Gene Details:
- MSU gene ID: LOC_Os10g40710
- RAPdb gene ID: Os10g0555700
- Gene Symbol: OsEXPB2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- A clear difference was observed between RNA interference (RNAi) lines and wild-type in root system architecture and plant height, and the suppression of OsEXPB2 resulted in a visible alteration of the width of the leaf blade.
- The OsEXPB2 promoter contains conserved root hair-specific elements.
- Analysis of spatial and temporal expression patterns demonstrated that OsEXPB2 was predominantly expressed in root of rice.
- All these results suggest that OsEXPB2 is a root-predominant gene with a key role in root-hair formation and has the potential to be utilized in transgenic root breeding to improve abiotic stress tolerance.
- OsEXPB2 expression levels were up-regulated by abiotic stresses, such as phosphate or iron deficiency, and also suppressed by abscisic acid.
- Subcellular localization assay revealed that OsEXPB2 was localized in the cell wall.
Function-related keywords:
- leaf , root , tolerance , abiotic-stress , stress , architecture , cell-wall , breeding , plant-height , iron , biotic-stress , abscisic-acid , stress-tolerance , phosphate , root-hair , root-system-architecture
Literature:
- OsEXPB2, a β-expansin gene, is involved in rice root system architecture . DOI: 10.1007/s11032-015-0203-y
Related News:
Gene Resources:
- NCBI ID: AK061068
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g40710.1
AAAACACAAAGCAGACAAGGTAGTAGTACAGGCTTTTGTACGTACGTAGCAGAGGGAGTTCCCAAGATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACGTACGGCTTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAACACCAACCAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGACGGCAAGGGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGGCAGCCCAGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTCGACCTGAGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGCCACGCCGGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTACGTGAACTTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTCGCCAACAAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAGCCGACGCGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCCAACCACCGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTCATCGCCCACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTCCAGTTCCGTTGATCCATCGATCGATCTACCTATGTGCATGCAATGCCTTCGTCGTCTTGTGTCGCCGGTCAAGAACGAATTTTGATTCTACCGATCGGCAGTTCGGCACTAGTACTGTACTACGATTCTGTGTGTGTGTGTGTGTGTGTGTGATTGCAATGCAAATTGCGAACGGATCAATTAAGAGCGTTTTTTTCTCTCTCTCTTTTTAATTTGTAGTTGTGTGTGTCAGCGAGATGTGTGGGAAATGGAACAGGGGCAGGGCACGCAGTATCCATGTGCTTGCTCTGAACCGCCCACATTGACAAATGACCCAATGCCAATATGCCATATATATATACCGGATTGGCAGACTTATTGTATTGTGACCAAAACCAAGTTTGTAATTGAACTGAATTAATACGGTGTGTTTGCTTATCAGA
CDS Sequence
- >LOC_Os10g40710.1
ATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACGTACGGCTTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAACACCAACCAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGACGGCAAGGGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGGCAGCCCAGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTCGACCTGAGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGCCACGCCGGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTACGTGAACTTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTCGCCAACAAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAGCCGACGCGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCCAACCACCGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTCATCGCCCACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTCCAGTTCCGTTGA
Protein Sequence
- >LOC_Os10g40710.1
MAGASAKVVAMLLSVLATYGFAAGVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSESGQTVIAHQVIPANWRANTNYGSKVQFR*