATAATGGCTCACTTTGGATGCTGCTTCTTTTCTCATTTCAGTTTCCAGTGGGTCGTATCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCCACTGCTGCTGTGTACACTGCTTCGATTCTAGAGTACCTGACTGCAGAAGTTCTTGAGTTGGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGGTAACTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACGCTCATCAAAGGAACCATTGCCGGAGGTGGTGTGATCCCTCACATCCACAAGTCTCTCATCAACAAAACCACCAATGAGTGA
CDS Sequence
  • >A04p006460.1_BraROA
    ATGGCAGGCAAGGGAGGGAAAGGGCTCGTGGCTGCGAAGACGATGGCTGCTAACAAGGACAAAGACAAGGGCAAGATGAAACCCATCTCTCGATCTGCTCGTGCTGGTATTCAGTTTCCAGTGGGTCGTATCCATAGGCAACTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCCACTGCTGCTGTGTACACTGCTTCGATTCTAGAGTACCTGACTGCAGAAGTTCTTGAGTTGGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGGTAACTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACGCTCATCAAAGGAACCATTGCCGGAGGTGGTGTGATCCCTCACATCCACAAGTCTCTCATCAACAAAACCACCAATGAGTGA
Protein Sequence
  • >A04p006460.1_BraROA
    MAGKGGKGLVAAKTMAANKDKDKGKMKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRVTPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTNE