Gene Details:

Functional Descriptions:

  • Here, we report on the identification of a new cyclophilin gene OsCYP-25 (LOC_Os09 g39780) from rice which found to be upregulated in response to various abiotic stresses viz.
  • These findings suggest that OsCYP-25 might perform an important function in mediating wide range of cellular response under multiple abiotic stresses.
  • Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
  • The in silico analysis showed that OsCYP-25 interacts with different proteins involved in cell growth, differentiation, ribosome biogenesis, RNA metabolism, RNA editing, gene expression, signal transduction or stress response.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os09g39780.2
    TTCCTCCTCATCAGATTGTTTCCGCCGCCGACGCGCCGATCTCCTCCTTCCAGTTCCAGCCTCCAGGCTAAGCCATGGCGAGCAAGAACCCCAAGGTGTTCTTCGACATCCTCATCGGCAAGGCCAGGGCCGGCCGCGTCGTCATGGAGCTCTTCGCCGACACCGTCCCCAAGACGGCCGAGAACTTTCGCTGCCTCTGCACCGGCGAGAAGGGCCTCGGCGCCTCCGGCAAGCCGCTGCATTACAAGGGTTCTGCCTTCCACCGTATCATACCCAACTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGACAGGTTTGCCGACGAGAACTTCAAGCTGCGCCACACCGGCCCAGGCGTGCTCTCCATGGCCAACGCAGGGCCAAACACCAACGGCTCCCAATTCTTCATCTGCACCACGCGTACCACCTGGCTCGACGGCAAGCACGTCGTTTTCGGCAAGGTCGTCGACGGATACACCGTCGTCGAGAAGATGGAGCAAGTCGGCTCCGGCTCTGGCGGCACGGCCGAGCGCGTCCTCATCGAGGACTGCGGCCAGCTCGCCGACGACCACGCCAACTGATTATATTAGATTACTTACTTACTAGAGTATATTTTCTTCCTTTTACAAGGAATTTTGTGACATTGTTCCGTTCTTCTTCTTGTATCAATAACAATCCAATGTTAGAAAACATTTATTTATAACTATGCTCTTAGCCCTCAATGTTATATAGCTATTGCCTTGCTCTGAAA
  • >LOC_Os09g39780.1
    TTCCTCCTCATCAGATTGTTTCCGCCGCCGACGCGCCGATCTCCTCCTTCCAGTTCCAGCCTCCAGGCTAAGCCATGGCGAGCAAGAACCCCAAGGTGTTCTTCGACATCCTCATCGGCAAGGCCAGGGCCGGCCGCGTCGTCATGGAGCTCTTCGCCGACACCGTCCCCAAGACGGCCGAGAACTTTCGCTGCCTCTGCACCGGCGAGAAGGGCCTCGGCGCCTCCGGCAAGCCGCTGCATTACAAGGGTTCTGCCTTCCACCGTATCATACCCAACTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGACAGGTTTGCCGACGAGAACTTCAAGCTGCGCCACACCGGCCCAGGCGTGCTCTCCATGGCCAACGCAGGGCCAAACACCAACGGCTCCCAATTCTTCATCTGCACCACGCGTACCACCTGGCTCGACGGCAAGCACGTCGTTTTCGGCAAGGTCGTCGACGGATACACCGTCGTCGAGAAGATGGAGCAAGTCGGCTCCGGCTCTGGCGGCACGGCCGAGCGCGTCCTCATCGAGGACTGCGGCCAGCTCGCCGACGACCACGCCAACTGATTATATTAGATTACTTACTTACTAGAGTATATTTTCTTCCTTTTACAAGGAATTTTGTGACATTGTTCCGTTCTTCTTCTTGTATCAATAACAATCCAATGTTAGAAAACATTTATTTATAACTATGCTCTTAGCCCTCAATGTTATATAGCTATTGCCTTGCTCTGAAA
CDS Sequence
  • >LOC_Os09g39780.2
    ATGGCGAGCAAGAACCCCAAGGTGTTCTTCGACATCCTCATCGGCAAGGCCAGGGCCGGCCGCGTCGTCATGGAGCTCTTCGCCGACACCGTCCCCAAGACGGCCGAGAACTTTCGCTGCCTCTGCACCGGCGAGAAGGGCCTCGGCGCCTCCGGCAAGCCGCTGCATTACAAGGGTTCTGCCTTCCACCGTATCATACCCAACTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGACAGGTTTGCCGACGAGAACTTCAAGCTGCGCCACACCGGCCCAGGCGTGCTCTCCATGGCCAACGCAGGGCCAAACACCAACGGCTCCCAATTCTTCATCTGCACCACGCGTACCACCTGGCTCGACGGCAAGCACGTCGTTTTCGGCAAGGTCGTCGACGGATACACCGTCGTCGAGAAGATGGAGCAAGTCGGCTCCGGCTCTGGCGGCACGGCCGAGCGCGTCCTCATCGAGGACTGCGGCCAGCTCGCCGACGACCACGCCAACTGA
  • >LOC_Os09g39780.1
    ATGGCGAGCAAGAACCCCAAGGTGTTCTTCGACATCCTCATCGGCAAGGCCAGGGCCGGCCGCGTCGTCATGGAGCTCTTCGCCGACACCGTCCCCAAGACGGCCGAGAACTTTCGCTGCCTCTGCACCGGCGAGAAGGGCCTCGGCGCCTCCGGCAAGCCGCTGCATTACAAGGGTTCTGCCTTCCACCGTATCATACCCAACTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGACAGGTTTGCCGACGAGAACTTCAAGCTGCGCCACACCGGCCCAGGCGTGCTCTCCATGGCCAACGCAGGGCCAAACACCAACGGCTCCCAATTCTTCATCTGCACCACGCGTACCACCTGGCTCGACGGCAAGCACGTCGTTTTCGGCAAGGTCGTCGACGGATACACCGTCGTCGAGAAGATGGAGCAAGTCGGCTCCGGCTCTGGCGGCACGGCCGAGCGCGTCCTCATCGAGGACTGCGGCCAGCTCGCCGACGACCACGCCAACTGA
Protein Sequence
  • >LOC_Os09g39780.2
    MASKNPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQLADDHAN*
  • >LOC_Os09g39780.1
    MASKNPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQLADDHAN*