Gene Details:
- MSU gene ID: LOC_Os10g40090
- RAPdb gene ID: Os10g0548600
- Gene Symbol: OSIPA
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- As such, the OSIPA promoter seems promising for generation of stable male-sterile lines required for the production of hybrids in rice and other crop plants.
- Earlier, a pollen-specific Oryza sativa indica pollen allergen gene (OSIPA), coding for expansins/pollen allergens, was isolated from rice, and its promoter–upon expression in tobacco and Arabidopsis–was found active during the late stages of pollen development.
- Pollen-specific expression of Oryza sativa indica pollen allergen gene (OSIPA) promoter in rice and Arabidopsis transgenic systems.
- Differential screening of a stage-specific cDNA library of Indica rice has been used to identify two genes expressed in pre-pollination stage panicles, namely OSIPA and OSIPK coding for proteins similar to expansins/pollen allergens and calcium-dependent protein kinases (CDPK), respectively.
- Northern analysis and in situ hybridizations indicate that OSIPA expresses exclusively in pollen while OSIPK expresses in pollen as well as anther wall.
- Promoter of OSIPA is active during the late stages of pollen development and remains active till the anthesis, whereas, OSIPK promoter is active to a low level in developing anther till the pollen matures.
Function-related keywords:
Literature:
- Pollen-specific expression of Oryza sativa indica pollen allergen gene (OSIPA) promoter in rice and Arabidopsis transgenic systems . DOI: 10.1007/s12033-010-9347-5 ; PMID: 21061188
- Promoters of two anther-specific genes confer organ-specific gene expression in a stage-specific manner in transgenic systems . DOI: 10.1007/s00299-007-0414-8 ; PMID: 17661051
Related News:
Gene Resources:
- NCBI ID: AF220610
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g40090.1
ATCCATCTCACCACCAAAAAAAAAAGGAAAAAAAAACAAAACACACCAAGCCAAATAAAAGCGACAATGGGATCGCTCACCACCAACATCGTCCTCGCCGTCGCCGTGGTGGCAGCGCTGGTCGGCGGCGGGTCGTGCGGCCCGCCCAAGGTGCCACCCGGCCCGAACATCACGACCAACTACAACGCCCCGTGGCTCCCCGCCAGGGCCACCTGGTACGGCCAGCCCTACGGCTCCGGCTCCACCGACAATGGTGGCGCGTGCGGGATCAAGAACGTCAACCTGCCTCCCTACAACGGCATGATCTCCTGCGGCAACGTCCCAATCTTCAAGGACGGCAGGGGATGCGGCTCATGCTACGAGGTGAAGTGTGAGCAGCCGGCGGCGTGCTCGAAGCAGCCGGTGACGGTGTTCATCACGGACATGAACTACGAGCCCATCTCGGCGTACCACTTCGACTTCTCCGGCAAGGCGTTCGGCGCCATGGCTTGCCCGGGGAAGGAGACCGAGCTCCGCAAGGCCGGCATCATCGACATGCAGTTCAGGAGGGTGCGCTGCAAGTACCCCGGCGGCCAGAAGGTCACCTTCCACGTCGAGAAGGGCTCCAACCCCAACTACCTCGCCGTGCTCGTCAAGTTCGTCGCCGACGACGGTGACGTCATCCAGATGGACCTCCAGGAGGCCGGATTGCCAGCGTGGAGGCCCATGAAGCTGTCGTGGGGCGCCATCTGGAGGATGGACACCGCCACGCCACTCAAGGCACCCTTCTCCATTCGCGTCACCACCGAGTCCGGCAAGAGCCTCATCGCCAAAGACGTCATCCCGGTCAACTGGATGCCAGACGCCATCTACGTATCAAACGTCCAGTTCTATTGAGATCGGACGGAAACGATCCTCCTAATTTATTTCCCTATTAATTTGTTCAAATGGTTTCCTTCTATAACCTATATTTTTCCCGTTGTTAGAAATGGTTCCATTTCCTCCTACAGCTTACTTTAAGATAGTTGCGCTTGTATATCTGCGCCATCTTGTAAGTTGTAAGATGCTGAAGAACACTATGAATTCTGAGCATCTGATTCTCCGGGAAGATTTACTATGATAAACAACAGTTTGATTTACTATGTGTGTCCCCTTGTTTATTGTATGCTATCCTAATACTTATGAAAAGTTTTGATAAATA
CDS Sequence
- >LOC_Os10g40090.1
ATGGGATCGCTCACCACCAACATCGTCCTCGCCGTCGCCGTGGTGGCAGCGCTGGTCGGCGGCGGGTCGTGCGGCCCGCCCAAGGTGCCACCCGGCCCGAACATCACGACCAACTACAACGCCCCGTGGCTCCCCGCCAGGGCCACCTGGTACGGCCAGCCCTACGGCTCCGGCTCCACCGACAATGGTGGCGCGTGCGGGATCAAGAACGTCAACCTGCCTCCCTACAACGGCATGATCTCCTGCGGCAACGTCCCAATCTTCAAGGACGGCAGGGGATGCGGCTCATGCTACGAGGTGAAGTGTGAGCAGCCGGCGGCGTGCTCGAAGCAGCCGGTGACGGTGTTCATCACGGACATGAACTACGAGCCCATCTCGGCGTACCACTTCGACTTCTCCGGCAAGGCGTTCGGCGCCATGGCTTGCCCGGGGAAGGAGACCGAGCTCCGCAAGGCCGGCATCATCGACATGCAGTTCAGGAGGGTGCGCTGCAAGTACCCCGGCGGCCAGAAGGTCACCTTCCACGTCGAGAAGGGCTCCAACCCCAACTACCTCGCCGTGCTCGTCAAGTTCGTCGCCGACGACGGTGACGTCATCCAGATGGACCTCCAGGAGGCCGGATTGCCAGCGTGGAGGCCCATGAAGCTGTCGTGGGGCGCCATCTGGAGGATGGACACCGCCACGCCACTCAAGGCACCCTTCTCCATTCGCGTCACCACCGAGTCCGGCAAGAGCCTCATCGCCAAAGACGTCATCCCGGTCAACTGGATGCCAGACGCCATCTACGTATCAAACGTCCAGTTCTATTGA
Protein Sequence
- >LOC_Os10g40090.1
MGSLTTNIVLAVAVVAALVGGGSCGPPKVPPGPNITTNYNAPWLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKAPFSIRVTTESGKSLIAKDVIPVNWMPDAIYVSNVQFY*