Information report for Bo4g119860
Gene Details
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Functional Annotation
- Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.
Homologous
- Brassica napus: BnaC04G0323800ZS, BnaC06G0189900ZS, BnaA09G0504600ZS, BnaC08G0345800ZS, BnaC03G0220900ZS
- Brassica rapa: Bra014808, Bra003188, Bra007080
- Gossypium hirsutum: Gohir.D08G205900, Gohir.A08G187600
- Musa acuminata: Ma00_g00340
- Setaria viridis: SEVIR_9G095432v2
- Zea mays: GRMZM2G056231
Gene Resources
- Pfam: PF00125 PF16211
- UniProt: A0A3P6C6M9
- EMBL: LR031873
- AlphaFoldDB: A0A3P6C6M9
- InterPro: IPR002119 , IPR007125 , IPR009072 , IPR032454
- PANTHER: PTHR23430
- SUPFAM: SSF47113
- Gene3D: 1.10.20.10
- SMR: A0A3P6C6M9
- CDD: cd00074
Sequences
gDNA Sequence
- >Bo4g119860
TCCCCCCAAGATTTTTAAAATATTTCAAAACTCCCACCAAAATTCCAACTTTAAAACCCCCCACCCCATTCAACGCAACCAGATTTCGTTTCGTCTCCTCGTCGTCTCAGGTACTTCTCTCTCTCTCTCTCTCTACGATCTGGGATCTGTTTACGATTCTCAACCAAAACCCCTCAGATCTTGTCTTGTTTAATGTATAGTCTTCTTCTAGATTCAATAGATCTGAAATTTTTCTGCGGGGTTTTGCTTGTTCTTGCTTGGTAGGATCTAAGAAGTGAGGGAACACCAATCGCGAGCGAGAACATGGCAGGCAAGGGAGGGAAAGGGCTCGTTGCTGCGAAGACGATGGCTGCTAACAAGGACAAAGACAAGGGCAAGATGAAACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGGTGATCCCCTTAGAACCCTAGCTAATTGGGTTTCTTGAAATTCGAATCCTTTTGACTGTTATTGGACTCGAGAAGAGTGGTGTTTGCAGGGTATTAGATAAAGTTGTTTCCTTTTGCCATGTCTTACTTGCGTAGATGTGTTTCTGATGTTTAACTTAGTAAAGAGATATTCTGCGAATCTTATTGATAATTTTGTGTGGCTTTTGTGGTTGCTGGTTGTGTATATATATATATATATATATATATCTCAGTATGTAATTGCTGTTTTGTCATATGTTTGGAGCTACCAAATTTTATATTAAAGGCCACAGAGACTCTCTTACCCTGAAATTAATTTCTGTACTCGTGAGGTCGTTTAAGTTTCGTTTGTGATTAGATCTAGGTTATAAACAATTGTAATGAAACTGTTTGTTGTGTACTGTCAGAAGATTCTATTTCCTAATTCTAAAGCTTTTCATTTGACTATGTGCTTGATATTGTTGGATTCATGAAATGCTTTTGTGATGATAATGACATATAAGGTTGTGATAAGTGTTAGGACAACTACATGAATAAAGCTCTTTAGCAGAGAAAAGGCTGTTTACTTTGTTTGCCTCATAAGAAATATCAATGAGAGGTATATAAATCAGTGTACCATGCATCTTCTGCTCTGTTATAATATTTTTATTTTGTGCATAGCCATACAAATTGTTAGATAGGAGGCTGTCTTTATTTTATTTTAATGAAACTGTCTGTTTTGTAATAAAACTGTTTGTTGTGTACTGTCAAAGCACACTATTTCTAAATTCTAGAGCTTTTCATTTGATTATCTTCCTGGAAACGGATGTTGCTTGAATTCATAGAAGTGCCCTTGTGATGATAATGACATATAAGCCTGTGATAAGTCTAGGACAACTAGATGAATGAAGCTCTTTAGCAGATAAAGGTTCTTTACTTTGTAAATCAGTGTACAGACTTGTTGGTACATCTTCTGCTCTGTTATGATATTTACTGTTGTGGATAGCCATACATGCTGTAGATGGCTCTTATAATGTTGATGGATCTCCTTATGTTATTGCATAATGTCTCACTTTGGTTGCTGCTTCTTTTCTTGTTTCAGTTTCCAGTGGGTCGTATCCATAGGCAGCTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCCACTGCTGCCGTTTACACAGCTTCGATTCTAGAGTACCTGACTGCGGAAGTTCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAACTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACGCTCATCAAAGGAACCATTGCCGGAGGTGGTGTGATCCCTCACATCCACAAGTCTCTCATCAACAAAACCACCAATGAGTGA
CDS Sequence
- >Bo4g119860
TTCCCCCCAAGATTTTTAAAATATTTCAAAACTCCCACCAAAATTCCAACTTTAAAACCCCCCACCCCATTCAACGCAACCAGATTTCGTTTCGTCTCCTCGTCGTCTCAGGATCTAAGAAGTGAGGGAACACCAATCGCGAGCGAGAACATGGCAGGCAAGGGAGGGAAAGGGCTCGTTGCTGCGAAGACGATGGCTGCTAACAAGGACAAAGACAAGGGCAAGATGAAACCCATCTCTCGATCTGCTCGTGCCGGTATTCAGTTTCCAGTGGGTCGTATCCATAGGCAGCTCAAGACCAGGGTTTCAGCACACGGAAGAGTTGGTGCCACTGCTGCCGTTTACACAGCTTCGATTCTAGAGTACCTGACTGCGGAAGTTCTTGAGTTAGCTGGAAACGCAAGCAAGGATCTGAAAGTGAAGAGGATAACTCCAAGGCATTTGCAGTTGGCAATCAGAGGAGATGAGGAGCTTGACACGCTCATCAAAGGAACCATTGCCGGAGGTGGTGTGATCCCTCACATCCACAAGTCTCTCATCAACAAAACCACCAATGAGTGA
Protein Sequence
- >Bo4g119860
FPPRFLKYFKTPTKIPTLKPPTPFNATRFRFVSSSSQDLRSEGTPIASENMAGKGGKGLVAAKTMAANKDKDKGKMKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTNE