Gene Details:

  • Gene ID: A03p017010.1_BraROA
  • Suggest Gene Name: FRIGIDA
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.

Homologous

Sequences:

gDNA Sequence
  • >A03p017010.1_BraROA
    TACATTCCTCCTATGCGGTCTTGTGATAAGTTACGAGGGGTCCTGTGATTGGACAAAGCCAAGTGTCTTTCTACAGATGGTGAATGTCTGTATAGACCATATGGCATTTGATGTTGCCCATGAACTGGAGGAGGGTACTCTTGAGGACGTCTCTGTCCGTGAACCGGAGAATAAGAATTTGGAGGCAGATGATCATACGCAGACACACTTCTTCCTAACCCACCAGGTGGAACCATATATTCAGGGGATCTCATAAGACCTGACCGATGAGGAAAACCTGATGATGGGCCGAGGTAACTACTGACAAGAGCTGATATTTCATCTGCATCTCCCTCTCTGTGACTAGGGAAGCTTCGGTGGTCGCGGTACATCGGAGAATAAGATGCGGCAGCTGTTGGTGGCATTTCCATTTCTGACAACCTTGGACGTTTCATCTGCTGGTTATACAATCTCTCGCTAATTGCCGCTTCCTCCCTTATACTGATGGATCTCGCTTCCTCCATTCGACTGATGGATCTCGCTTCCTCCATTCGACTGATAGATCTCGCTTCCTCCATCTGTTTGTCAAGCTGAACAATGTCTTTCTCAAGCTTGGCCATTTGCTCTTTGATCTGCCACCCTGGTACTTCTTTCGCTGGGTCTAACTTGTGAGCTTCCAAACACTTCATCACTGATGATAACGCATCCAACTGCTTTTCGTTCGCAGTTTTCTGTTGAGAAAATAAAAAAGCAAACAACGATAAGAATCAGAACAGGAAAAAAGAGTTTATCAAGGTAAACAACGAGTAAAGAAGAGTCATACAGATGCCATGGGTGCTTGTGCTTGACGTTTCGCCCTCTCAAATGAATCCTTCCTCATCCTTAGGAAGGAGGTTAGAATTGAAGAAGGTGAAAACCTATCCTCCATCCCAAAGGTATAAACCAGCTCAAGAGCTTCAATATGCATTCCACGCTTGAAACTTGAATCAACTATACCTATACGGCCAAAAGATTATTGTATTAAGATCCTTTTAGTAGACATTGCTCAAGGCTTATGTAGTATGCAACATAAAAGTCAAATGATTTGAACTTGCAATATCGAATGTGCAGCTTTACAACTTGTCATTGCATTCTAGAATGCCATGTTCTGTCCTATCTCATTGCATGGTACGTAAAATTCTACTCCCAAAATCATATAAACAACCAAAAACAAAGATGAAAACTTGATTCTTTCTAACCCATTCCACAACAAAAGAAACCACCTTTGTAACGTACTCAAGAAAAGAACAAGGTACCTGACATGATAGGGACAAGAAACGGTGACCGTTTAAGAGCACCAACAATCTCATCAGTACCACTCTGCCTAATCAAATCCAACAAATCCATACTCTTAAAGCTCTCGGGAATCCCAAAACAAGCAACCAACAGAAGCAAACCCCTGGCGTCCATAGCCTCCGCTGCACCCAACCATCCTTCACCCACCAGCCTCTTCTTCCACGCAACAGCAGCCGCCTCCGCCTCATCTTTCACAGAACTAACCAAAAGCTTCTTCTTCTCTCCCTCTCCCTCAGGATCAAACGTCAGAAGGTAACACTCCAGGATAAGAAGCGAAACCTTCCTCGCGGTGATCGCGGGCAAATCGTTGGCGAAGGCTTTGCGCCCTTGCAAGTAAAACTTCCCGATGCAGTCCAACACGAACTTCGCCGGGTCCTTGGCCAGCTTCAACGCTCCAGGAATCTCTTCGATTAGCTTGGCTCGCTCAGAGATGTTCACGAACATGTACCTTCGGAGCTCTTTGCTCCACATCGACTCGCAGAATCGCTCCGCTTCGGACTTCTCCTTGGGCGGCGATTGGCAAGCAATCGCCGTGGCTGTTTTGTTCTGCGGAGGAGGCGACGCGGCGGCGGTTTCGATGATGCCGTTAGTTTTGAGATTGGAGTCGATCGCGTTCCCGATGTAATCCATGTGGCTCTGCAGTTCGTCGTAGCGGCGTTTGAAGGCGTCGACTGCGGCTGCTAACGCGGTTAAGTCGACGATGGATTTCAAAAACTGAGGATCGTTAGATTGTTCGATCGTGGTTTCGATGTTTGTAGGCACGGTTTCGACAGTAGCCTGCGCTTCTCTCCGTTGGATCATCGCCGATGAAGGTTGCTCCTCCTCCCTTGTTGATGGAGCAGGGAGCAGAGAACCATTACGGACGGCCAT
CDS Sequence
  • >A03p017010.1_BraROA
    ATGGCCGTCCGTAATGGTTCTCTGCTCCCTGCTCCATCAACAAGGGAGGAGGAGCAACCTTCATCGGCGATGATCCAACGGAGAGAAGCGCAGGCTACTGTCGAAACCGTGCCTACAAACATCGAAACCACGATCGAACAATCTAACGATCCTCAGTTTTTGAAATCCATCGTCGACTTAACCGCGTTAGCAGCCGCAGTCGACGCCTTCAAACGCCGCTACGACGAACTGCAGAGCCACATGGATTACATCGGGAACGCGATCGACTCCAATCTCAAAACTAACGGCATCATCGAAACCGCCGCCGCGTCGCCTCCTCCGCAGAACAAAACAGCCACGGCGATTGCTTGCCAATCGCCGCCCAAGGAGAAGTCCGAAGCGGAGCGATTCTGCGAGTCGATGTGGAGCAAAGAGCTCCGAAGGTACATGTTCGTGAACATCTCTGAGCGAGCCAAGCTAATCGAAGAGATTCCTGGAGCGTTGAAGCTGGCCAAGGACCCGGCGAAGTTCGTGTTGGACTGCATCGGGAAGTTTTACTTGCAAGGGCGCAAAGCCTTCGCCAACGATTTGCCCGCGATCACCGCGAGGAAGGTTTCGCTTCTTATCCTGGAGTGTTACCTTCTGACGTTTGATCCTGAGGGAGAGGGAGAGAAGAAGAAGCTTTTGGTTAGTTCTGTGAAAGATGAGGCGGAGGCGGCTGCTGTTGCGTGGAAGAAGAGGCTGGTGGGTGAAGGATGGTTGGGTGCAGCGGAGGCTATGGACGCCAGGGGTTTGCTTCTGTTGGTTGCTTGTTTTGGGATTCCCGAGAGCTTTAAGAGTATGGATTTGTTGGATTTGATTAGGCAGAGTGGTACTGATGAGATTGTTGGTGCTCTTAAACGGTCACCGTTTCTTGTCCCTATCATGTCAGGTATAGTTGATTCAAGTTTCAAGCGTGGAATGCATATTGAAGCTCTTGAGCTGGTTTATACCTTTGGGATGGAGGATAGGTTTTCACCTTCTTCAATTCTAACCTCCTTCCTAAGGATGAGGAAGGATTCATTTGAGAGGGCGAAACGTCAAGCACAAGCACCCATGGCATCTAAAACTGCGAACGAAAAGCAGTTGGATGCGTTATCATCAGTGATGAAGTGTTTGGAAGCTCACAAGTTAGACCCAGCGAAAGAAGTACCAGGGTGGCAGATCAAAGAGCAAATGGCCAAGCTTGAGAAAGACATTGTTCAGCTTGACAAACAGATGGAGGAAGCGAGATCTATCAGTCGAATGGAGGAAGCGAGATCCATCAGTCGAATGGAGGAAGCGAGATCCATCAGTATAAGGGAGGAAGCGGCAATTAGCGAGAGATTGTATAACCAGCAGATGAAACGTCCAAGGTTGTCAGAAATGGAAATGCCACCAACAGCTGCCGCATCTTATTCTCCGATGTACCGCGACCACCGAAGCTTCCCTAGTCACAGAGAGGGAGATGCAGATGAAATATCAGCTCTTGTCAGTAGTTACCTCGGCCCATCATCAGGTTTTCCTCATCGGTCAGGTCTTATGAGATCCCCTGAATATATGGTTCCACCTGGTGGGTTAGGAAGAAGTGTGTCTGCGTATGATCATCTGCCTCCAAATTCTTATTCTCCGGTTCACGGACAGAGACGTCCTCAAGAGTACCCTCCTCCAGTTCATGGGCAACATCAAATGCCATATGGTCTATACAGACATTCACCATCTGTAGAAAGACACTTGGCTTTGTCCAATCACAGGACCCCTCGTAACTTATCACAAGACCGCATAGGAGGAATGTAG
Protein Sequence
  • >A03p017010.1_BraROA
    MAVRNGSLLPAPSTREEEQPSSAMIQRREAQATVETVPTNIETTIEQSNDPQFLKSIVDLTALAAAVDAFKRRYDELQSHMDYIGNAIDSNLKTNGIIETAAASPPPQNKTATAIACQSPPKEKSEAERFCESMWSKELRRYMFVNISERAKLIEEIPGALKLAKDPAKFVLDCIGKFYLQGRKAFANDLPAITARKVSLLILECYLLTFDPEGEGEKKKLLVSSVKDEAEAAAVAWKKRLVGEGWLGAAEAMDARGLLLLVACFGIPESFKSMDLLDLIRQSGTDEIVGALKRSPFLVPIMSGIVDSSFKRGMHIEALELVYTFGMEDRFSPSSILTSFLRMRKDSFERAKRQAQAPMASKTANEKQLDALSSVMKCLEAHKLDPAKEVPGWQIKEQMAKLEKDIVQLDKQMEEARSISRMEEARSISRMEEARSISIREEAAISERLYNQQMKRPRLSEMEMPPTAAASYSPMYRDHRSFPSHREGDADEISALVSSYLGPSSGFPHRSGLMRSPEYMVPPGGLGRSVSAYDHLPPNSYSPVHGQRRPQEYPPPVHGQHQMPYGLYRHSPSVERHLALSNHRTPRNLSQDRIGGM